RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 ANKRD36CQ5JPF3 1778 aa17.42■□□□□ 0.38
USH1C-203ENST00000526181 NLRP10Q86W26 655 aa17.41■□□□□ 0.38
USH1C-203ENST00000526181 FAM9BQ8IZU0 186 aa17.41■□□□□ 0.38
USH1C-203ENST00000526181 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
USH1C-203ENST00000526181 UTP14AQ9BVJ6 771 aaKnown RBP17.41■□□□□ 0.38
USH1C-203ENST00000526181 PHAXQ9H814 394 aaKnown RBP17.41■□□□□ 0.38
USH1C-203ENST00000526181 TCIRG1Q13488 830 aa17.4■□□□□ 0.38
USH1C-203ENST00000526181 HSP90AB3PQ58FF7 597 aa17.4■□□□□ 0.38
USH1C-203ENST00000526181 SLC51AQ86UW1 340 aa17.4■□□□□ 0.38
USH1C-203ENST00000526181 HYPKQ9NX55 129 aa17.4■□□□□ 0.38
USH1C-203ENST00000526181 FER1L6Q2WGJ9 1857 aa17.39■□□□□ 0.38
USH1C-203ENST00000526181 ANKRD13DQ6ZTN6 518 aa17.39■□□□□ 0.37
USH1C-203ENST00000526181 SYNE4Q8N205 404 aa17.39■□□□□ 0.37
USH1C-203ENST00000526181 TAOK3Q9H2K8 898 aa17.39■□□□□ 0.37
USH1C-203ENST00000526181 CCDC93Q567U6 631 aa17.38■□□□□ 0.37
USH1C-203ENST00000526181 RPGRQ92834 1020 aaKnown RBP17.38■□□□□ 0.37
USH1C-203ENST00000526181 LTBP3Q9NS15 1303 aa17.38■□□□□ 0.37
USH1C-203ENST00000526181 ATP5J2-PTCD1G3V325 749 aa17.37■□□□□ 0.37
USH1C-203ENST00000526181 TCERG1O14776 1098 aaKnown RBP17.37■□□□□ 0.37
USH1C-203ENST00000526181 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
USH1C-203ENST00000526181 HOXA10P31260 410 aaPredicted RBP17.37■□□□□ 0.37
USH1C-203ENST00000526181 SOGA3Q5TF21 947 aa17.37■□□□□ 0.37
USH1C-203ENST00000526181 TRMT112Q9UI30 125 aaKnown RBP17.37■□□□□ 0.37
USH1C-203ENST00000526181 KDM2BQ8NHM5 1336 aa17.37■□□□□ 0.37
USH1C-203ENST00000526181 HCLS1P14317 486 aaPredicted RBP17.36■□□□□ 0.37
USH1C-203ENST00000526181 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
USH1C-203ENST00000526181 SLC10A5Q5PT55 438 aa17.36■□□□□ 0.37
USH1C-203ENST00000526181 ISCA1Q9BUE6 129 aa17.36■□□□□ 0.37
USH1C-203ENST00000526181 IL16Q14005 1332 aa17.36■□□□□ 0.37
USH1C-203ENST00000526181 FANCIQ9NVI1 1328 aa17.36■□□□□ 0.37
USH1C-203ENST00000526181 ZC3H4Q9UPT8 1303 aaKnown RBP17.36■□□□□ 0.37
USH1C-203ENST00000526181 SNED1Q8TER0 1413 aa17.36■□□□□ 0.37
USH1C-203ENST00000526181 RBM17Q96I25 401 aaKnown RBP17.35■□□□□ 0.37
USH1C-203ENST00000526181 NLRP3Q96P20 1036 aa17.35■□□□□ 0.37
USH1C-203ENST00000526181 RRAGCQ9HB90 399 aa17.35■□□□□ 0.37
USH1C-203ENST00000526181 RNF123Q5XPI4 1314 aa17.35■□□□□ 0.37
USH1C-203ENST00000526181 SH3TC1Q8TE82 1336 aa17.35■□□□□ 0.37
USH1C-203ENST00000526181 GLTPD2A6NH11 291 aa17.34■□□□□ 0.37
USH1C-203ENST00000526181 FKBP4Q02790 459 aaKnown RBP eCLIP17.34■□□□□ 0.37
USH1C-203ENST00000526181 GOLGA2Q08379 1002 aa17.34■□□□□ 0.37
USH1C-203ENST00000526181 TWISTNBQ3B726 338 aaPredicted RBP17.34■□□□□ 0.37
USH1C-203ENST00000526181 CCDC30Q5VVM6 783 aa17.34■□□□□ 0.37
USH1C-203ENST00000526181 RIC3Q7Z5B4 369 aa17.34■□□□□ 0.37
USH1C-203ENST00000526181 CRAMP1Q96RY5 1269 aa17.34■□□□□ 0.37
USH1C-203ENST00000526181 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
USH1C-203ENST00000526181 ZNF277Q9NRM2 450 aaPredicted RBP17.34■□□□□ 0.37
USH1C-203ENST00000526181 LAMB2P55268 1798 aa17.33■□□□□ 0.37
USH1C-203ENST00000526181 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
USH1C-203ENST00000526181 FAM89AQ96GI7 184 aa17.33■□□□□ 0.36
USH1C-203ENST00000526181 CCDC88AQ3V6T2 1871 aa17.33■□□□□ 0.36
USH1C-203ENST00000526181 ABCC4O15439 1325 aa17.32■□□□□ 0.36
USH1C-203ENST00000526181 RTL5Q5HYW3 569 aaPredicted RBP17.32■□□□□ 0.36
USH1C-203ENST00000526181 WDR63Q8IWG1 891 aa17.32■□□□□ 0.36
USH1C-203ENST00000526181 RTKN2Q8IZC4 609 aa17.32■□□□□ 0.36
USH1C-203ENST00000526181 MYD88Q99836 296 aa17.32■□□□□ 0.36
USH1C-203ENST00000526181 DDX60Q8IY21 1712 aaKnown RBP17.32■□□□□ 0.36
USH1C-203ENST00000526181 TOMM70O94826 608 aa17.31■□□□□ 0.36
USH1C-203ENST00000526181 G2E3Q7L622 706 aa17.3■□□□□ 0.36
USH1C-203ENST00000526181 COL4A1P02462 1669 aa17.29■□□□□ 0.36
USH1C-203ENST00000526181 COL4A5P29400 1685 aa17.29■□□□□ 0.36
USH1C-203ENST00000526181 EXOSC9Q06265 439 aaKnown RBP17.29■□□□□ 0.36
USH1C-203ENST00000526181 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
USH1C-203ENST00000526181 STK31Q9BXU1 1019 aa17.29■□□□□ 0.36
USH1C-203ENST00000526181 MAP3K2Q9Y2U5 619 aa17.29■□□□□ 0.36
USH1C-203ENST00000526181 DICER1Q9UPY3 1922 aaKnown RBP17.29■□□□□ 0.36
USH1C-203ENST00000526181 ZNF541Q9H0D2 1346 aa17.28■□□□□ 0.36
USH1C-203ENST00000526181 POTECB2RU33 542 aa17.28■□□□□ 0.36
USH1C-203ENST00000526181 DDNO94850 711 aaPredicted RBP17.28■□□□□ 0.36
USH1C-203ENST00000526181 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
USH1C-203ENST00000526181 SLC4A2P04920 1241 aa17.28■□□□□ 0.36
USH1C-203ENST00000526181 IARSP41252 1262 aaKnown RBP17.28■□□□□ 0.36
USH1C-203ENST00000526181 DPY19L2Q6NUT2 758 aa17.28■□□□□ 0.36
USH1C-203ENST00000526181 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
USH1C-203ENST00000526181 PSMD1Q99460 953 aa17.28■□□□□ 0.36
USH1C-203ENST00000526181 METTL22Q9BUU2 404 aaPredicted RBP17.28■□□□□ 0.36
USH1C-203ENST00000526181 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
USH1C-203ENST00000526181 WDR90Q96KV7 1748 aa17.27■□□□□ 0.36
USH1C-203ENST00000526181 PI4KAP2A4QPH2 592 aa17.27■□□□□ 0.36
USH1C-203ENST00000526181 VAMP4O75379 141 aa17.27■□□□□ 0.36
USH1C-203ENST00000526181 HSPA6P17066 643 aa17.27■□□□□ 0.36
USH1C-203ENST00000526181 CC2D2BQ6DHV5 1058 aa17.27■□□□□ 0.36
USH1C-203ENST00000526181 PI4KAP1Q8N8J0 262 aa17.27■□□□□ 0.36
USH1C-203ENST00000526181 JARID2Q92833 1246 aaPredicted RBP17.27■□□□□ 0.36
USH1C-203ENST00000526181 ATP6V0A2Q9Y487 856 aa17.27■□□□□ 0.36
USH1C-203ENST00000526181 IRS4O14654 1257 aaPredicted RBP17.26■□□□□ 0.35
USH1C-203ENST00000526181 VEGFAP15692 232 aaPredicted RBP17.26■□□□□ 0.35
USH1C-203ENST00000526181 GRAPQ13588 217 aa17.26■□□□□ 0.35
USH1C-203ENST00000526181 KSR2Q6VAB6 950 aa17.26■□□□□ 0.35
USH1C-203ENST00000526181 DDX46Q7L014 1031 aaKnown RBP17.26■□□□□ 0.35
USH1C-203ENST00000526181 ZBTB38Q8NAP3 1195 aaPredicted RBP17.26■□□□□ 0.35
USH1C-203ENST00000526181 RBM46Q8TBY0 533 aaKnown RBP17.26■□□□□ 0.35
USH1C-203ENST00000526181 GRAPLQ8TC17 118 aaPredicted RBP17.26■□□□□ 0.35
USH1C-203ENST00000526181 ZNF521Q96K83 1311 aa17.25■□□□□ 0.35
USH1C-203ENST00000526181 IGKV5-2P06315 115 aa17.25■□□□□ 0.35
USH1C-203ENST00000526181 SF3B3Q15393 1217 aaKnown RBP17.25■□□□□ 0.35
USH1C-203ENST00000526181 CCDC191Q8NCU4 936 aa17.25■□□□□ 0.35
USH1C-203ENST00000526181 CWC25Q9NXE8 425 aaPredicted RBP17.25■□□□□ 0.35
USH1C-203ENST00000526181 BBOX1O75936 387 aa17.24■□□□□ 0.35
USH1C-203ENST00000526181 CWF19L2Q2TBE0 894 aaKnown RBP17.24■□□□□ 0.35
USH1C-203ENST00000526181 CELF1Q92879 486 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms