RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 BCS1LQ9Y276 419 aa21.14■□□□□ 0.97
SSH3-205ENST00000527821 DLEC1Q9Y238 1755 aa21.13■□□□□ 0.97
SSH3-205ENST00000527821 ZBED9Q6R2W3 1325 aa21.13■□□□□ 0.97
SSH3-205ENST00000527821 ZNF622Q969S3 477 aaKnown RBP eCLIP21.13■□□□□ 0.97
SSH3-205ENST00000527821 ZNF428Q96B54 188 aa21.13■□□□□ 0.97
SSH3-205ENST00000527821 METTL22Q9BUU2 404 aaPredicted RBP21.13■□□□□ 0.97
SSH3-205ENST00000527821 TRMT112Q9UI30 125 aaKnown RBP21.13■□□□□ 0.97
SSH3-205ENST00000527821 ADCY9O60503 1353 aa21.12■□□□□ 0.97
SSH3-205ENST00000527821 ABCC12Q96J65 1359 aa21.12■□□□□ 0.97
SSH3-205ENST00000527821 GRIN3BO60391 1043 aa21.12■□□□□ 0.97
SSH3-205ENST00000527821 COL11A2P13942 1736 aaPredicted RBP21.12■□□□□ 0.97
SSH3-205ENST00000527821 RNF123Q5XPI4 1314 aa21.11■□□□□ 0.97
SSH3-205ENST00000527821 NEXNQ0ZGT2 675 aa21.11■□□□□ 0.97
SSH3-205ENST00000527821 TRIM28Q13263 835 aaKnown RBP21.11■□□□□ 0.97
SSH3-205ENST00000527821 DALRD3Q5D0E6 543 aaKnown RBP21.11■□□□□ 0.97
SSH3-205ENST00000527821 CT47B1P0C2W7 299 aaPredicted RBP21.1■□□□□ 0.97
SSH3-205ENST00000527821 SRGNP10124 158 aa21.1■□□□□ 0.97
SSH3-205ENST00000527821 SH3TC1Q8TE82 1336 aa21.09■□□□□ 0.97
SSH3-205ENST00000527821 TNRC6CQ9HCJ0 1690 aaKnown RBP21.09■□□□□ 0.97
SSH3-205ENST00000527821 TTLL6Q8N841 843 aa21.09■□□□□ 0.97
SSH3-205ENST00000527821 CCDC191Q8NCU4 936 aa21.09■□□□□ 0.97
SSH3-205ENST00000527821 SSH1Q8WYL5 1049 aa21.09■□□□□ 0.97
SSH3-205ENST00000527821 MASTLQ96GX5 879 aa21.09■□□□□ 0.97
SSH3-205ENST00000527821 BCL2L13Q9BXK5 485 aa21.09■□□□□ 0.97
SSH3-205ENST00000527821 RIC1Q4ADV7 1423 aa21.08■□□□□ 0.97
SSH3-205ENST00000527821 STYK1Q6J9G0 422 aa21.08■□□□□ 0.97
SSH3-205ENST00000527821 SYNE4Q8N205 404 aa21.08■□□□□ 0.97
SSH3-205ENST00000527821 MRPL50Q8N5N7 158 aaKnown RBP21.08■□□□□ 0.97
SSH3-205ENST00000527821 DNAAF4Q8WXU2 420 aa21.08■□□□□ 0.97
SSH3-205ENST00000527821 CWC25Q9NXE8 425 aaPredicted RBP21.08■□□□□ 0.97
SSH3-205ENST00000527821 ARFGEF1Q9Y6D6 1849 aa21.07■□□□□ 0.96
SSH3-205ENST00000527821 KLRG2A4D1S0 409 aaPredicted RBP21.07■□□□□ 0.96
SSH3-205ENST00000527821 NPR1P16066 1061 aa21.07■□□□□ 0.96
SSH3-205ENST00000527821 ALDH1L2Q3SY69 923 aa21.07■□□□□ 0.96
SSH3-205ENST00000527821 RTL5Q5HYW3 569 aaPredicted RBP21.07■□□□□ 0.96
SSH3-205ENST00000527821 SLC10A5Q5PT55 438 aa21.07■□□□□ 0.96
SSH3-205ENST00000527821 FAM89AQ96GI7 184 aa21.07■□□□□ 0.96
SSH3-205ENST00000527821 NLRP3Q96P20 1036 aa21.07■□□□□ 0.96
SSH3-205ENST00000527821 SMC4Q9NTJ3 1288 aa21.07■□□□□ 0.96
SSH3-205ENST00000527821 CACNA1SQ13698 1873 aa21.07■□□□□ 0.96
SSH3-205ENST00000527821 GOLGB1Q14789 3259 aaKnown RBP21.07■□□□□ 0.96
SSH3-205ENST00000527821 F6X3S4 739 aa21.06■□□□□ 0.96
SSH3-205ENST00000527821 HCLS1P14317 486 aaPredicted RBP21.06■□□□□ 0.96
SSH3-205ENST00000527821 CNKSR1Q969H4 720 aa21.06■□□□□ 0.96
SSH3-205ENST00000527821 IGKV5-2P06315 115 aa21.05■□□□□ 0.96
SSH3-205ENST00000527821 CWF19L2Q2TBE0 894 aaKnown RBP21.05■□□□□ 0.96
SSH3-205ENST00000527821 ZBTB38Q8NAP3 1195 aaPredicted RBP21.05■□□□□ 0.96
SSH3-205ENST00000527821 RPGRQ92834 1020 aaKnown RBP21.05■□□□□ 0.96
SSH3-205ENST00000527821 CRY2Q49AN0 593 aa21.04■□□□□ 0.96
SSH3-205ENST00000527821 NEURL1BA8MQ27 555 aa21.03■□□□□ 0.96
SSH3-205ENST00000527821 PCCAP05165 728 aaPredicted RBP21.03■□□□□ 0.96
SSH3-205ENST00000527821 ARHGAP27Q6ZUM4 889 aa21.03■□□□□ 0.96
SSH3-205ENST00000527821 C3orf67Q6ZVT6 689 aa21.03■□□□□ 0.96
SSH3-205ENST00000527821 LINS1Q8NG48 757 aa21.03■□□□□ 0.96
SSH3-205ENST00000527821 DDX60Q8IY21 1712 aaKnown RBP21.03■□□□□ 0.96
SSH3-205ENST00000527821 IRS4O14654 1257 aaPredicted RBP21.02■□□□□ 0.96
SSH3-205ENST00000527821 ALDH1B1P30837 517 aa21.02■□□□□ 0.96
SSH3-205ENST00000527821 PRPF40BQ6NWY9 871 aaKnown RBP21.02■□□□□ 0.96
SSH3-205ENST00000527821 SLC4A10Q6U841 1118 aa21.02■□□□□ 0.96
SSH3-205ENST00000527821 JARID2Q92833 1246 aaPredicted RBP21.02■□□□□ 0.96
SSH3-205ENST00000527821 ZNF219Q9P2Y4 722 aaPredicted RBP21.02■□□□□ 0.96
SSH3-205ENST00000527821 UTRNP46939 3433 aa21.02■□□□□ 0.96
SSH3-205ENST00000527821 LAMB2P55268 1798 aa21.02■□□□□ 0.96
SSH3-205ENST00000527821 CHD4Q14839 1912 aa21.02■□□□□ 0.95
SSH3-205ENST00000527821 PTPRCP08575 1304 aa21.02■□□□□ 0.95
SSH3-205ENST00000527821 HSP90B1P14625 803 aaKnown RBP21.01■□□□□ 0.95
SSH3-205ENST00000527821 RARSP54136 660 aaKnown RBP21.01■□□□□ 0.95
SSH3-205ENST00000527821 RBM17Q96I25 401 aaKnown RBP21.01■□□□□ 0.95
SSH3-205ENST00000527821 SLX4Q8IY92 1834 aa21.01■□□□□ 0.95
SSH3-205ENST00000527821 C21orf2O43822 256 aa21■□□□□ 0.95
SSH3-205ENST00000527821 HOXA10P31260 410 aaPredicted RBP20.99■□□□□ 0.95
SSH3-205ENST00000527821 GCKRQ14397 625 aa20.99■□□□□ 0.95
SSH3-205ENST00000527821 BEND3Q5T5X7 828 aa20.99■□□□□ 0.95
SSH3-205ENST00000527821 CRAMP1Q96RY5 1269 aa20.98■□□□□ 0.95
SSH3-205ENST00000527821 PDE8AO60658 829 aa20.97■□□□□ 0.95
SSH3-205ENST00000527821 BRPF1P55201 1214 aaPredicted RBP20.97■□□□□ 0.95
SSH3-205ENST00000527821 DDX46Q7L014 1031 aaKnown RBP20.97■□□□□ 0.95
SSH3-205ENST00000527821 UBE3BQ7Z3V4 1068 aa20.97■□□□□ 0.95
SSH3-205ENST00000527821 SRCIN1Q9C0H9 1055 aa20.97■□□□□ 0.95
SSH3-205ENST00000527821 NOB1Q9ULX3 412 aaKnown RBP20.97■□□□□ 0.95
SSH3-205ENST00000527821 CDHR2Q9BYE9 1310 aa20.97■□□□□ 0.95
SSH3-205ENST00000527821 H7C1W4 665 aa20.96■□□□□ 0.95
SSH3-205ENST00000527821 YY1P25490 414 aa20.96■□□□□ 0.95
SSH3-205ENST00000527821 SOGA3Q5TF21 947 aa20.96■□□□□ 0.95
SSH3-205ENST00000527821 KIF16BQ96L93 1317 aa20.96■□□□□ 0.95
SSH3-205ENST00000527821 SF3B3Q15393 1217 aaKnown RBP20.95■□□□□ 0.94
SSH3-205ENST00000527821 ABCC4O15439 1325 aa20.95■□□□□ 0.94
SSH3-205ENST00000527821 BCAR3O75815 825 aa20.94■□□□□ 0.94
SSH3-205ENST00000527821 ALDH1L1O75891 902 aa20.94■□□□□ 0.94
SSH3-205ENST00000527821 C7orf43Q8WVR3 580 aa20.94■□□□□ 0.94
SSH3-205ENST00000527821 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
SSH3-205ENST00000527821 PPEF1O14829 653 aaPredicted RBP20.93■□□□□ 0.94
SSH3-205ENST00000527821 RASSF7Q02833 373 aa20.93■□□□□ 0.94
SSH3-205ENST00000527821 CCDC93Q567U6 631 aa20.93■□□□□ 0.94
SSH3-205ENST00000527821 API5Q9BZZ5 524 aaKnown RBP20.93■□□□□ 0.94
SSH3-205ENST00000527821 C9orf78Q9NZ63 289 aaPredicted RBP20.93■□□□□ 0.94
SSH3-205ENST00000527821 GRM8O00222 908 aa20.92■□□□□ 0.94
SSH3-205ENST00000527821 CTSWP56202 376 aa20.92■□□□□ 0.94
SSH3-205ENST00000527821 GRAPQ13588 217 aa20.92■□□□□ 0.94
SSH3-205ENST00000527821 CCDC152Q4G0S7 254 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms