RNA–Protein interactions for RNA: ENST00000526664.5

PDE4DIP-223, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-223	ENST00000526664	DALRD3	Q5D0E6	543 aa	Known RBP	12.57	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	C7orf43	Q8WVR3	580 aa		12.57	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	CDCA7L	Q96GN5	454 aa		12.57	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	PDZRN3	Q9UPQ7	1066 aa		12.57	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	YY1	P25490	414 aa		12.56	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	HSP90AB3P	Q58FF7	597 aa		12.56	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	STYK1	Q6J9G0	422 aa		12.56	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	TTLL6	Q8N841	843 aa		12.56	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	NYX	Q9GZU5	481 aa		12.56	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	FER1L6	Q2WGJ9	1857 aa		12.56	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	DDX60	Q8IY21	1712 aa	Known RBP	12.56	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	CACNA1S	Q13698	1873 aa		12.55	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	MYH16	Q9H6N6	1097 aa		12.55	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	ATP5J2-PTCD1	G3V325	749 aa		12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	NFKBIE	O00221	500 aa		12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	SLC4A2	P04920	1241 aa		12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	IGKV5-2	P06315	115 aa		12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	HOXA10	P31260	410 aa	Predicted RBP	12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	SLC51A	Q86UW1	340 aa		12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	MASTL	Q96GX5	879 aa		12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	METTL22	Q9BUU2	404 aa	Predicted RBP	12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	UTP14A	Q9BVJ6	771 aa	Known RBP	12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	RNF123	Q5XPI4	1314 aa		12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	COL4A1	P02462	1669 aa		12.54	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	PI4KAP2	A4QPH2	592 aa		12.53	□□□□□ -0.4
PDE4DIP-223	ENST00000526664		E9PSI1	815 aa		12.53	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	NPR1	P16066	1061 aa		12.53	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	KSR2	Q6VAB6	950 aa		12.53	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	PPP1R42	Q7Z4L9	355 aa		12.53	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	PI4KAP1	Q8N8J0	262 aa		12.53	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.53	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	ZNF428	Q96B54	188 aa		12.53	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	CHMP4A	Q9BY43	222 aa		12.53	□□□□□ -0.4
PDE4DIP-223	ENST00000526664	FLII	Q13045	1269 aa		12.52	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	PRPF40B	Q6NWY9	871 aa	Known RBP	12.52	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	ARHGAP27	Q6ZUM4	889 aa		12.52	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	RIC3	Q7Z5B4	369 aa		12.52	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	CNKSR1	Q969H4	720 aa		12.52	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	MAP3K2	Q9Y2U5	619 aa		12.52	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	TAF1	P21675	1872 aa		12.51	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	CCDC88A	Q3V6T2	1871 aa		12.51	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	HCLS1	P14317	486 aa	Predicted RBP	12.51	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	RASSF7	Q02833	373 aa		12.51	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	OLFM4	Q6UX06	510 aa		12.51	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	FAM89A	Q96GI7	184 aa		12.51	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	MYD88	Q99836	296 aa		12.51	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	STK31	Q9BXU1	1019 aa		12.51	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	TRMT112	Q9UI30	125 aa	Known RBP	12.51	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	SH3TC1	Q8TE82	1336 aa		12.51	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	C21orf2	O43822	256 aa		12.5	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	GTF2E1	P29083	439 aa	Predicted RBP	12.5	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	CCDC191	Q8NCU4	936 aa		12.5	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	DICER1	Q9UPY3	1922 aa	Known RBP	12.49	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	LTBP3	Q9NS15	1303 aa		12.49	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	NEURL1B	A8MQ27	555 aa		12.49	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	NPHP1	O15259	732 aa		12.49	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	CASP7	P55210	303 aa		12.49	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	SF3B3	Q15393	1217 aa	Known RBP	12.49	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	MRPL50	Q8N5N7	158 aa	Known RBP	12.49	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.49	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	CRAMP1	Q96RY5	1269 aa		12.49	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	DDX58	O95786	925 aa	Known RBP	12.48	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	PCCA	P05165	728 aa	Predicted RBP	12.48	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	ALDH1B1	P30837	517 aa		12.48	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	CWF19L2	Q2TBE0	894 aa	Known RBP	12.48	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	C9orf131	Q5VYM1	1079 aa		12.48	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	SSH1	Q8WYL5	1049 aa		12.48	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	NLRP3	Q96P20	1036 aa		12.48	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	ABCC4	O15439	1325 aa		12.47	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	CDHR2	Q9BYE9	1310 aa		12.47	□□□□□ -0.41
PDE4DIP-223	ENST00000526664		F6X3S4	739 aa		12.47	□□□□□ -0.41
PDE4DIP-223	ENST00000526664		H7C1W4	665 aa		12.47	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	RTL5	Q5HYW3	569 aa	Predicted RBP	12.47	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	BEND3	Q5T5X7	828 aa		12.47	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	DNAAF4	Q8WXU2	420 aa		12.47	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	JARID2	Q92833	1246 aa	Predicted RBP	12.47	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	CWC25	Q9NXE8	425 aa	Predicted RBP	12.47	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.47	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	LRRC37A	A6NMS7	1700 aa		12.46	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	COL4A5	P29400	1685 aa		12.46	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	IRS4	O14654	1257 aa	Predicted RBP	12.46	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	FKBP5	Q13451	457 aa	Predicted RBP	12.46	□□□□□ -0.41
PDE4DIP-223	ENST00000526664	LMNB1	P20700	586 aa		12.45	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	BRPF1	P55201	1214 aa	Predicted RBP	12.45	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	GCKR	Q14397	625 aa		12.45	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	LINS1	Q8NG48	757 aa		12.45	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	RPGR	Q92834	1020 aa	Known RBP	12.45	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	RBM17	Q96I25	401 aa	Known RBP	12.45	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	LTBP1	Q14766	1721 aa		12.45	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	TIAM2	Q8IVF5	1701 aa		12.45	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	DUOX1	Q9NRD9	1551 aa		12.44	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	CT47B1	P0C2W7	299 aa	Predicted RBP	12.44	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	ALDH1L2	Q3SY69	923 aa		12.44	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	CCDC93	Q567U6	631 aa		12.44	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	SOGA3	Q5TF21	947 aa		12.44	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	CELF1	Q92879	486 aa	Known RBP	12.44	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	PLA2G12B	Q9BX93	195 aa		12.44	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	RNF181	Q9P0P0	153 aa		12.44	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	ATP6V0A2	Q9Y487	856 aa		12.44	□□□□□ -0.42

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