RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 RNF20Q5VTR2 975 aa16.29■□□□□ 0.2
PCDHB18P-202ENST00000526308 TM6SF1Q9BZW5 370 aa16.29■□□□□ 0.2
PCDHB18P-202ENST00000526308 SIL1Q9H173 461 aa16.29■□□□□ 0.2
PCDHB18P-202ENST00000526308 DNAJC25Q9H1X3 360 aa16.29■□□□□ 0.2
PCDHB18P-202ENST00000526308 HOXC9P31274 260 aa16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 UTP14CQ5TAP6 766 aaKnown RBP16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 LARP1Q6PKG0 1096 aaKnown RBP16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 BOLA2Q9H3K6 86 aa16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 CLIP2Q9UDT6 1046 aa16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 FOSBP53539 338 aa16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 FGD1P98174 961 aa16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 GOLGA6L19H0YKK7 550 aa16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 H3BQV1 296 aa16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 IFFO2Q5TF58 517 aa16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 ABTB2Q8N961 1025 aa16.28■□□□□ 0.2
PCDHB18P-202ENST00000526308 AKAP12Q02952 1782 aa16.27■□□□□ 0.2
PCDHB18P-202ENST00000526308 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.2
PCDHB18P-202ENST00000526308 NECTIN1Q15223 517 aa16.27■□□□□ 0.2
PCDHB18P-202ENST00000526308 CCDC112Q8NEF3 446 aa16.27■□□□□ 0.2
PCDHB18P-202ENST00000526308 A0A0U1RQG5 324 aaPredicted RBP16.27■□□□□ 0.19
PCDHB18P-202ENST00000526308 KCNQ3O43525 872 aa16.27■□□□□ 0.19
PCDHB18P-202ENST00000526308 GTPBP4Q9BZE4 634 aaKnown RBP16.27■□□□□ 0.19
PCDHB18P-202ENST00000526308 LGR6Q9HBX8 967 aa16.27■□□□□ 0.19
PCDHB18P-202ENST00000526308 DDX19AQ9NUU7 478 aaKnown RBP16.27■□□□□ 0.19
PCDHB18P-202ENST00000526308 SLC27A2O14975 620 aa16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 ERC1Q8IUD2 1116 aa16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 MAP3K2Q9Y2U5 619 aa16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 NPHP3Q7Z494 1330 aa16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 NR1I2O75469 434 aa16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 ZNF75DP51815 510 aa16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 COL9A3Q14050 684 aaPredicted RBP16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 ANKRD1Q15327 319 aa16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 CWF19L2Q2TBE0 894 aaKnown RBP16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 SETD1AO15047 1707 aaKnown RBP16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 ZSCAN25Q6NSZ9 544 aa16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 LEO1Q8WVC0 666 aaPredicted RBP16.26■□□□□ 0.19
PCDHB18P-202ENST00000526308 TECPR2O15040 1411 aa16.25■□□□□ 0.19
PCDHB18P-202ENST00000526308 ZNF771Q7L3S4 317 aaPredicted RBP16.25■□□□□ 0.19
PCDHB18P-202ENST00000526308 FBXW7Q969H0 707 aa16.25■□□□□ 0.19
PCDHB18P-202ENST00000526308 BTBD11A6QL63 1104 aa16.25■□□□□ 0.19
PCDHB18P-202ENST00000526308 EIF4A1P60842 406 aaKnown RBP16.25■□□□□ 0.19
PCDHB18P-202ENST00000526308 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
PCDHB18P-202ENST00000526308 AMOTL2Q9Y2J4 779 aa16.25■□□□□ 0.19
PCDHB18P-202ENST00000526308 HIP1O00291 1037 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 NRXN3Q9Y4C0 1643 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 SPATA31D1Q6ZQQ2 1576 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 NAA30Q147X3 362 aaPredicted RBP16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 NAP1L2Q9ULW6 460 aaPredicted RBP16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 PXDNLA1KZ92 1463 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 ELP1O95163 1332 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 A0A0D9SFI3 127 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 SMTNL1A8MU46 457 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 BECN2A8MW95 431 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 NCBP1Q09161 790 aaKnown RBP16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 ANKRD7Q92527 254 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 CLSTN2Q9H4D0 955 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 TUBGCP6Q96RT7 1819 aa16.24■□□□□ 0.19
PCDHB18P-202ENST00000526308 XRN1Q8IZH2 1706 aaKnown RBP16.23■□□□□ 0.19
PCDHB18P-202ENST00000526308 MPRIPQ6WCQ1 1025 aa16.23■□□□□ 0.19
PCDHB18P-202ENST00000526308 MAP4K1Q92918 833 aa16.23■□□□□ 0.19
PCDHB18P-202ENST00000526308 JAK2O60674 1132 aa16.23■□□□□ 0.19
PCDHB18P-202ENST00000526308 LTKP29376 864 aa16.23■□□□□ 0.19
PCDHB18P-202ENST00000526308 FILIP1Q7Z7B0 1213 aa16.23■□□□□ 0.19
PCDHB18P-202ENST00000526308 TAF6LQ9Y6J9 622 aa16.23■□□□□ 0.19
PCDHB18P-202ENST00000526308 TMEM2Q9UHN6 1383 aa16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 CTIFO43310 598 aaKnown RBP16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 PDIA4P13667 645 aaKnown RBP16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 RPS6KB1P23443 525 aa16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 CACTINQ8WUQ7 758 aaKnown RBP16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 EAF2Q96CJ1 260 aaPredicted RBP16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 TLR7Q9NYK1 1049 aaKnown RBP16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 DBF4Q9UBU7 674 aaPredicted RBP16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 HDAC5Q9UQL6 1122 aa16.22■□□□□ 0.19
PCDHB18P-202ENST00000526308 TNRQ92752 1358 aa16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 CEP135Q66GS9 1140 aa16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 BRF1Q92994 677 aa16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 CCDC9Q9Y3X0 531 aaKnown RBP16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 EID1Q9Y6B2 187 aa16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 V9GYY5 206 aaPredicted RBP16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 ZNF530Q6P9A1 599 aaPredicted RBP16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 TRMT1Q9NXH9 659 aaKnown RBP16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 PAXBP1Q9Y5B6 917 aa16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.19
PCDHB18P-202ENST00000526308 KLHDC4Q8TBB5 520 aa16.2■□□□□ 0.18
PCDHB18P-202ENST00000526308 EDC3Q96F86 508 aaKnown RBP16.2■□□□□ 0.18
PCDHB18P-202ENST00000526308 FEZ1Q99689 392 aa16.2■□□□□ 0.18
PCDHB18P-202ENST00000526308 LRRC2Q9BYS8 371 aa16.2■□□□□ 0.18
PCDHB18P-202ENST00000526308 PPFIA3O75145 1194 aa16.2■□□□□ 0.18
PCDHB18P-202ENST00000526308 PLA2G4DQ86XP0 818 aa16.2■□□□□ 0.18
PCDHB18P-202ENST00000526308 KIF20AO95235 890 aa16.2■□□□□ 0.18
PCDHB18P-202ENST00000526308 CCDC144BQ3MJ40 725 aa16.2■□□□□ 0.18
PCDHB18P-202ENST00000526308 CCDC144CPQ8IYA2 1237 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms