RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 EIF2S2P20042 333 aaKnown RBP8.9□□□□□ -0.98
PPFIA1-209ENST00000527612 SUSD4Q5VX71 490 aa8.9□□□□□ -0.98
PPFIA1-209ENST00000527612 TPTE2Q6XPS3 522 aa8.9□□□□□ -0.98
PPFIA1-209ENST00000527612 NECTIN2Q92692 538 aa8.9□□□□□ -0.98
PPFIA1-209ENST00000527612 NYXQ9GZU5 481 aa8.9□□□□□ -0.98
PPFIA1-209ENST00000527612 DDX21Q9NR30 783 aaKnown RBP eCLIP8.9□□□□□ -0.98
PPFIA1-209ENST00000527612 SCN9AQ15858 1988 aa8.9□□□□□ -0.99
PPFIA1-209ENST00000527612 RNF123Q5XPI4 1314 aa8.89□□□□□ -0.99
PPFIA1-209ENST00000527612 GLTPD2A6NH11 291 aa8.89□□□□□ -0.99
PPFIA1-209ENST00000527612 HOXA10P31260 410 aaPredicted RBP8.89□□□□□ -0.99
PPFIA1-209ENST00000527612 ZEB1P37275 1124 aaPredicted RBP8.89□□□□□ -0.99
PPFIA1-209ENST00000527612 CCDC93Q567U6 631 aa8.89□□□□□ -0.99
PPFIA1-209ENST00000527612 SOGA3Q5TF21 947 aa8.89□□□□□ -0.99
PPFIA1-209ENST00000527612 HDGFL1Q5TGJ6 251 aa8.89□□□□□ -0.99
PPFIA1-209ENST00000527612 RBM46Q8TBY0 533 aaKnown RBP8.89□□□□□ -0.99
PPFIA1-209ENST00000527612 XAGE3Q8WTP9 111 aa8.89□□□□□ -0.99
PPFIA1-209ENST00000527612 IFT57Q9NWB7 429 aa8.89□□□□□ -0.99
PPFIA1-209ENST00000527612 THSD7BQ9C0I4 1608 aa8.88□□□□□ -0.99
PPFIA1-209ENST00000527612 ZNF541Q9H0D2 1346 aa8.88□□□□□ -0.99
PPFIA1-209ENST00000527612 TRPM7Q96QT4 1865 aa8.88□□□□□ -0.99
PPFIA1-209ENST00000527612 POTECB2RU33 542 aa8.88□□□□□ -0.99
PPFIA1-209ENST00000527612 PARP10Q53GL7 1025 aa8.88□□□□□ -0.99
PPFIA1-209ENST00000527612 COPS6Q7L5N1 327 aa8.88□□□□□ -0.99
PPFIA1-209ENST00000527612 NLRP10Q86W26 655 aa8.88□□□□□ -0.99
PPFIA1-209ENST00000527612 LAS1LQ9Y4W2 734 aaKnown RBP8.88□□□□□ -0.99
PPFIA1-209ENST00000527612 ABCC4O15439 1325 aa8.87□□□□□ -0.99
PPFIA1-209ENST00000527612 FKBP4Q02790 459 aaKnown RBP eCLIP8.87□□□□□ -0.99
PPFIA1-209ENST00000527612 DUSP27Q5VZP5 1158 aa8.87□□□□□ -0.99
PPFIA1-209ENST00000527612 AIMP1Q12904 312 aaKnown RBP8.86□□□□□ -0.99
PPFIA1-209ENST00000527612 SYNE4Q8N205 404 aa8.86□□□□□ -0.99
PPFIA1-209ENST00000527612 PSMD1Q99460 953 aa8.86□□□□□ -0.99
PPFIA1-209ENST00000527612 RRAGCQ9HB90 399 aa8.86□□□□□ -0.99
PPFIA1-209ENST00000527612 ZNF277Q9NRM2 450 aaPredicted RBP8.86□□□□□ -0.99
PPFIA1-209ENST00000527612 DBF4Q9UBU7 674 aaPredicted RBP8.86□□□□□ -0.99
PPFIA1-209ENST00000527612 ZNF316A6NFI3 1004 aaPredicted RBP8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 PPEF1O14829 653 aaPredicted RBP8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 GTF2E1P29083 439 aaPredicted RBP8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 ALDH1B1P30837 517 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 GNAI1P63096 354 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 FSTL1Q12841 308 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 TCIRG1Q13488 830 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 CCDC27Q2M243 656 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 HSP90AB3PQ58FF7 597 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 SLC10A5Q5PT55 438 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 PPP1R42Q7Z4L9 355 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 C8orf58Q8NAV2 365 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 PLBD2Q8NHP8 589 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 RPGRQ92834 1020 aaKnown RBP8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 TSR2Q969E8 191 aaKnown RBP8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 L3MBTL3Q96JM7 780 aaPredicted RBP8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 CRAMP1Q96RY5 1269 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 ISCA1Q9BUE6 129 aa8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 UTP14AQ9BVJ6 771 aaKnown RBP8.85□□□□□ -0.99
PPFIA1-209ENST00000527612 SH3TC1Q8TE82 1336 aa8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 POTEIP0CG38 1075 aa8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 POTEJP0CG39 1038 aa8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 HCLS1P14317 486 aaPredicted RBP8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 VEGFAP15692 232 aaPredicted RBP8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 IARSP41252 1262 aaKnown RBP8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 APLP1P51693 650 aa8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 CALD1Q05682 793 aaKnown RBP8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 WWC1Q8IX03 1113 aa8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 RTKN2Q8IZC4 609 aa8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 TSPYL6Q8N831 410 aa8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 ZNF428Q96B54 188 aa8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 MRS2Q9HD23 443 aa8.84□□□□□ -0.99
PPFIA1-209ENST00000527612 FANCIQ9NVI1 1328 aa8.83□□□□□ -1
PPFIA1-209ENST00000527612 FZD9O00144 591 aa8.83□□□□□ -1
PPFIA1-209ENST00000527612 DDNO94850 711 aaPredicted RBP8.83□□□□□ -1
PPFIA1-209ENST00000527612 HTRA3P83110 453 aa8.83□□□□□ -1
PPFIA1-209ENST00000527612 C16orf71Q8IYS4 520 aaPredicted RBP8.83□□□□□ -1
PPFIA1-209ENST00000527612 DNAJC5GQ8N7S2 189 aa8.83□□□□□ -1
PPFIA1-209ENST00000527612 SMC1BQ8NDV3 1235 aa8.83□□□□□ -1
PPFIA1-209ENST00000527612 PHAXQ9H814 394 aaKnown RBP8.83□□□□□ -1
PPFIA1-209ENST00000527612 HYPKQ9NX55 129 aa8.83□□□□□ -1
PPFIA1-209ENST00000527612 TRMT112Q9UI30 125 aaKnown RBP8.83□□□□□ -1
PPFIA1-209ENST00000527612 ARAP2Q8WZ64 1704 aa8.83□□□□□ -1
PPFIA1-209ENST00000527612 IL16Q14005 1332 aa8.82□□□□□ -1
PPFIA1-209ENST00000527612 ATP5J2-PTCD1G3V325 749 aa8.82□□□□□ -1
PPFIA1-209ENST00000527612 ELL2O00472 640 aaPredicted RBP8.82□□□□□ -1
PPFIA1-209ENST00000527612 NCBP3Q53F19 620 aaKnown RBP8.82□□□□□ -1
PPFIA1-209ENST00000527612 CC2D2BQ6DHV5 1058 aa8.82□□□□□ -1
PPFIA1-209ENST00000527612 ANKRD13DQ6ZTN6 518 aa8.82□□□□□ -1
PPFIA1-209ENST00000527612 RBM17Q96I25 401 aaKnown RBP8.82□□□□□ -1
PPFIA1-209ENST00000527612 NLRP3Q96P20 1036 aa8.82□□□□□ -1
PPFIA1-209ENST00000527612 ATP6V0A2Q9Y487 856 aa8.82□□□□□ -1
PPFIA1-209ENST00000527612 TRIM28Q13263 835 aaKnown RBP8.81□□□□□ -1
PPFIA1-209ENST00000527612 FAM89AQ96GI7 184 aa8.81□□□□□ -1
PPFIA1-209ENST00000527612 RTFDC1Q9BY42 306 aaPredicted RBP8.81□□□□□ -1
PPFIA1-209ENST00000527612 TAF1DQ9H5J8 278 aaPredicted RBP8.81□□□□□ -1
PPFIA1-209ENST00000527612 ECM29Q5VYK3 1845 aa8.81□□□□□ -1
PPFIA1-209ENST00000527612 POLR2AP24928 1970 aaKnown RBP8.81□□□□□ -1
PPFIA1-209ENST00000527612 TCERG1O14776 1098 aaKnown RBP8.8□□□□□ -1
PPFIA1-209ENST00000527612 ANP32CO43423 234 aa8.8□□□□□ -1
PPFIA1-209ENST00000527612 SCNN1DP51172 638 aa8.8□□□□□ -1
PPFIA1-209ENST00000527612 GOLGA2Q08379 1002 aa8.8□□□□□ -1
PPFIA1-209ENST00000527612 GRAPQ13588 217 aa8.8□□□□□ -1
PPFIA1-209ENST00000527612 GRIPAP1Q4V328 841 aa8.8□□□□□ -1
PPFIA1-209ENST00000527612 DPY19L2Q6NUT2 758 aa8.8□□□□□ -1
PPFIA1-209ENST00000527612 GPC2Q8N158 579 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms