RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 F13A1P00488 732 aa14.95□□□□□ -0.02
CAPN1-208ENST00000527323 AIMP1Q12904 312 aaKnown RBP14.95□□□□□ -0.02
CAPN1-208ENST00000527323 RUFY3Q7L099 469 aa14.95□□□□□ -0.02
CAPN1-208ENST00000527323 CCDC83Q8IWF9 413 aa14.95□□□□□ -0.02
CAPN1-208ENST00000527323 DCCP43146 1447 aa14.95□□□□□ -0.02
CAPN1-208ENST00000527323 KIF1BPQ96EK5 621 aa14.95□□□□□ -0.02
CAPN1-208ENST00000527323 DIAPH3Q9NSV4 1193 aa14.95□□□□□ -0.02
CAPN1-208ENST00000527323 RPAP1Q9BWH6 1393 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-208ENST00000527323 EPB41L2O43491 1005 aaKnown RBP14.94□□□□□ -0.02
CAPN1-208ENST00000527323 KDM4AO75164 1064 aa14.94□□□□□ -0.02
CAPN1-208ENST00000527323 HMGN5P82970 282 aaKnown RBP14.94□□□□□ -0.02
CAPN1-208ENST00000527323 TAF7Q15545 349 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-208ENST00000527323 TMEM87AQ8NBN3 555 aa14.94□□□□□ -0.02
CAPN1-208ENST00000527323 VPS37CA5D8V6 355 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-208ENST00000527323 CHMP3Q9Y3E7 222 aa14.94□□□□□ -0.02
CAPN1-208ENST00000527323 CAMTA1Q9Y6Y1 1673 aa14.94□□□□□ -0.02
CAPN1-208ENST00000527323 MEGF6O75095 1541 aa14.94□□□□□ -0.02
CAPN1-208ENST00000527323 DNM1Q05193 864 aaKnown RBP14.94□□□□□ -0.02
CAPN1-208ENST00000527323 PI4K2BQ8TCG2 481 aa14.94□□□□□ -0.02
CAPN1-208ENST00000527323 PRIMPOLQ96LW4 560 aa14.94□□□□□ -0.02
CAPN1-208ENST00000527323 LSG1Q9H089 658 aaKnown RBP14.94□□□□□ -0.02
CAPN1-208ENST00000527323 RNMTO43148 476 aaKnown RBP14.93□□□□□ -0.02
CAPN1-208ENST00000527323 GJB2P29033 226 aa14.93□□□□□ -0.02
CAPN1-208ENST00000527323 SPC24Q8NBT2 197 aa14.93□□□□□ -0.02
CAPN1-208ENST00000527323 IL17RAQ96F46 866 aa14.93□□□□□ -0.02
CAPN1-208ENST00000527323 JAKMIP1Q96N16 626 aaKnown RBP14.93□□□□□ -0.02
CAPN1-208ENST00000527323 TTC14Q96N46 770 aa14.93□□□□□ -0.02
CAPN1-208ENST00000527323 HTATSF1O43719 755 aaKnown RBP14.93□□□□□ -0.02
CAPN1-208ENST00000527323 MYL6BP14649 208 aa14.93□□□□□ -0.02
CAPN1-208ENST00000527323 PDRG1Q9NUG6 133 aa14.93□□□□□ -0.02
CAPN1-208ENST00000527323 FAM177BA6PVY3 158 aa14.92□□□□□ -0.02
CAPN1-208ENST00000527323 KCNJ4P48050 445 aa14.92□□□□□ -0.02
CAPN1-208ENST00000527323 PROSER3Q2NL68 480 aa14.92□□□□□ -0.02
CAPN1-208ENST00000527323 ACSBG1Q96GR2 724 aa14.92□□□□□ -0.02
CAPN1-208ENST00000527323 PRDM10Q9NQV6 1147 aa14.92□□□□□ -0.02
CAPN1-208ENST00000527323 LARGE1O95461 756 aa14.91□□□□□ -0.02
CAPN1-208ENST00000527323 NBPF7P0C2Y1 421 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-208ENST00000527323 PRPF40BQ6NWY9 871 aaKnown RBP14.91□□□□□ -0.02
CAPN1-208ENST00000527323 RUFY2Q8WXA3 655 aa14.91□□□□□ -0.02
CAPN1-208ENST00000527323 ROBO1Q9Y6N7 1651 aa14.91□□□□□ -0.02
CAPN1-208ENST00000527323 KCNQ4P56696 695 aa14.91□□□□□ -0.02
CAPN1-208ENST00000527323 AKAP4Q5JQC9 854 aa14.91□□□□□ -0.02
CAPN1-208ENST00000527323 NGLY1Q96IV0 654 aa14.91□□□□□ -0.02
CAPN1-208ENST00000527323 ALS2Q96Q42 1657 aa14.9□□□□□ -0.02
CAPN1-208ENST00000527323 CYP46A1Q9Y6A2 500 aa14.9□□□□□ -0.02
CAPN1-208ENST00000527323 PHKG2P15735 406 aa14.9□□□□□ -0.02
CAPN1-208ENST00000527323 HSP90AB4PQ58FF6 505 aa14.9□□□□□ -0.02
CAPN1-208ENST00000527323 CHPF2Q9P2E5 772 aa14.9□□□□□ -0.02
CAPN1-208ENST00000527323 KIF3AQ9Y496 699 aa14.9□□□□□ -0.02
CAPN1-208ENST00000527323 GLRX3O76003 335 aaKnown RBP14.89□□□□□ -0.03
CAPN1-208ENST00000527323 CHAF1AQ13111 956 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-208ENST00000527323 POLA2Q14181 598 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 CLASRPQ8N2M8 674 aaKnown RBP14.89□□□□□ -0.03
CAPN1-208ENST00000527323 NECAB1Q8N987 351 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 CCDC94Q9BW85 323 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-208ENST00000527323 HYPKQ9NX55 129 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 WDR17Q8IZU2 1322 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 PI4KAP2A4QPH2 592 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 CCDC192P0DO97 292 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 HSPA1LP34931 641 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 PTH1RQ03431 593 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 ADCK5Q3MIX3 580 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 PI4KAP1Q8N8J0 262 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 MTMR6Q9Y217 621 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 RGPD1P0DJD0 1748 aa14.89□□□□□ -0.03
CAPN1-208ENST00000527323 ZCRB1Q8TBF4 217 aaKnown RBP14.89□□□□□ -0.03
CAPN1-208ENST00000527323 ZSCAN31Q96LW9 406 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-208ENST00000527323 KIF1AQ12756 1690 aa14.88□□□□□ -0.03
CAPN1-208ENST00000527323 SLIT3O75094 1523 aa14.88□□□□□ -0.03
CAPN1-208ENST00000527323 GOLGA6L6A8MZA4 724 aa14.88□□□□□ -0.03
CAPN1-208ENST00000527323 ZKSCAN1P17029 563 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-208ENST00000527323 FERMT3Q86UX7 667 aa14.88□□□□□ -0.03
CAPN1-208ENST00000527323 IFIT2P09913 472 aaKnown RBP14.88□□□□□ -0.03
CAPN1-208ENST00000527323 CAMK4Q16566 473 aa14.88□□□□□ -0.03
CAPN1-208ENST00000527323 LARP1BQ659C4 914 aaKnown RBP14.88□□□□□ -0.03
CAPN1-208ENST00000527323 TCHHQ07283 1943 aa14.88□□□□□ -0.03
CAPN1-208ENST00000527323 LTBP4Q8N2S1 1624 aa14.87□□□□□ -0.03
CAPN1-208ENST00000527323 GOLGA6L4A6NEF3 574 aa14.87□□□□□ -0.03
CAPN1-208ENST00000527323 CABP4P57796 275 aa14.87□□□□□ -0.03
CAPN1-208ENST00000527323 DNAAF4Q8WXU2 420 aa14.87□□□□□ -0.03
CAPN1-208ENST00000527323 ZNF496Q96IT1 587 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-208ENST00000527323 SH2B1Q9NRF2 756 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-208ENST00000527323 IL2RBP14784 551 aa14.87□□□□□ -0.03
CAPN1-208ENST00000527323 FAM98CQ17RN3 349 aaKnown RBP14.87□□□□□ -0.03
CAPN1-208ENST00000527323 VPS53Q5VIR6 699 aa14.87□□□□□ -0.03
CAPN1-208ENST00000527323 SMAP1Q8IYB5 467 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-208ENST00000527323 USP16Q9Y5T5 823 aa14.87□□□□□ -0.03
CAPN1-208ENST00000527323 DRC7Q8IY82 874 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 IFNL2Q8IZJ0 200 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 GPATCH3Q96I76 525 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 PYCARDQ9ULZ3 195 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 AP5Z1O43299 807 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 EIF4A1P60842 406 aaKnown RBP14.86□□□□□ -0.03
CAPN1-208ENST00000527323 AMOTQ4VCS5 1084 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 SMIM5Q71RC9 77 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 SPTLC3Q9NUV7 552 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 TPM3P06753 285 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 CBX1P83916 185 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 FAM173BQ6P4H8 233 aa14.86□□□□□ -0.03
CAPN1-208ENST00000527323 FUCA2Q9BTY2 467 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms