RNA–Protein interactions for RNA: ENST00000527029.1

ALKBH3-203, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 2

Gene ALKBH3, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-203ENST00000527029 EPS15P42566 896 aa20.32■□□□□ 0.84
ALKBH3-203ENST00000527029 TPTE2Q6XPS3 522 aa20.32■□□□□ 0.84
ALKBH3-203ENST00000527029 SNED1Q8TER0 1413 aa20.32■□□□□ 0.84
ALKBH3-203ENST00000527029 GNAT3A8MTJ3 354 aa20.31■□□□□ 0.84
ALKBH3-203ENST00000527029 ALDH1B1P30837 517 aa20.31■□□□□ 0.84
ALKBH3-203ENST00000527029 SCNN1DP51172 638 aa20.31■□□□□ 0.84
ALKBH3-203ENST00000527029 EIF6P56537 245 aaKnown RBP20.31■□□□□ 0.84
ALKBH3-203ENST00000527029 PSMD1Q99460 953 aa20.31■□□□□ 0.84
ALKBH3-203ENST00000527029 ZNF652Q9Y2D9 606 aa20.31■□□□□ 0.84
ALKBH3-203ENST00000527029 USP16Q9Y5T5 823 aa20.31■□□□□ 0.84
ALKBH3-203ENST00000527029 DIAPH1O60610 1272 aaKnown RBP20.3■□□□□ 0.84
ALKBH3-203ENST00000527029 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
ALKBH3-203ENST00000527029 NIP7Q9Y221 180 aaKnown RBP eCLIP20.3■□□□□ 0.84
ALKBH3-203ENST00000527029 FAM177BA6PVY3 158 aa20.29■□□□□ 0.84
ALKBH3-203ENST00000527029 CA12O43570 354 aa20.28■□□□□ 0.84
ALKBH3-203ENST00000527029 USP50Q70EL3 339 aaPredicted RBP20.28■□□□□ 0.84
ALKBH3-203ENST00000527029 PRAMEF22A3QJZ6 481 aa20.27■□□□□ 0.84
ALKBH3-203ENST00000527029 GAS2L2Q8NHY3 880 aa20.27■□□□□ 0.84
ALKBH3-203ENST00000527029 BTBD11A6QL63 1104 aa20.26■□□□□ 0.83
ALKBH3-203ENST00000527029 DGKZQ13574 1117 aa20.26■□□□□ 0.83
ALKBH3-203ENST00000527029 SAPCD2Q86UD0 394 aa20.26■□□□□ 0.83
ALKBH3-203ENST00000527029 CEMIPQ8WUJ3 1361 aa20.25■□□□□ 0.83
ALKBH3-203ENST00000527029 GTF2E1P29083 439 aaPredicted RBP20.24■□□□□ 0.83
ALKBH3-203ENST00000527029 BRPF1P55201 1214 aaPredicted RBP20.24■□□□□ 0.83
ALKBH3-203ENST00000527029 HNRNPUQ00839 825 aaKnown RBP eCLIP20.24■□□□□ 0.83
ALKBH3-203ENST00000527029 CRY2Q49AN0 593 aa20.24■□□□□ 0.83
ALKBH3-203ENST00000527029 CC2D2BQ6DHV5 1058 aa20.24■□□□□ 0.83
ALKBH3-203ENST00000527029 LARGE2Q8N3Y3 721 aa20.24■□□□□ 0.83
ALKBH3-203ENST00000527029 NBPF26B4DH59 902 aa20.23■□□□□ 0.83
ALKBH3-203ENST00000527029 RGL2O15211 777 aa20.23■□□□□ 0.83
ALKBH3-203ENST00000527029 CELF2O95319 508 aaKnown RBP20.23■□□□□ 0.83
ALKBH3-203ENST00000527029 NBPF10Q6P3W6 841 aaKnown RBP20.23■□□□□ 0.83
ALKBH3-203ENST00000527029 FAM9BQ8IZU0 186 aa20.23■□□□□ 0.83
ALKBH3-203ENST00000527029 NBPF15Q8N660 670 aa20.23■□□□□ 0.83
ALKBH3-203ENST00000527029 HLFQ16534 295 aa20.22■□□□□ 0.83
ALKBH3-203ENST00000527029 CIAPIN1Q6FI81 312 aa20.22■□□□□ 0.83
ALKBH3-203ENST00000527029 SLC51AQ86UW1 340 aa20.22■□□□□ 0.83
ALKBH3-203ENST00000527029 ABCC12Q96J65 1359 aa20.21■□□□□ 0.83
ALKBH3-203ENST00000527029 U2SURPO15042 1029 aaKnown RBP20.21■□□□□ 0.83
ALKBH3-203ENST00000527029 SNRPA1P09661 255 aaKnown RBP20.21■□□□□ 0.83
ALKBH3-203ENST00000527029 CC2D1BQ5T0F9 858 aaKnown RBP20.21■□□□□ 0.83
ALKBH3-203ENST00000527029 HHIPL1Q96JK4 782 aa20.21■□□□□ 0.83
ALKBH3-203ENST00000527029 ADARB2Q9NS39 739 aaKnown RBP20.21■□□□□ 0.83
ALKBH3-203ENST00000527029 NUTM1Q86Y26 1132 aa20.2■□□□□ 0.82
ALKBH3-203ENST00000527029 GLIS2Q9BZE0 524 aaPredicted RBP20.2■□□□□ 0.82
ALKBH3-203ENST00000527029 GPRC5DQ9NZD1 345 aa20.2■□□□□ 0.82
ALKBH3-203ENST00000527029 GRIPAP1Q4V328 841 aa20.19■□□□□ 0.82
ALKBH3-203ENST00000527029 NIM1KQ8IY84 436 aa20.19■□□□□ 0.82
ALKBH3-203ENST00000527029 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
ALKBH3-203ENST00000527029 HOXA10P31260 410 aaPredicted RBP20.18■□□□□ 0.82
ALKBH3-203ENST00000527029 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
ALKBH3-203ENST00000527029 PNISRQ8TF01 805 aaKnown RBP20.18■□□□□ 0.82
ALKBH3-203ENST00000527029 RPGRQ92834 1020 aaKnown RBP20.18■□□□□ 0.82
ALKBH3-203ENST00000527029 ZIC5Q96T25 663 aa20.18■□□□□ 0.82
ALKBH3-203ENST00000527029 PHACTR3Q96KR7 559 aa20.17■□□□□ 0.82
ALKBH3-203ENST00000527029 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
ALKBH3-203ENST00000527029 ZBED9Q6R2W3 1325 aa20.17■□□□□ 0.82
ALKBH3-203ENST00000527029 TCERG1O14776 1098 aaKnown RBP20.16■□□□□ 0.82
ALKBH3-203ENST00000527029 PPIP5K2O43314 1243 aa20.16■□□□□ 0.82
ALKBH3-203ENST00000527029 ZNF408Q9H9D4 720 aa20.16■□□□□ 0.82
ALKBH3-203ENST00000527029 PGAP2Q9UHJ9 254 aa20.16■□□□□ 0.82
ALKBH3-203ENST00000527029 SOX10P56693 466 aa20.15■□□□□ 0.82
ALKBH3-203ENST00000527029 CXCL9Q07325 125 aa20.15■□□□□ 0.82
ALKBH3-203ENST00000527029 AOC3Q16853 763 aa20.15■□□□□ 0.82
ALKBH3-203ENST00000527029 RIC1Q4ADV7 1423 aa20.14■□□□□ 0.81
ALKBH3-203ENST00000527029 PPEF1O14829 653 aaPredicted RBP20.14■□□□□ 0.81
ALKBH3-203ENST00000527029 GMPSP49915 693 aaPredicted RBP20.14■□□□□ 0.81
ALKBH3-203ENST00000527029 NOGQ13253 232 aa20.14■□□□□ 0.81
ALKBH3-203ENST00000527029 CRAMP1Q96RY5 1269 aa20.14■□□□□ 0.81
ALKBH3-203ENST00000527029 NUP98P52948 1817 aa20.13■□□□□ 0.81
ALKBH3-203ENST00000527029 HIRAP54198 1017 aaPredicted RBP20.13■□□□□ 0.81
ALKBH3-203ENST00000527029 CCDC184Q52MB2 194 aa20.13■□□□□ 0.81
ALKBH3-203ENST00000527029 RBM17Q96I25 401 aaKnown RBP20.13■□□□□ 0.81
ALKBH3-203ENST00000527029 ZNRF3Q9ULT6 936 aa20.12■□□□□ 0.81
ALKBH3-203ENST00000527029 PPP2R1AP30153 589 aa20.11■□□□□ 0.81
ALKBH3-203ENST00000527029 PRKAR2BP31323 418 aa20.11■□□□□ 0.81
ALKBH3-203ENST00000527029 C3orf67Q6ZVT6 689 aa20.11■□□□□ 0.81
ALKBH3-203ENST00000527029 CDC37L1Q7L3B6 337 aa20.11■□□□□ 0.81
ALKBH3-203ENST00000527029 MCM10Q7L590 875 aa20.11■□□□□ 0.81
ALKBH3-203ENST00000527029 NGEFQ8N5V2 710 aa20.11■□□□□ 0.81
ALKBH3-203ENST00000527029 ZC3H15Q8WU90 426 aaKnown RBP20.11■□□□□ 0.81
ALKBH3-203ENST00000527029 VPS33BQ9H267 617 aa20.11■□□□□ 0.81
ALKBH3-203ENST00000527029 GTF3C3Q9Y5Q9 886 aa20.11■□□□□ 0.81
ALKBH3-203ENST00000527029 ERVV-1B6SEH8 477 aa20.1■□□□□ 0.81
ALKBH3-203ENST00000527029 GPTP24298 496 aa20.1■□□□□ 0.81
ALKBH3-203ENST00000527029 HUNKP57058 714 aa20.1■□□□□ 0.81
ALKBH3-203ENST00000527029 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
ALKBH3-203ENST00000527029 PRPF38BQ5VTL8 546 aaKnown RBP20.1■□□□□ 0.81
ALKBH3-203ENST00000527029 TRPM4Q8TD43 1214 aa20.1■□□□□ 0.81
ALKBH3-203ENST00000527029 UBN2Q6ZU65 1347 aa20.09■□□□□ 0.81
ALKBH3-203ENST00000527029 SUSD4Q5VX71 490 aa20.09■□□□□ 0.81
ALKBH3-203ENST00000527029 RSPH6AQ9H0K4 717 aa20.09■□□□□ 0.81
ALKBH3-203ENST00000527029 IBTKQ9P2D0 1353 aaPredicted RBP20.08■□□□□ 0.81
ALKBH3-203ENST00000527029 MAP3K15Q6ZN16 1313 aa20.08■□□□□ 0.81
ALKBH3-203ENST00000527029 DLK2Q6UY11 383 aa20.08■□□□□ 0.81
ALKBH3-203ENST00000527029 USP48Q86UV5 1035 aa20.08■□□□□ 0.81
ALKBH3-203ENST00000527029 RTF1Q92541 710 aaKnown RBP20.08■□□□□ 0.81
ALKBH3-203ENST00000527029 BCL2L13Q9BXK5 485 aa20.08■□□□□ 0.81
ALKBH3-203ENST00000527029 ATP6V0A2Q9Y487 856 aa20.08■□□□□ 0.81
ALKBH3-203ENST00000527029 CDHR2Q9BYE9 1310 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms