RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-211ENST00000528001 ANKRD31Q8N7Z5 1873 aa16.69■□□□□ 0.26
CNKSR1-211ENST00000528001 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-211ENST00000528001 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
CNKSR1-211ENST00000528001 HSP90B1P14625 803 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-211ENST00000528001 CRY2Q49AN0 593 aa16.68■□□□□ 0.26
CNKSR1-211ENST00000528001 SSH1Q8WYL5 1049 aa16.68■□□□□ 0.26
CNKSR1-211ENST00000528001 SH3TC1Q8TE82 1336 aa16.68■□□□□ 0.26
CNKSR1-211ENST00000528001 A0A0G2JLW4 131 aa16.67■□□□□ 0.26
CNKSR1-211ENST00000528001 STYK1Q6J9G0 422 aa16.67■□□□□ 0.26
CNKSR1-211ENST00000528001 DNAAF4Q8WXU2 420 aa16.67■□□□□ 0.26
CNKSR1-211ENST00000528001 N4BP2Q86UW6 1770 aaPredicted RBP16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 ABCC12Q96J65 1359 aa16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 SRGNP10124 158 aa16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 ERFEQ4G0M1 354 aa16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 C2CD5Q86YS7 1000 aa16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 ZBTB38Q8NAP3 1195 aaPredicted RBP16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 LINS1Q8NG48 757 aa16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 MASTLQ96GX5 879 aa16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 MYD88Q99836 296 aa16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 CWC25Q9NXE8 425 aaPredicted RBP16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 TRMT112Q9UI30 125 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-211ENST00000528001 PCCAP05165 728 aaPredicted RBP16.65■□□□□ 0.26
CNKSR1-211ENST00000528001 IGKV5-2P06315 115 aa16.65■□□□□ 0.26
CNKSR1-211ENST00000528001 NPR1P16066 1061 aa16.65■□□□□ 0.26
CNKSR1-211ENST00000528001 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
CNKSR1-211ENST00000528001 CNKSR1Q969H4 720 aa16.65■□□□□ 0.26
CNKSR1-211ENST00000528001 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 CHRNA5P30532 468 aa16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 HOXA10P31260 410 aaPredicted RBP16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 GPR162Q16538 588 aa16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 DALRD3Q5D0E6 543 aaKnown RBP16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 TTLL6Q8N841 843 aa16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 NLRP3Q96P20 1036 aa16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 KIF16BQ96L93 1317 aa16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 CDHR2Q9BYE9 1310 aa16.64■□□□□ 0.25
CNKSR1-211ENST00000528001 FAM177BA6PVY3 158 aa16.63■□□□□ 0.25
CNKSR1-211ENST00000528001 NEURL1BA8MQ27 555 aa16.63■□□□□ 0.25
CNKSR1-211ENST00000528001 ALDH1B1P30837 517 aa16.63■□□□□ 0.25
CNKSR1-211ENST00000528001 ARHGAP45Q92619 1136 aa16.63■□□□□ 0.25
CNKSR1-211ENST00000528001 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
CNKSR1-211ENST00000528001 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
CNKSR1-211ENST00000528001 LAMB2P55268 1798 aa16.62■□□□□ 0.25
CNKSR1-211ENST00000528001 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
CNKSR1-211ENST00000528001 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
CNKSR1-211ENST00000528001 BEND3Q5T5X7 828 aa16.62■□□□□ 0.25
CNKSR1-211ENST00000528001 GCKRQ14397 625 aa16.61■□□□□ 0.25
CNKSR1-211ENST00000528001 SF3B3Q15393 1217 aaKnown RBP16.61■□□□□ 0.25
CNKSR1-211ENST00000528001 CCDC24Q8N4L8 307 aa16.61■□□□□ 0.25
CNKSR1-211ENST00000528001 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
CNKSR1-211ENST00000528001 CRAMP1Q96RY5 1269 aa16.61■□□□□ 0.25
CNKSR1-211ENST00000528001 BCS1LQ9Y276 419 aa16.61■□□□□ 0.25
CNKSR1-211ENST00000528001 H7C1W4 665 aa16.6■□□□□ 0.25
CNKSR1-211ENST00000528001 SOGA3Q5TF21 947 aa16.6■□□□□ 0.25
CNKSR1-211ENST00000528001 UTRNP46939 3433 aa16.6■□□□□ 0.25
CNKSR1-211ENST00000528001 DDX60Q8IY21 1712 aaKnown RBP16.59■□□□□ 0.25
CNKSR1-211ENST00000528001 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
CNKSR1-211ENST00000528001 CWF19L2Q2TBE0 894 aaKnown RBP16.59■□□□□ 0.25
CNKSR1-211ENST00000528001 RPGRQ92834 1020 aaKnown RBP16.59■□□□□ 0.25
CNKSR1-211ENST00000528001 ZNF622Q969S3 477 aaKnown RBP eCLIP16.59■□□□□ 0.25
CNKSR1-211ENST00000528001 RBM17Q96I25 401 aaKnown RBP16.59■□□□□ 0.25
CNKSR1-211ENST00000528001 PLA2G12BQ9BX93 195 aa16.59■□□□□ 0.25
CNKSR1-211ENST00000528001 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
CNKSR1-211ENST00000528001 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
CNKSR1-211ENST00000528001 F6X3S4 739 aa16.58■□□□□ 0.24
CNKSR1-211ENST00000528001 IPO8O15397 1037 aaKnown RBP16.58■□□□□ 0.24
CNKSR1-211ENST00000528001 PDE8AO60658 829 aa16.58■□□□□ 0.24
CNKSR1-211ENST00000528001 GRIPAP1Q4V328 841 aa16.58■□□□□ 0.24
CNKSR1-211ENST00000528001 BCL2L13Q9BXK5 485 aa16.58■□□□□ 0.24
CNKSR1-211ENST00000528001 HCLS1P14317 486 aaPredicted RBP16.57■□□□□ 0.24
CNKSR1-211ENST00000528001 CASP7P55210 303 aa16.57■□□□□ 0.24
CNKSR1-211ENST00000528001 CC2D2BQ6DHV5 1058 aa16.57■□□□□ 0.24
CNKSR1-211ENST00000528001 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
CNKSR1-211ENST00000528001 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
CNKSR1-211ENST00000528001 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
CNKSR1-211ENST00000528001 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
CNKSR1-211ENST00000528001 RTL9Q8NET4 1388 aa16.56■□□□□ 0.24
CNKSR1-211ENST00000528001 UTYO14607 1347 aa16.56■□□□□ 0.24
CNKSR1-211ENST00000528001 SYNE4Q8N205 404 aa16.56■□□□□ 0.24
CNKSR1-211ENST00000528001 NOB1Q9ULX3 412 aaKnown RBP16.56■□□□□ 0.24
CNKSR1-211ENST00000528001 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
CNKSR1-211ENST00000528001 BBOX1O75936 387 aa16.55■□□□□ 0.24
CNKSR1-211ENST00000528001 CCT4P50991 539 aaKnown RBP16.55■□□□□ 0.24
CNKSR1-211ENST00000528001 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
CNKSR1-211ENST00000528001 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
CNKSR1-211ENST00000528001 GOLGB1Q14789 3259 aaKnown RBP16.55■□□□□ 0.24
CNKSR1-211ENST00000528001 GRM8O00222 908 aa16.54■□□□□ 0.24
CNKSR1-211ENST00000528001 CCDC152Q4G0S7 254 aa16.54■□□□□ 0.24
CNKSR1-211ENST00000528001 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
CNKSR1-211ENST00000528001 UBE3BQ7Z3V4 1068 aa16.54■□□□□ 0.24
CNKSR1-211ENST00000528001 ABCC4O15439 1325 aa16.53■□□□□ 0.24
CNKSR1-211ENST00000528001 GRAPQ13588 217 aa16.53■□□□□ 0.24
CNKSR1-211ENST00000528001 ATF7IPQ6VMQ6 1270 aa16.53■□□□□ 0.24
CNKSR1-211ENST00000528001 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
CNKSR1-211ENST00000528001 SNED1Q8TER0 1413 aa16.53■□□□□ 0.24
CNKSR1-211ENST00000528001 SLX4Q8IY92 1834 aa16.52■□□□□ 0.24
CNKSR1-211ENST00000528001 BCAR3O75815 825 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms