RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 NPHP1O15259 732 aa16.15■□□□□ 0.18
SSSCA1-203ENST00000526877 IPO8O15397 1037 aaKnown RBP16.15■□□□□ 0.18
SSSCA1-203ENST00000526877 PLIN1O60240 522 aa16.15■□□□□ 0.18
SSSCA1-203ENST00000526877 FER1L6Q2WGJ9 1857 aa16.15■□□□□ 0.18
SSSCA1-203ENST00000526877 ZNF34Q8IZ26 560 aa16.15■□□□□ 0.18
SSSCA1-203ENST00000526877 MRPL50Q8N5N7 158 aaKnown RBP16.15■□□□□ 0.18
SSSCA1-203ENST00000526877 MASTLQ96GX5 879 aa16.15■□□□□ 0.18
SSSCA1-203ENST00000526877 STK31Q9BXU1 1019 aa16.15■□□□□ 0.18
SSSCA1-203ENST00000526877 ZBTB3Q9H5J0 574 aa16.15■□□□□ 0.18
SSSCA1-203ENST00000526877 ARFGEF2Q9Y6D5 1785 aa16.14■□□□□ 0.17
SSSCA1-203ENST00000526877 FAM177BA6PVY3 158 aa16.14■□□□□ 0.17
SSSCA1-203ENST00000526877 C21orf2O43822 256 aa16.14■□□□□ 0.17
SSSCA1-203ENST00000526877 ANXA1P04083 346 aa16.14■□□□□ 0.17
SSSCA1-203ENST00000526877 MS4A1P11836 297 aa16.14■□□□□ 0.17
SSSCA1-203ENST00000526877 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
SSSCA1-203ENST00000526877 KIF6Q6ZMV9 814 aa16.14■□□□□ 0.17
SSSCA1-203ENST00000526877 C7orf43Q8WVR3 580 aa16.14■□□□□ 0.17
SSSCA1-203ENST00000526877 CNKSR1Q969H4 720 aa16.14■□□□□ 0.17
SSSCA1-203ENST00000526877 CACNA1SQ13698 1873 aa16.14■□□□□ 0.17
SSSCA1-203ENST00000526877 TCERG1O14776 1098 aaKnown RBP16.13■□□□□ 0.17
SSSCA1-203ENST00000526877 LMNB1P20700 586 aa16.13■□□□□ 0.17
SSSCA1-203ENST00000526877 IRX6P78412 446 aaPredicted RBP16.13■□□□□ 0.17
SSSCA1-203ENST00000526877 HDGFL1Q5TGJ6 251 aa16.13■□□□□ 0.17
SSSCA1-203ENST00000526877 ZKSCAN2Q63HK3 967 aa16.13■□□□□ 0.17
SSSCA1-203ENST00000526877 NMRK2Q9NPI5 230 aa16.13■□□□□ 0.17
SSSCA1-203ENST00000526877 UBN2Q6ZU65 1347 aa16.13■□□□□ 0.17
SSSCA1-203ENST00000526877 SUSD4Q5VX71 490 aa16.12■□□□□ 0.17
SSSCA1-203ENST00000526877 ERICH6BQ5W0A0 696 aa16.12■□□□□ 0.17
SSSCA1-203ENST00000526877 PRPF40BQ6NWY9 871 aaKnown RBP16.12■□□□□ 0.17
SSSCA1-203ENST00000526877 NECTIN2Q92692 538 aa16.12■□□□□ 0.17
SSSCA1-203ENST00000526877 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
SSSCA1-203ENST00000526877 NOB1Q9ULX3 412 aaKnown RBP16.12■□□□□ 0.17
SSSCA1-203ENST00000526877 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
SSSCA1-203ENST00000526877 NPR1P16066 1061 aa16.11■□□□□ 0.17
SSSCA1-203ENST00000526877 GPTP24298 496 aa16.11■□□□□ 0.17
SSSCA1-203ENST00000526877 PDE3AQ14432 1141 aa16.11■□□□□ 0.17
SSSCA1-203ENST00000526877 COPS6Q7L5N1 327 aa16.11■□□□□ 0.17
SSSCA1-203ENST00000526877 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
SSSCA1-203ENST00000526877 DDX21Q9NR30 783 aaKnown RBP eCLIP16.11■□□□□ 0.17
SSSCA1-203ENST00000526877 ABCC12Q96J65 1359 aa16.11■□□□□ 0.17
SSSCA1-203ENST00000526877 DICER1Q9UPY3 1922 aaKnown RBP16.1■□□□□ 0.17
SSSCA1-203ENST00000526877 CRY2Q49AN0 593 aa16.1■□□□□ 0.17
SSSCA1-203ENST00000526877 ERFEQ4G0M1 354 aa16.1■□□□□ 0.17
SSSCA1-203ENST00000526877 ARHGAP45Q92619 1136 aa16.1■□□□□ 0.17
SSSCA1-203ENST00000526877 NYXQ9GZU5 481 aa16.1■□□□□ 0.17
SSSCA1-203ENST00000526877 TNRC6CQ9HCJ0 1690 aaKnown RBP16.1■□□□□ 0.17
SSSCA1-203ENST00000526877 LTBP3Q9NS15 1303 aa16.1■□□□□ 0.17
SSSCA1-203ENST00000526877 ZC3H4Q9UPT8 1303 aaKnown RBP16.1■□□□□ 0.17
SSSCA1-203ENST00000526877 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
SSSCA1-203ENST00000526877 NTSR2O95665 410 aa16.09■□□□□ 0.17
SSSCA1-203ENST00000526877 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
SSSCA1-203ENST00000526877 ATF7IPQ6VMQ6 1270 aa16.09■□□□□ 0.17
SSSCA1-203ENST00000526877 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
SSSCA1-203ENST00000526877 FTSJ3Q8IY81 847 aaKnown RBP16.08■□□□□ 0.16
SSSCA1-203ENST00000526877 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
SSSCA1-203ENST00000526877 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.16
SSSCA1-203ENST00000526877 DBF4Q9UBU7 674 aaPredicted RBP16.08■□□□□ 0.16
SSSCA1-203ENST00000526877 PTPRCP08575 1304 aa16.08■□□□□ 0.16
SSSCA1-203ENST00000526877 KDM2BQ8NHM5 1336 aa16.08■□□□□ 0.16
SSSCA1-203ENST00000526877 RIC1Q4ADV7 1423 aa16.08■□□□□ 0.16
SSSCA1-203ENST00000526877 GLTPD2A6NH11 291 aa16.07■□□□□ 0.16
SSSCA1-203ENST00000526877 TOMM70O94826 608 aa16.07■□□□□ 0.16
SSSCA1-203ENST00000526877 AIMP1Q12904 312 aaKnown RBP16.07■□□□□ 0.16
SSSCA1-203ENST00000526877 PARP10Q53GL7 1025 aa16.07■□□□□ 0.16
SSSCA1-203ENST00000526877 DZIP1LQ8IYY4 767 aaKnown RBP16.07■□□□□ 0.16
SSSCA1-203ENST00000526877 RRAGCQ9HB90 399 aa16.07■□□□□ 0.16
SSSCA1-203ENST00000526877 ANKRD36CQ5JPF3 1778 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 TIAM2Q8IVF5 1701 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 TRIM27P14373 513 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 ALDH1B1P30837 517 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 HOXA10P31260 410 aaPredicted RBP16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 TCIRG1Q13488 830 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 SLC10A5Q5PT55 438 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 C20orf194Q5TEA3 1177 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 SOGA3Q5TF21 947 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 OLFM4Q6UX06 510 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 PPP1R42Q7Z4L9 355 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
SSSCA1-203ENST00000526877 HSPA6P17066 643 aa16.05■□□□□ 0.16
SSSCA1-203ENST00000526877 C3orf67Q6ZVT6 689 aa16.05■□□□□ 0.16
SSSCA1-203ENST00000526877 CLUAP1Q96AJ1 413 aa16.05■□□□□ 0.16
SSSCA1-203ENST00000526877 CRBNQ96SW2 442 aa16.05■□□□□ 0.16
SSSCA1-203ENST00000526877 HYPKQ9NX55 129 aa16.05■□□□□ 0.16
SSSCA1-203ENST00000526877 SNED1Q8TER0 1413 aa16.04■□□□□ 0.16
SSSCA1-203ENST00000526877 FLIIQ13045 1269 aa16.04■□□□□ 0.16
SSSCA1-203ENST00000526877 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
SSSCA1-203ENST00000526877 NLRP10Q86W26 655 aa16.04■□□□□ 0.16
SSSCA1-203ENST00000526877 PLBD2Q8NHP8 589 aa16.04■□□□□ 0.16
SSSCA1-203ENST00000526877 PANK1Q8TE04 598 aa16.04■□□□□ 0.16
SSSCA1-203ENST00000526877 UTP14AQ9BVJ6 771 aaKnown RBP16.04■□□□□ 0.16
SSSCA1-203ENST00000526877 POTECB2RU33 542 aa16.03■□□□□ 0.16
SSSCA1-203ENST00000526877 HSP90AB3PQ58FF7 597 aa16.03■□□□□ 0.16
SSSCA1-203ENST00000526877 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
SSSCA1-203ENST00000526877 G2E3Q7L622 706 aa16.03■□□□□ 0.16
SSSCA1-203ENST00000526877 SYNE4Q8N205 404 aa16.03■□□□□ 0.16
SSSCA1-203ENST00000526877 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
SSSCA1-203ENST00000526877 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
SSSCA1-203ENST00000526877 CRAMP1Q96RY5 1269 aa16.03■□□□□ 0.16
SSSCA1-203ENST00000526877 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.16
SSSCA1-203ENST00000526877 FKBP5Q13451 457 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms