RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 ATP6V1DQ9Y5K8 247 aa13.97□□□□□ -0.17
LINC01001-201ENST00000526704 NPHP4O75161 1426 aaPredicted RBP13.96□□□□□ -0.17
LINC01001-201ENST00000526704 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.17
LINC01001-201ENST00000526704 PDIA6Q15084 440 aa13.96□□□□□ -0.17
LINC01001-201ENST00000526704 ME3Q16798 604 aa13.96□□□□□ -0.17
LINC01001-201ENST00000526704 CREB3L3Q68CJ9 461 aa13.96□□□□□ -0.17
LINC01001-201ENST00000526704 ANKLE2Q86XL3 938 aa13.96□□□□□ -0.17
LINC01001-201ENST00000526704 DDX54Q8TDD1 881 aaKnown RBP13.96□□□□□ -0.17
LINC01001-201ENST00000526704 SNRKQ9NRH2 765 aa13.96□□□□□ -0.17
LINC01001-201ENST00000526704 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC01001-201ENST00000526704 ALS2Q96Q42 1657 aa13.96□□□□□ -0.17
LINC01001-201ENST00000526704 COL9A3Q14050 684 aaPredicted RBP13.96□□□□□ -0.17
LINC01001-201ENST00000526704 TPRNQ4KMQ1 711 aa13.96□□□□□ -0.17
LINC01001-201ENST00000526704 DDX21Q9NR30 783 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC01001-201ENST00000526704 KIF1AQ12756 1690 aa13.96□□□□□ -0.18
LINC01001-201ENST00000526704 LETM1O95202 739 aaPredicted RBP13.95□□□□□ -0.18
LINC01001-201ENST00000526704 PTMAP06454 111 aaKnown RBP13.95□□□□□ -0.18
LINC01001-201ENST00000526704 DNM1Q05193 864 aaKnown RBP13.95□□□□□ -0.18
LINC01001-201ENST00000526704 CSPP1Q1MSJ5 1256 aa13.95□□□□□ -0.18
LINC01001-201ENST00000526704 MAP4K1Q92918 833 aa13.95□□□□□ -0.18
LINC01001-201ENST00000526704 ORAI2Q96SN7 254 aa13.95□□□□□ -0.18
LINC01001-201ENST00000526704 CCDC8Q9H0W5 538 aaPredicted RBP13.95□□□□□ -0.18
LINC01001-201ENST00000526704 JCADQ9P266 1359 aa13.95□□□□□ -0.18
LINC01001-201ENST00000526704 MED23Q9ULK4 1368 aa13.95□□□□□ -0.18
LINC01001-201ENST00000526704 A0A0D9SFI3 127 aa13.95□□□□□ -0.18
LINC01001-201ENST00000526704 IGKV5-2P06315 115 aa13.95□□□□□ -0.18
LINC01001-201ENST00000526704 HCLS1P14317 486 aaPredicted RBP13.95□□□□□ -0.18
LINC01001-201ENST00000526704 FUCA2Q9BTY2 467 aa13.95□□□□□ -0.18
LINC01001-201ENST00000526704 USP25Q9UHP3 1055 aa13.95□□□□□ -0.18
LINC01001-201ENST00000526704 AXIN2Q9Y2T1 843 aa13.95□□□□□ -0.18
LINC01001-201ENST00000526704 MYH15Q9Y2K3 1946 aa13.94□□□□□ -0.18
LINC01001-201ENST00000526704 LAMA4Q16363 1823 aa13.94□□□□□ -0.18
LINC01001-201ENST00000526704 HIP1O00291 1037 aa13.94□□□□□ -0.18
LINC01001-201ENST00000526704 SLC27A2O14975 620 aa13.94□□□□□ -0.18
LINC01001-201ENST00000526704 DDX58O95786 925 aaKnown RBP13.94□□□□□ -0.18
LINC01001-201ENST00000526704 ZKSCAN1P17029 563 aaPredicted RBP13.94□□□□□ -0.18
LINC01001-201ENST00000526704 AIMP1Q12904 312 aaKnown RBP13.94□□□□□ -0.18
LINC01001-201ENST00000526704 G3BP1Q13283 466 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC01001-201ENST00000526704 NECAB1Q8N987 351 aa13.94□□□□□ -0.18
LINC01001-201ENST00000526704 TPCN1Q9ULQ1 816 aa13.94□□□□□ -0.18
LINC01001-201ENST00000526704 KDM6AO15550 1401 aaPredicted RBP13.94□□□□□ -0.18
LINC01001-201ENST00000526704 SIL1Q9H173 461 aa13.93□□□□□ -0.18
LINC01001-201ENST00000526704 VPS37CA5D8V6 355 aaPredicted RBP13.93□□□□□ -0.18
LINC01001-201ENST00000526704 LAMB4A4D0S4 1761 aa13.92□□□□□ -0.18
LINC01001-201ENST00000526704 KCNJ4P48050 445 aa13.92□□□□□ -0.18
LINC01001-201ENST00000526704 KIAA2012Q0VF49 1180 aa13.92□□□□□ -0.18
LINC01001-201ENST00000526704 KLHDC4Q8TBB5 520 aa13.92□□□□□ -0.18
LINC01001-201ENST00000526704 TAF6LQ9Y6J9 622 aa13.92□□□□□ -0.18
LINC01001-201ENST00000526704 ADCY5O95622 1261 aa13.92□□□□□ -0.18
LINC01001-201ENST00000526704 GIMAP6Q6P9H5 292 aa13.92□□□□□ -0.18
LINC01001-201ENST00000526704 FSD1Q9BTV5 496 aa13.92□□□□□ -0.18
LINC01001-201ENST00000526704 BOLA2Q9H3K6 86 aa13.92□□□□□ -0.18
LINC01001-201ENST00000526704 COL18A1P39060 1754 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 UQCRHLA0A096LP55 91 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 NEURL1BA8MQ27 555 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 UQCRHP07919 91 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 ERBB3P21860 1342 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 GLI3P10071 1580 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 PSMA5P28066 241 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 SLC39A6Q13433 755 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 EPHA10Q5JZY3 1008 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 LMOD2Q6P5Q4 547 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 CDC37L1Q7L3B6 337 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 ZNF589Q86UQ0 364 aaPredicted RBP13.91□□□□□ -0.18
LINC01001-201ENST00000526704 KLHL34Q8N239 644 aa13.91□□□□□ -0.18
LINC01001-201ENST00000526704 ZNF790Q6PG37 636 aa13.9□□□□□ -0.18
LINC01001-201ENST00000526704 LARP1Q6PKG0 1096 aaKnown RBP13.9□□□□□ -0.18
LINC01001-201ENST00000526704 MPNDQ8N594 471 aa13.9□□□□□ -0.18
LINC01001-201ENST00000526704 PKD1L3Q7Z443 1732 aa13.9□□□□□ -0.18
LINC01001-201ENST00000526704 RPS6KB1P23443 525 aa13.9□□□□□ -0.18
LINC01001-201ENST00000526704 TOB2Q14106 344 aaPredicted RBP13.9□□□□□ -0.18
LINC01001-201ENST00000526704 GCKRQ14397 625 aa13.9□□□□□ -0.18
LINC01001-201ENST00000526704 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
LINC01001-201ENST00000526704 TCEANC2Q96MN5 208 aa13.9□□□□□ -0.18
LINC01001-201ENST00000526704 MST1RQ04912 1400 aa13.9□□□□□ -0.18
LINC01001-201ENST00000526704 ADAMTSL3P82987 1691 aa13.9□□□□□ -0.18
LINC01001-201ENST00000526704 MYL6BP14649 208 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 LARP1BQ659C4 914 aaKnown RBP13.89□□□□□ -0.19
LINC01001-201ENST00000526704 BLOC1S2Q6QNY1 142 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 TTC6Q86TZ1 520 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 XAGE3Q8WTP9 111 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
LINC01001-201ENST00000526704 SLC52A2Q9HAB3 445 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 COL15A1P39059 1388 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 MEGF6O75095 1541 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 ABCC6O95255 1503 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 KDM4AO75164 1064 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 RNF20Q5VTR2 975 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 NPHP3Q7Z494 1330 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 ZNF830Q96NB3 372 aaPredicted RBP13.89□□□□□ -0.19
LINC01001-201ENST00000526704 MYD88Q99836 296 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
LINC01001-201ENST00000526704 NEXNQ0ZGT2 675 aa13.88□□□□□ -0.19
LINC01001-201ENST00000526704 EDC3Q96F86 508 aaKnown RBP13.88□□□□□ -0.19
LINC01001-201ENST00000526704 METTL22Q9BUU2 404 aaPredicted RBP13.88□□□□□ -0.19
LINC01001-201ENST00000526704 ELP1O95163 1332 aa13.88□□□□□ -0.19
LINC01001-201ENST00000526704 AP5Z1O43299 807 aa13.88□□□□□ -0.19
LINC01001-201ENST00000526704 RBM10P98175 930 aaKnown RBP13.88□□□□□ -0.19
LINC01001-201ENST00000526704 ANKRD1Q15327 319 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms