RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 ZNF622Q969S3 477 aaKnown RBP eCLIP13.98□□□□□ -0.17
VPS11-202ENST00000526829 BRIP1Q9BX63 1249 aa13.98□□□□□ -0.17
VPS11-202ENST00000526829 RRAGCQ9HB90 399 aa13.98□□□□□ -0.17
VPS11-202ENST00000526829 TBC1D2BQ9UPU7 963 aa13.98□□□□□ -0.17
VPS11-202ENST00000526829 BTBD11A6QL63 1104 aa13.98□□□□□ -0.17
VPS11-202ENST00000526829 NFKBIEO00221 500 aa13.98□□□□□ -0.17
VPS11-202ENST00000526829 CAMTA2O94983 1202 aa13.98□□□□□ -0.17
VPS11-202ENST00000526829 A1BGP04217 495 aa13.98□□□□□ -0.17
VPS11-202ENST00000526829 U2AF1L5P0DN76 240 aaPredicted RBP13.98□□□□□ -0.17
VPS11-202ENST00000526829 U2AF1Q01081 240 aaKnown RBP eCLIP13.98□□□□□ -0.17
VPS11-202ENST00000526829 PRR5LQ6MZQ0 368 aa13.98□□□□□ -0.17
VPS11-202ENST00000526829 FAM43BQ6ZT52 329 aaPredicted RBP13.98□□□□□ -0.17
VPS11-202ENST00000526829 PNISRQ8TF01 805 aaKnown RBP13.98□□□□□ -0.17
VPS11-202ENST00000526829 ZNF330Q9Y3S2 320 aaPredicted RBP13.98□□□□□ -0.17
VPS11-202ENST00000526829 FER1L6Q2WGJ9 1857 aa13.97□□□□□ -0.17
VPS11-202ENST00000526829 PPP2R1AP30153 589 aa13.97□□□□□ -0.17
VPS11-202ENST00000526829 PDE6BP35913 854 aa13.97□□□□□ -0.17
VPS11-202ENST00000526829 NPHP1O15259 732 aa13.96□□□□□ -0.17
VPS11-202ENST00000526829 DICER1Q9UPY3 1922 aaKnown RBP13.96□□□□□ -0.17
VPS11-202ENST00000526829 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.18
VPS11-202ENST00000526829 GLTPD2A6NH11 291 aa13.96□□□□□ -0.18
VPS11-202ENST00000526829 ANP32BQ92688 251 aaKnown RBP13.96□□□□□ -0.18
VPS11-202ENST00000526829 TMEM51Q9NW97 253 aa13.96□□□□□ -0.18
VPS11-202ENST00000526829 EXOC6Q8TAG9 804 aa13.95□□□□□ -0.18
VPS11-202ENST00000526829 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
VPS11-202ENST00000526829 NFKBIBQ15653 356 aa13.94□□□□□ -0.18
VPS11-202ENST00000526829 SETDB2Q96T68 719 aa13.94□□□□□ -0.18
VPS11-202ENST00000526829 HTATSF1O43719 755 aaKnown RBP13.94□□□□□ -0.18
VPS11-202ENST00000526829 DZIP3Q86Y13 1208 aaKnown RBP13.94□□□□□ -0.18
VPS11-202ENST00000526829 CCDC24Q8N4L8 307 aa13.94□□□□□ -0.18
VPS11-202ENST00000526829 CNBD1Q8NA66 436 aa13.94□□□□□ -0.18
VPS11-202ENST00000526829 SMC1BQ8NDV3 1235 aa13.94□□□□□ -0.18
VPS11-202ENST00000526829 PDCL3Q9H2J4 239 aa13.94□□□□□ -0.18
VPS11-202ENST00000526829 SLX4Q8IY92 1834 aa13.93□□□□□ -0.18
VPS11-202ENST00000526829 PRAMEF22A3QJZ6 481 aa13.93□□□□□ -0.18
VPS11-202ENST00000526829 SNRPA1P09661 255 aaKnown RBP13.93□□□□□ -0.18
VPS11-202ENST00000526829 AXDND1Q5T1B0 1012 aaPredicted RBP13.93□□□□□ -0.18
VPS11-202ENST00000526829 MCM10Q7L590 875 aa13.93□□□□□ -0.18
VPS11-202ENST00000526829 PLCD3Q8N3E9 789 aa13.93□□□□□ -0.18
VPS11-202ENST00000526829 LTBP3Q9NS15 1303 aa13.93□□□□□ -0.18
VPS11-202ENST00000526829 RGL2O15211 777 aa13.92□□□□□ -0.18
VPS11-202ENST00000526829 VEGFAP15692 232 aaPredicted RBP13.92□□□□□ -0.18
VPS11-202ENST00000526829 STYK1Q6J9G0 422 aa13.92□□□□□ -0.18
VPS11-202ENST00000526829 CLEC4GQ6UXB4 293 aa13.92□□□□□ -0.18
VPS11-202ENST00000526829 KLRG1Q96E93 195 aa13.92□□□□□ -0.18
VPS11-202ENST00000526829 CACNA1SQ13698 1873 aa13.92□□□□□ -0.18
VPS11-202ENST00000526829 C21orf2O43822 256 aa13.92□□□□□ -0.18
VPS11-202ENST00000526829 IRX3P78415 501 aaPredicted RBP13.92□□□□□ -0.18
VPS11-202ENST00000526829 JMYQ8N9B5 988 aa13.92□□□□□ -0.18
VPS11-202ENST00000526829 RCAN3Q9UKA8 241 aa13.92□□□□□ -0.18
VPS11-202ENST00000526829 SRGNP10124 158 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 PIP4K2AP48426 406 aaPredicted RBP13.91□□□□□ -0.18
VPS11-202ENST00000526829 ST5P78524 1137 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 HTRA3P83110 453 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 CC2D2BQ6DHV5 1058 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 CERS3Q8IU89 383 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 FRAT1Q92837 279 aaPredicted RBP13.91□□□□□ -0.18
VPS11-202ENST00000526829 CNKSR1Q969H4 720 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 LAMB4A4D0S4 1761 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 POTECB2RU33 542 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 NBPF26B4DH59 902 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 PATL2C9JE40 543 aaKnown RBP13.91□□□□□ -0.18
VPS11-202ENST00000526829 DCTN1Q14203 1278 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 NBPF10Q6P3W6 841 aaKnown RBP13.91□□□□□ -0.18
VPS11-202ENST00000526829 NBPF15Q8N660 670 aa13.91□□□□□ -0.18
VPS11-202ENST00000526829 DLG5Q8TDM6 1919 aa13.9□□□□□ -0.18
VPS11-202ENST00000526829 MASTLQ96GX5 879 aa13.9□□□□□ -0.18
VPS11-202ENST00000526829 PNNQ9H307 717 aaKnown RBP13.9□□□□□ -0.18
VPS11-202ENST00000526829 PRDM16Q9HAZ2 1276 aa13.9□□□□□ -0.18
VPS11-202ENST00000526829 ZNF652Q9Y2D9 606 aa13.9□□□□□ -0.18
VPS11-202ENST00000526829 KDM3BQ7LBC6 1761 aa13.9□□□□□ -0.18
VPS11-202ENST00000526829 KLRG2A4D1S0 409 aaPredicted RBP13.89□□□□□ -0.19
VPS11-202ENST00000526829 PRPF40BQ6NWY9 871 aaKnown RBP13.89□□□□□ -0.19
VPS11-202ENST00000526829 TAOK3Q9H2K8 898 aa13.89□□□□□ -0.19
VPS11-202ENST00000526829 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
VPS11-202ENST00000526829 TAF7Q15545 349 aaPredicted RBP13.89□□□□□ -0.19
VPS11-202ENST00000526829 SOGA3Q5TF21 947 aa13.89□□□□□ -0.19
VPS11-202ENST00000526829 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
VPS11-202ENST00000526829 ERFEQ4G0M1 354 aa13.88□□□□□ -0.19
VPS11-202ENST00000526829 NBPF5PQ86XG9 351 aaPredicted RBP13.88□□□□□ -0.19
VPS11-202ENST00000526829 C7orf43Q8WVR3 580 aa13.88□□□□□ -0.19
VPS11-202ENST00000526829 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
VPS11-202ENST00000526829 NPR1P16066 1061 aa13.86□□□□□ -0.19
VPS11-202ENST00000526829 TPTE2Q6XPS3 522 aa13.86□□□□□ -0.19
VPS11-202ENST00000526829 PLEKHF1Q96S99 279 aa13.86□□□□□ -0.19
VPS11-202ENST00000526829 NIP7Q9Y221 180 aaKnown RBP eCLIP13.86□□□□□ -0.19
VPS11-202ENST00000526829 SMAP1Q8IYB5 467 aaPredicted RBP13.85□□□□□ -0.19
VPS11-202ENST00000526829 DNAJC2Q99543 621 aaKnown RBP13.85□□□□□ -0.19
VPS11-202ENST00000526829 MIS18AQ9NYP9 233 aa13.85□□□□□ -0.19
VPS11-202ENST00000526829 HLFQ16534 295 aa13.85□□□□□ -0.19
VPS11-202ENST00000526829 MYBBP1AQ9BQG0 1328 aaKnown RBP13.85□□□□□ -0.19
VPS11-202ENST00000526829 NUP98P52948 1817 aa13.85□□□□□ -0.19
VPS11-202ENST00000526829 RALBP1Q15311 655 aa13.84□□□□□ -0.19
VPS11-202ENST00000526829 CCDC93Q567U6 631 aa13.84□□□□□ -0.19
VPS11-202ENST00000526829 MAPK8IP3Q9UPT6 1336 aa13.84□□□□□ -0.19
VPS11-202ENST00000526829 SCN4AP35499 1836 aa13.83□□□□□ -0.2
VPS11-202ENST00000526829 ERVV-1B6SEH8 477 aa13.83□□□□□ -0.2
VPS11-202ENST00000526829 DDNO94850 711 aaPredicted RBP13.83□□□□□ -0.2
VPS11-202ENST00000526829 EIF4A1P60842 406 aaKnown RBP13.83□□□□□ -0.2
VPS11-202ENST00000526829 NFE2L2Q16236 605 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms