RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 POTEAQ6S8J7 498 aa6.9□□□□□ -1.3
ECHDC1-219ENST00000526299 CHMP3Q9Y3E7 222 aa6.9□□□□□ -1.3
ECHDC1-219ENST00000526299 HIRAP54198 1017 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-219ENST00000526299 CLDN10P78369 228 aa6.89□□□□□ -1.31
ECHDC1-219ENST00000526299 PSAPL1Q6NUJ1 521 aa6.89□□□□□ -1.31
ECHDC1-219ENST00000526299 TRIM50Q86XT4 487 aa6.89□□□□□ -1.31
ECHDC1-219ENST00000526299 DMRTC2Q8IXT2 367 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-219ENST00000526299 FMR1NBQ8N0W7 255 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-219ENST00000526299 NAGPAQ9UK23 515 aa6.89□□□□□ -1.31
ECHDC1-219ENST00000526299 USP21Q9UK80 565 aa6.89□□□□□ -1.31
ECHDC1-219ENST00000526299 BTLAQ7Z6A9 289 aa6.88□□□□□ -1.31
ECHDC1-219ENST00000526299 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-219ENST00000526299 DNAJB12Q9NXW2 375 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-219ENST00000526299 PPP1R12BO60237 982 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-219ENST00000526299 ILDR2Q71H61 639 aa6.87□□□□□ -1.31
ECHDC1-219ENST00000526299 ALDH16A1Q8IZ83 802 aa6.87□□□□□ -1.31
ECHDC1-219ENST00000526299 TSEN2Q8NCE0 465 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-219ENST00000526299 USP17L3A6NCW0 530 aa6.86□□□□□ -1.31
ECHDC1-219ENST00000526299 USP17L4A6NCW7 530 aa6.86□□□□□ -1.31
ECHDC1-219ENST00000526299 C21orf2O43822 256 aa6.86□□□□□ -1.31
ECHDC1-219ENST00000526299 SLC24A1O60721 1099 aa6.86□□□□□ -1.31
ECHDC1-219ENST00000526299 ATP1A2P50993 1020 aa6.86□□□□□ -1.31
ECHDC1-219ENST00000526299 USP17L2Q6R6M4 530 aa6.86□□□□□ -1.31
ECHDC1-219ENST00000526299 USP17L1Q7RTZ2 530 aa6.86□□□□□ -1.31
ECHDC1-219ENST00000526299 RGS9O75916 674 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-219ENST00000526299 OGFOD1Q8N543 542 aa6.85□□□□□ -1.31
ECHDC1-219ENST00000526299 POM121Q96HA1 1249 aa6.85□□□□□ -1.31
ECHDC1-219ENST00000526299 NGLY1Q96IV0 654 aa6.85□□□□□ -1.31
ECHDC1-219ENST00000526299 GSX2Q9BZM3 304 aa6.85□□□□□ -1.31
ECHDC1-219ENST00000526299 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-219ENST00000526299 M0R2N6 131 aa6.84□□□□□ -1.31
ECHDC1-219ENST00000526299 NFKB1P19838 968 aa6.84□□□□□ -1.31
ECHDC1-219ENST00000526299 PLEKHM2Q8IWE5 1019 aa6.84□□□□□ -1.31
ECHDC1-219ENST00000526299 ADAMTS19Q8TE59 1207 aa6.84□□□□□ -1.31
ECHDC1-219ENST00000526299 PNMA5Q96PV4 448 aa6.84□□□□□ -1.31
ECHDC1-219ENST00000526299 ATAD2Q6PL18 1390 aa6.83□□□□□ -1.32
ECHDC1-219ENST00000526299 POM121CA8CG34 1229 aa6.83□□□□□ -1.32
ECHDC1-219ENST00000526299 IREB2P48200 963 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-219ENST00000526299 MSL1Q68DK7 614 aa6.83□□□□□ -1.32
ECHDC1-219ENST00000526299 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
ECHDC1-219ENST00000526299 LARGE2Q8N3Y3 721 aa6.83□□□□□ -1.32
ECHDC1-219ENST00000526299 CHMP7Q8WUX9 453 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-219ENST00000526299 WFDC12Q8WWY7 111 aa6.83□□□□□ -1.32
ECHDC1-219ENST00000526299 ZNF594Q96JF6 807 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-219ENST00000526299 UCN2Q96RP3 112 aa6.83□□□□□ -1.32
ECHDC1-219ENST00000526299 PALM3A6NDB9 673 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 DKK1O94907 266 aa6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 CPB1P15086 417 aa6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 NOS3P29474 1203 aa6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 PLAURQ03405 335 aa6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 CCINQ13939 588 aa6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 TPRNQ4KMQ1 711 aa6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 FAM35AQ86V20 835 aa6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 FBXO11Q86XK2 927 aa6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 C2orf49Q9BVC5 232 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 EFCC1Q9HA90 598 aa6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 MKRN1Q9UHC7 482 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-219ENST00000526299 GRNP28799 593 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 GRIK5Q16478 980 aa6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 WWC1Q8IX03 1113 aa6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 SIX5Q8N196 739 aa6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 SCG3Q8WXD2 468 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 MEGF10Q96KG7 1140 aa6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 LPIN3Q9BQK8 851 aa6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 KRTAP9-9Q9BYP9 154 aa6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 RNF112Q9ULX5 631 aa6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 BCS1LQ9Y276 419 aa6.81□□□□□ -1.32
ECHDC1-219ENST00000526299 HIF1AQ16665 826 aa6.8□□□□□ -1.32
ECHDC1-219ENST00000526299 PERM1Q5SV97 790 aa6.8□□□□□ -1.32
ECHDC1-219ENST00000526299 IER5Q5VY09 327 aa6.8□□□□□ -1.32
ECHDC1-219ENST00000526299 STAG2Q8N3U4 1231 aa6.8□□□□□ -1.32
ECHDC1-219ENST00000526299 DMGDHQ9UI17 866 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-219ENST00000526299 ZBTB42B2RXF5 422 aa6.79□□□□□ -1.32
ECHDC1-219ENST00000526299 ATP9BO43861 1147 aa6.79□□□□□ -1.32
ECHDC1-219ENST00000526299 MLLT1Q03111 559 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-219ENST00000526299 HDGFL1Q5TGJ6 251 aa6.79□□□□□ -1.32
ECHDC1-219ENST00000526299 DTWD1Q8N5C7 304 aa6.79□□□□□ -1.32
ECHDC1-219ENST00000526299 GAS2L2Q8NHY3 880 aa6.79□□□□□ -1.32
ECHDC1-219ENST00000526299 TGFBR3LH3BV60 316 aa6.78□□□□□ -1.32
ECHDC1-219ENST00000526299 LGR5O75473 907 aa6.78□□□□□ -1.32
ECHDC1-219ENST00000526299 KRT25Q7Z3Z0 450 aa6.78□□□□□ -1.32
ECHDC1-219ENST00000526299 GOLGA2P5Q9HBQ8 144 aa6.78□□□□□ -1.32
ECHDC1-219ENST00000526299 FRRS1LQ9P0K9 344 aa6.78□□□□□ -1.32
ECHDC1-219ENST00000526299 ZFATQ9P243 1243 aa6.78□□□□□ -1.32
ECHDC1-219ENST00000526299 RBM19Q9Y4C8 960 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-219ENST00000526299 TARSP26639 723 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-219ENST00000526299 RTN1Q16799 776 aa6.77□□□□□ -1.33
ECHDC1-219ENST00000526299 MCTP1Q6DN14 999 aa6.77□□□□□ -1.33
ECHDC1-219ENST00000526299 ELMSAN1Q6PJG2 1045 aa6.77□□□□□ -1.33
ECHDC1-219ENST00000526299 IGF2-ASQ6U949 168 aa6.77□□□□□ -1.33
ECHDC1-219ENST00000526299 PRR23CQ6ZRP0 262 aa6.77□□□□□ -1.33
ECHDC1-219ENST00000526299 WFDC8Q8IUA0 241 aa6.77□□□□□ -1.33
ECHDC1-219ENST00000526299 BTBD11A6QL63 1104 aa6.76□□□□□ -1.33
ECHDC1-219ENST00000526299 DEAF1O75398 565 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-219ENST00000526299 MAP3K6O95382 1288 aa6.76□□□□□ -1.33
ECHDC1-219ENST00000526299 PCSK7Q16549 785 aa6.76□□□□□ -1.33
ECHDC1-219ENST00000526299 DHX32Q7L7V1 743 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-219ENST00000526299 IFT43Q96FT9 208 aa6.76□□□□□ -1.33
ECHDC1-219ENST00000526299 RAD21O60216 631 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms