RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ANKRD36CQ5JPF3 1778 aa20.82■□□□□ 0.92
SSSCA1-202ENST00000526433 ARHGAP27Q6ZUM4 889 aa20.81■□□□□ 0.92
SSSCA1-202ENST00000526433 TRIM28Q13263 835 aaKnown RBP20.8■□□□□ 0.92
SSSCA1-202ENST00000526433 SLC10A5Q5PT55 438 aa20.8■□□□□ 0.92
SSSCA1-202ENST00000526433 STYK1Q6J9G0 422 aa20.8■□□□□ 0.92
SSSCA1-202ENST00000526433 KSR2Q6VAB6 950 aa20.8■□□□□ 0.92
SSSCA1-202ENST00000526433 ZNF428Q96B54 188 aa20.8■□□□□ 0.92
SSSCA1-202ENST00000526433 MASTLQ96GX5 879 aa20.8■□□□□ 0.92
SSSCA1-202ENST00000526433 TRMT112Q9UI30 125 aaKnown RBP20.8■□□□□ 0.92
SSSCA1-202ENST00000526433 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
SSSCA1-202ENST00000526433 ARFGEF1Q9Y6D6 1849 aa20.79■□□□□ 0.92
SSSCA1-202ENST00000526433 TRMT2AQ8IZ69 625 aaKnown RBP20.79■□□□□ 0.92
SSSCA1-202ENST00000526433 CNKSR1Q969H4 720 aa20.79■□□□□ 0.92
SSSCA1-202ENST00000526433 MYD88Q99836 296 aa20.79■□□□□ 0.92
SSSCA1-202ENST00000526433 MAP3K2Q9Y2U5 619 aa20.79■□□□□ 0.92
SSSCA1-202ENST00000526433 ABCC12Q96J65 1359 aa20.79■□□□□ 0.92
SSSCA1-202ENST00000526433 ARFGEF2Q9Y6D5 1785 aa20.78■□□□□ 0.92
SSSCA1-202ENST00000526433 PI4KAP2A4QPH2 592 aa20.78■□□□□ 0.92
SSSCA1-202ENST00000526433 NPR1P16066 1061 aa20.78■□□□□ 0.92
SSSCA1-202ENST00000526433 SYNE4Q8N205 404 aa20.78■□□□□ 0.92
SSSCA1-202ENST00000526433 PI4KAP1Q8N8J0 262 aa20.78■□□□□ 0.92
SSSCA1-202ENST00000526433 METTL22Q9BUU2 404 aaPredicted RBP20.78■□□□□ 0.92
SSSCA1-202ENST00000526433 FLIIQ13045 1269 aa20.77■□□□□ 0.92
SSSCA1-202ENST00000526433 COL11A2P13942 1736 aaPredicted RBP20.77■□□□□ 0.92
SSSCA1-202ENST00000526433 RNF123Q5XPI4 1314 aa20.77■□□□□ 0.91
SSSCA1-202ENST00000526433 HNRNPUQ00839 825 aaKnown RBP eCLIP20.76■□□□□ 0.91
SSSCA1-202ENST00000526433 NLRP3Q96P20 1036 aa20.76■□□□□ 0.91
SSSCA1-202ENST00000526433 SH3TC1Q8TE82 1336 aa20.76■□□□□ 0.91
SSSCA1-202ENST00000526433 HCLS1P14317 486 aaPredicted RBP20.75■□□□□ 0.91
SSSCA1-202ENST00000526433 CRY2Q49AN0 593 aa20.75■□□□□ 0.91
SSSCA1-202ENST00000526433 ZNF219Q9P2Y4 722 aaPredicted RBP20.75■□□□□ 0.91
SSSCA1-202ENST00000526433 ADCY9O60503 1353 aa20.74■□□□□ 0.91
SSSCA1-202ENST00000526433 FKBP5Q13451 457 aaPredicted RBP20.74■□□□□ 0.91
SSSCA1-202ENST00000526433 RIC1Q4ADV7 1423 aa20.74■□□□□ 0.91
SSSCA1-202ENST00000526433 C3orf67Q6ZVT6 689 aa20.74■□□□□ 0.91
SSSCA1-202ENST00000526433 CCDC191Q8NCU4 936 aa20.74■□□□□ 0.91
SSSCA1-202ENST00000526433 FAM89AQ96GI7 184 aa20.74■□□□□ 0.91
SSSCA1-202ENST00000526433 SLX4Q8IY92 1834 aa20.74■□□□□ 0.91
SSSCA1-202ENST00000526433 C21orf2O43822 256 aa20.73■□□□□ 0.91
SSSCA1-202ENST00000526433 ALDH1B1P30837 517 aa20.73■□□□□ 0.91
SSSCA1-202ENST00000526433 PRPF40BQ6NWY9 871 aaKnown RBP20.73■□□□□ 0.91
SSSCA1-202ENST00000526433 RPGRQ92834 1020 aaKnown RBP20.73■□□□□ 0.91
SSSCA1-202ENST00000526433 TNRC6CQ9HCJ0 1690 aaKnown RBP20.73■□□□□ 0.91
SSSCA1-202ENST00000526433 HOXA10P31260 410 aaPredicted RBP20.72■□□□□ 0.91
SSSCA1-202ENST00000526433 NEXNQ0ZGT2 675 aa20.72■□□□□ 0.91
SSSCA1-202ENST00000526433 RTL5Q5HYW3 569 aaPredicted RBP20.72■□□□□ 0.91
SSSCA1-202ENST00000526433 CWC25Q9NXE8 425 aaPredicted RBP20.72■□□□□ 0.91
SSSCA1-202ENST00000526433 CACNA1SQ13698 1873 aa20.71■□□□□ 0.91
SSSCA1-202ENST00000526433 IGKV5-2P06315 115 aa20.71■□□□□ 0.91
SSSCA1-202ENST00000526433 DNAAF4Q8WXU2 420 aa20.71■□□□□ 0.91
SSSCA1-202ENST00000526433 RBM17Q96I25 401 aaKnown RBP20.71■□□□□ 0.91
SSSCA1-202ENST00000526433 MRPL50Q8N5N7 158 aaKnown RBP20.7■□□□□ 0.9
SSSCA1-202ENST00000526433 ZBTB38Q8NAP3 1195 aaPredicted RBP20.7■□□□□ 0.9
SSSCA1-202ENST00000526433 C7orf43Q8WVR3 580 aa20.7■□□□□ 0.9
SSSCA1-202ENST00000526433 JARID2Q92833 1246 aaPredicted RBP20.7■□□□□ 0.9
SSSCA1-202ENST00000526433 IRS4O14654 1257 aaPredicted RBP20.69■□□□□ 0.9
SSSCA1-202ENST00000526433 PCCAP05165 728 aaPredicted RBP20.69■□□□□ 0.9
SSSCA1-202ENST00000526433 SSH1Q8WYL5 1049 aa20.69■□□□□ 0.9
SSSCA1-202ENST00000526433 CRAMP1Q96RY5 1269 aa20.69■□□□□ 0.9
SSSCA1-202ENST00000526433 NEURL1BA8MQ27 555 aa20.68■□□□□ 0.9
SSSCA1-202ENST00000526433 F6X3S4 739 aa20.68■□□□□ 0.9
SSSCA1-202ENST00000526433 CWF19L2Q2TBE0 894 aaKnown RBP20.68■□□□□ 0.9
SSSCA1-202ENST00000526433 CT47B1P0C2W7 299 aaPredicted RBP20.67■□□□□ 0.9
SSSCA1-202ENST00000526433 SOGA3Q5TF21 947 aa20.67■□□□□ 0.9
SSSCA1-202ENST00000526433 LAMB2P55268 1798 aa20.67■□□□□ 0.9
SSSCA1-202ENST00000526433 NFKBIEO00221 500 aa20.66■□□□□ 0.9
SSSCA1-202ENST00000526433 RASSF7Q02833 373 aa20.66■□□□□ 0.9
SSSCA1-202ENST00000526433 SF3B3Q15393 1217 aaKnown RBP20.66■□□□□ 0.9
SSSCA1-202ENST00000526433 ALDH1L2Q3SY69 923 aa20.66■□□□□ 0.9
SSSCA1-202ENST00000526433 C9orf131Q5VYM1 1079 aa20.66■□□□□ 0.9
SSSCA1-202ENST00000526433 LINS1Q8NG48 757 aa20.66■□□□□ 0.9
SSSCA1-202ENST00000526433 SBF1O95248 1867 aa20.66■□□□□ 0.9
SSSCA1-202ENST00000526433 DDX60Q8IY21 1712 aaKnown RBP20.65■□□□□ 0.9
SSSCA1-202ENST00000526433 HSP90B1P14625 803 aaKnown RBP20.65■□□□□ 0.9
SSSCA1-202ENST00000526433 OLFM4Q6UX06 510 aa20.65■□□□□ 0.9
SSSCA1-202ENST00000526433 DDX46Q7L014 1031 aaKnown RBP20.65■□□□□ 0.9
SSSCA1-202ENST00000526433 ZNF784Q8NCA9 323 aaPredicted RBP20.65■□□□□ 0.9
SSSCA1-202ENST00000526433 H7C1W4 665 aa20.64■□□□□ 0.89
SSSCA1-202ENST00000526433 GCKRQ14397 625 aa20.64■□□□□ 0.89
SSSCA1-202ENST00000526433 CCDC93Q567U6 631 aa20.64■□□□□ 0.89
SSSCA1-202ENST00000526433 BCL2L13Q9BXK5 485 aa20.64■□□□□ 0.89
SSSCA1-202ENST00000526433 RNF181Q9P0P0 153 aa20.64■□□□□ 0.89
SSSCA1-202ENST00000526433 CCDC88AQ3V6T2 1871 aa20.64■□□□□ 0.89
SSSCA1-202ENST00000526433 FER1L6Q2WGJ9 1857 aa20.63■□□□□ 0.89
SSSCA1-202ENST00000526433 ABCC4O15439 1325 aa20.63■□□□□ 0.89
SSSCA1-202ENST00000526433 PDE8AO60658 829 aa20.63■□□□□ 0.89
SSSCA1-202ENST00000526433 BBOX1O75936 387 aa20.63■□□□□ 0.89
SSSCA1-202ENST00000526433 PRELPP51888 382 aa20.63■□□□□ 0.89
SSSCA1-202ENST00000526433 BEND3Q5T5X7 828 aa20.63■□□□□ 0.89
SSSCA1-202ENST00000526433 CDHR2Q9BYE9 1310 aa20.62■□□□□ 0.89
SSSCA1-202ENST00000526433 PPEF1O14829 653 aaPredicted RBP20.62■□□□□ 0.89
SSSCA1-202ENST00000526433 LMNB1P20700 586 aa20.62■□□□□ 0.89
SSSCA1-202ENST00000526433 CC2D2BQ6DHV5 1058 aa20.62■□□□□ 0.89
SSSCA1-202ENST00000526433 SLC4A10Q6U841 1118 aa20.62■□□□□ 0.89
SSSCA1-202ENST00000526433 RTKN2Q8IZC4 609 aa20.62■□□□□ 0.89
SSSCA1-202ENST00000526433 SMC4Q9NTJ3 1288 aa20.62■□□□□ 0.89
SSSCA1-202ENST00000526433 TAF1P21675 1872 aa20.62■□□□□ 0.89
SSSCA1-202ENST00000526433 ZBED9Q6R2W3 1325 aa20.61■□□□□ 0.89
SSSCA1-202ENST00000526433 TAOK3Q9H2K8 898 aa20.61■□□□□ 0.89
SSSCA1-202ENST00000526433 PTPRCP08575 1304 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms