RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 PDRG1Q9NUG6 133 aa12.27□□□□□ -0.45
MSRA-210ENST00000528246 HMG20BQ9P0W2 317 aa12.27□□□□□ -0.45
MSRA-210ENST00000528246 MTMR6Q9Y217 621 aa12.27□□□□□ -0.45
MSRA-210ENST00000528246 ABCC6O95255 1503 aa12.27□□□□□ -0.45
MSRA-210ENST00000528246 NUTM2FA1L443 756 aa12.26□□□□□ -0.45
MSRA-210ENST00000528246 SOX12O15370 315 aa12.26□□□□□ -0.45
MSRA-210ENST00000528246 CAVIN2O95810 425 aa12.26□□□□□ -0.45
MSRA-210ENST00000528246 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
MSRA-210ENST00000528246 RNF20Q5VTR2 975 aa12.26□□□□□ -0.45
MSRA-210ENST00000528246 KSR2Q6VAB6 950 aa12.26□□□□□ -0.45
MSRA-210ENST00000528246 MAP4K1Q92918 833 aa12.26□□□□□ -0.45
MSRA-210ENST00000528246 COL15A1P39059 1388 aa12.26□□□□□ -0.45
MSRA-210ENST00000528246 C1orf167Q5SNV9 1468 aa12.26□□□□□ -0.45
MSRA-210ENST00000528246 SLIT3O75094 1523 aa12.26□□□□□ -0.45
MSRA-210ENST00000528246 TCHHQ07283 1943 aa12.26□□□□□ -0.45
MSRA-210ENST00000528246 GOLGA6L6A8MZA4 724 aa12.25□□□□□ -0.45
MSRA-210ENST00000528246 FOXD4L5Q5VV16 416 aaPredicted RBP12.25□□□□□ -0.45
MSRA-210ENST00000528246 LINS1Q8NG48 757 aa12.25□□□□□ -0.45
MSRA-210ENST00000528246 FOXD4L4Q8WXT5 416 aaPredicted RBP12.25□□□□□ -0.45
MSRA-210ENST00000528246 LRRC59Q96AG4 307 aaKnown RBP12.25□□□□□ -0.45
MSRA-210ENST00000528246 ORAI2Q96SN7 254 aa12.25□□□□□ -0.45
MSRA-210ENST00000528246 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
MSRA-210ENST00000528246 CNPY2Q9Y2B0 182 aa12.25□□□□□ -0.45
MSRA-210ENST00000528246 NHSL1Q5SYE7 1610 aa12.25□□□□□ -0.45
MSRA-210ENST00000528246 GIGYF1O75420 1035 aaPredicted RBP12.25□□□□□ -0.45
MSRA-210ENST00000528246 IFIT2P09913 472 aaKnown RBP12.25□□□□□ -0.45
MSRA-210ENST00000528246 CCDC192P0DO97 292 aa12.25□□□□□ -0.45
MSRA-210ENST00000528246 TEFQ10587 303 aa12.25□□□□□ -0.45
MSRA-210ENST00000528246 NOLC1Q14978 699 aaKnown RBP eCLIP12.25□□□□□ -0.45
MSRA-210ENST00000528246 CWC27Q6UX04 472 aaKnown RBP12.25□□□□□ -0.45
MSRA-210ENST00000528246 CHAMP1Q96JM3 812 aa12.25□□□□□ -0.45
MSRA-210ENST00000528246 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
MSRA-210ENST00000528246 ADCY5O95622 1261 aa12.24□□□□□ -0.45
MSRA-210ENST00000528246 DDX58O95786 925 aaKnown RBP12.24□□□□□ -0.45
MSRA-210ENST00000528246 GJB2P29033 226 aa12.24□□□□□ -0.45
MSRA-210ENST00000528246 KRT85P78386 507 aa12.24□□□□□ -0.45
MSRA-210ENST00000528246 RBM43Q6ZSC3 357 aaKnown RBP12.24□□□□□ -0.45
MSRA-210ENST00000528246 PHF8Q9UPP1 1060 aa12.24□□□□□ -0.45
MSRA-210ENST00000528246 MED23Q9ULK4 1368 aa12.23□□□□□ -0.45
MSRA-210ENST00000528246 BTBD11A6QL63 1104 aa12.23□□□□□ -0.45
MSRA-210ENST00000528246 OS9Q13438 667 aaPredicted RBP12.23□□□□□ -0.45
MSRA-210ENST00000528246 KRT32Q14532 448 aa12.23□□□□□ -0.45
MSRA-210ENST00000528246 CREB3L3Q68CJ9 461 aa12.23□□□□□ -0.45
MSRA-210ENST00000528246 NOL8Q76FK4 1167 aaKnown RBP12.23□□□□□ -0.45
MSRA-210ENST00000528246 NECTIN2Q92692 538 aa12.23□□□□□ -0.45
MSRA-210ENST00000528246 JAKMIP1Q96N16 626 aaKnown RBP12.23□□□□□ -0.45
MSRA-210ENST00000528246 GDPD2Q9HCC8 539 aa12.23□□□□□ -0.45
MSRA-210ENST00000528246 NPHP3Q7Z494 1330 aa12.22□□□□□ -0.45
MSRA-210ENST00000528246 RNMTO43148 476 aaKnown RBP12.22□□□□□ -0.45
MSRA-210ENST00000528246 HCLS1P14317 486 aaPredicted RBP12.22□□□□□ -0.45
MSRA-210ENST00000528246 NBPF6Q5VWK0 638 aa12.22□□□□□ -0.45
MSRA-210ENST00000528246 USPL1Q5W0Q7 1092 aa12.22□□□□□ -0.45
MSRA-210ENST00000528246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.22□□□□□ -0.45
MSRA-210ENST00000528246 FAM200AQ8TCP9 573 aa12.22□□□□□ -0.45
MSRA-210ENST00000528246 NBPF4Q96M43 638 aa12.22□□□□□ -0.45
MSRA-210ENST00000528246 DDX19AQ9NUU7 478 aaKnown RBP12.22□□□□□ -0.45
MSRA-210ENST00000528246 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
MSRA-210ENST00000528246 AFF2P51816 1311 aa12.21□□□□□ -0.45
MSRA-210ENST00000528246 GRM8O00222 908 aa12.21□□□□□ -0.45
MSRA-210ENST00000528246 PTH1RQ03431 593 aa12.21□□□□□ -0.45
MSRA-210ENST00000528246 ESCO1Q5FWF5 840 aa12.21□□□□□ -0.45
MSRA-210ENST00000528246 PRPF40BQ6NWY9 871 aaKnown RBP12.21□□□□□ -0.45
MSRA-210ENST00000528246 DDX21Q9NR30 783 aaKnown RBP eCLIP12.21□□□□□ -0.45
MSRA-210ENST00000528246 SPG7Q9UQ90 795 aa12.21□□□□□ -0.45
MSRA-210ENST00000528246 RBM8AQ9Y5S9 174 aaKnown RBP12.21□□□□□ -0.45
MSRA-210ENST00000528246 FIBPO43427 364 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
MSRA-210ENST00000528246 G3BP1Q13283 466 aaKnown RBP eCLIP12.2□□□□□ -0.46
MSRA-210ENST00000528246 ME3Q16798 604 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 ZNF530Q6P9A1 599 aaPredicted RBP12.2□□□□□ -0.46
MSRA-210ENST00000528246 CCDC83Q8IWF9 413 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 KIAA1524Q8TCG1 905 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 C8orf37Q96NL8 207 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 MAP3K2Q9Y2U5 619 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 SLC27A2O14975 620 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 RPS6KB1P23443 525 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 DNM1Q05193 864 aaKnown RBP12.2□□□□□ -0.46
MSRA-210ENST00000528246 ST3GAL1Q11201 340 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 MAP3K11Q16584 847 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 ADCK5Q3MIX3 580 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 C1orf141Q5JVX7 400 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 BLOC1S2Q6QNY1 142 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 SMAP1Q8IYB5 467 aaPredicted RBP12.2□□□□□ -0.46
MSRA-210ENST00000528246 VSIG10Q8N0Z9 540 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 LGR6Q9HBX8 967 aa12.2□□□□□ -0.46
MSRA-210ENST00000528246 ADAMTS2O95450 1211 aa12.19□□□□□ -0.46
MSRA-210ENST00000528246 LARGE1O95461 756 aa12.19□□□□□ -0.46
MSRA-210ENST00000528246 MAP4K4O95819 1239 aaPredicted RBP12.19□□□□□ -0.46
MSRA-210ENST00000528246 SYCP1Q15431 976 aa12.19□□□□□ -0.46
MSRA-210ENST00000528246 LARP1BQ659C4 914 aaKnown RBP12.19□□□□□ -0.46
MSRA-210ENST00000528246 ATL3Q6DD88 541 aa12.19□□□□□ -0.46
MSRA-210ENST00000528246 LARP1Q6PKG0 1096 aaKnown RBP12.19□□□□□ -0.46
MSRA-210ENST00000528246 AACSQ86V21 672 aa12.19□□□□□ -0.46
MSRA-210ENST00000528246 NUP62CLQ9H1M0 184 aa12.19□□□□□ -0.46
MSRA-210ENST00000528246 ZSCAN16Q9H4T2 348 aaPredicted RBP12.19□□□□□ -0.46
MSRA-210ENST00000528246 FAM13BQ9NYF5 915 aa12.19□□□□□ -0.46
MSRA-210ENST00000528246 SOS2Q07890 1332 aaPredicted RBP12.18□□□□□ -0.46
MSRA-210ENST00000528246 SASH1O94885 1247 aa12.18□□□□□ -0.46
MSRA-210ENST00000528246 CHAF1AQ13111 956 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms