RNA–Protein interactions for RNA: ENST00000525485.5

NCAPD3-202, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 4

Gene NCAPD3, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-202ENST00000525485 FSTL1Q12841 308 aa28.99■■■□□ 2.23
NCAPD3-202ENST00000525485 HDGFL1Q5TGJ6 251 aa28.99■■■□□ 2.23
NCAPD3-202ENST00000525485 RTKN2Q8IZC4 609 aa28.99■■■□□ 2.23
NCAPD3-202ENST00000525485 MBIPQ9NS73 344 aa28.99■■■□□ 2.23
NCAPD3-202ENST00000525485 WDR90Q96KV7 1748 aa28.99■■■□□ 2.23
NCAPD3-202ENST00000525485 RNF123Q5XPI4 1314 aa28.98■■■□□ 2.23
NCAPD3-202ENST00000525485 FKBP4Q02790 459 aaKnown RBP eCLIP28.98■■■□□ 2.23
NCAPD3-202ENST00000525485 IFT57Q9NWB7 429 aa28.98■■■□□ 2.23
NCAPD3-202ENST00000525485 CHPF2Q9P2E5 772 aa28.98■■■□□ 2.23
NCAPD3-202ENST00000525485 APLP1P51693 650 aa28.97■■■□□ 2.23
NCAPD3-202ENST00000525485 RPGRQ92834 1020 aaKnown RBP28.97■■■□□ 2.23
NCAPD3-202ENST00000525485 UTP14AQ9BVJ6 771 aaKnown RBP28.97■■■□□ 2.23
NCAPD3-202ENST00000525485 GNAI1P63096 354 aa28.96■■■□□ 2.23
NCAPD3-202ENST00000525485 AIMP1Q12904 312 aaKnown RBP28.96■■■□□ 2.23
NCAPD3-202ENST00000525485 DBF4Q9UBU7 674 aaPredicted RBP28.96■■■□□ 2.23
NCAPD3-202ENST00000525485 SLC10A5Q5PT55 438 aa28.95■■■□□ 2.22
NCAPD3-202ENST00000525485 DUSP27Q5VZP5 1158 aa28.95■■■□□ 2.22
NCAPD3-202ENST00000525485 CC2D2BQ6DHV5 1058 aa28.95■■■□□ 2.22
NCAPD3-202ENST00000525485 SNED1Q8TER0 1413 aa28.94■■■□□ 2.22
NCAPD3-202ENST00000525485 TCIRG1Q13488 830 aa28.94■■■□□ 2.22
NCAPD3-202ENST00000525485 CRAMP1Q96RY5 1269 aa28.94■■■□□ 2.22
NCAPD3-202ENST00000525485 ZNF316A6NFI3 1004 aaPredicted RBP28.93■■■□□ 2.22
NCAPD3-202ENST00000525485 CCDC184Q52MB2 194 aa28.93■■■□□ 2.22
NCAPD3-202ENST00000525485 OLFM4Q6UX06 510 aa28.93■■■□□ 2.22
NCAPD3-202ENST00000525485 NLRP10Q86W26 655 aa28.93■■■□□ 2.22
NCAPD3-202ENST00000525485 RBM17Q96I25 401 aaKnown RBP28.93■■■□□ 2.22
NCAPD3-202ENST00000525485 NLRP3Q96P20 1036 aa28.93■■■□□ 2.22
NCAPD3-202ENST00000525485 SMC1BQ8NDV3 1235 aa28.92■■■□□ 2.22
NCAPD3-202ENST00000525485 HYPKQ9NX55 129 aa28.92■■■□□ 2.22
NCAPD3-202ENST00000525485 POTECB2RU33 542 aa28.91■■■□□ 2.22
NCAPD3-202ENST00000525485 GRIPAP1Q4V328 841 aa28.91■■■□□ 2.22
NCAPD3-202ENST00000525485 PLBD2Q8NHP8 589 aa28.91■■■□□ 2.22
NCAPD3-202ENST00000525485 PSMD1Q99460 953 aa28.91■■■□□ 2.22
NCAPD3-202ENST00000525485 C3orf67Q6ZVT6 689 aa28.9■■■□□ 2.22
NCAPD3-202ENST00000525485 ZNF277Q9NRM2 450 aaPredicted RBP28.9■■■□□ 2.22
NCAPD3-202ENST00000525485 ANKRD13DQ6ZTN6 518 aa28.89■■■□□ 2.22
NCAPD3-202ENST00000525485 IARSP41252 1262 aaKnown RBP28.87■■■□□ 2.21
NCAPD3-202ENST00000525485 SYNE4Q8N205 404 aa28.87■■■□□ 2.21
NCAPD3-202ENST00000525485 LAMB2P55268 1798 aa28.86■■■□□ 2.21
NCAPD3-202ENST00000525485 PPEF1O14829 653 aaPredicted RBP28.86■■■□□ 2.21
NCAPD3-202ENST00000525485 DDNO94850 711 aaPredicted RBP28.86■■■□□ 2.21
NCAPD3-202ENST00000525485 CCDC27Q2M243 656 aa28.86■■■□□ 2.21
NCAPD3-202ENST00000525485 TRMT112Q9UI30 125 aaKnown RBP28.86■■■□□ 2.21
NCAPD3-202ENST00000525485 SH3TC1Q8TE82 1336 aa28.86■■■□□ 2.21
NCAPD3-202ENST00000525485 ANP32CO43423 234 aa28.85■■■□□ 2.21
NCAPD3-202ENST00000525485 L3MBTL3Q96JM7 780 aaPredicted RBP28.85■■■□□ 2.21
NCAPD3-202ENST00000525485 ISCA1Q9BUE6 129 aa28.85■■■□□ 2.21
NCAPD3-202ENST00000525485 NCBP3Q53F19 620 aaKnown RBP28.84■■■□□ 2.21
NCAPD3-202ENST00000525485 CHMP4AQ9BY43 222 aa28.84■■■□□ 2.21
NCAPD3-202ENST00000525485 SCN4AP35499 1836 aa28.83■■■□□ 2.21
NCAPD3-202ENST00000525485 FZD9O00144 591 aa28.82■■■□□ 2.2
NCAPD3-202ENST00000525485 DNAJC5GQ8N7S2 189 aa28.82■■■□□ 2.2
NCAPD3-202ENST00000525485 MRS2Q9HD23 443 aa28.82■■■□□ 2.2
NCAPD3-202ENST00000525485 ABCC4O15439 1325 aa28.82■■■□□ 2.2
NCAPD3-202ENST00000525485 IQCA1LA6NCM1 817 aa28.81■■■□□ 2.2
NCAPD3-202ENST00000525485 HCLS1P14317 486 aaPredicted RBP28.81■■■□□ 2.2
NCAPD3-202ENST00000525485 TRIM28Q13263 835 aaKnown RBP28.81■■■□□ 2.2
NCAPD3-202ENST00000525485 C8orf58Q8NAV2 365 aa28.81■■■□□ 2.2
NCAPD3-202ENST00000525485 ATP6V0A2Q9Y487 856 aa28.81■■■□□ 2.2
NCAPD3-202ENST00000525485 ZNF541Q9H0D2 1346 aa28.8■■■□□ 2.2
NCAPD3-202ENST00000525485 ELL2O00472 640 aaPredicted RBP28.8■■■□□ 2.2
NCAPD3-202ENST00000525485 JDP2Q8WYK2 163 aa28.8■■■□□ 2.2
NCAPD3-202ENST00000525485 TMX4Q9H1E5 349 aaPredicted RBP28.8■■■□□ 2.2
NCAPD3-202ENST00000525485 BBOX1O75936 387 aa28.79■■■□□ 2.2
NCAPD3-202ENST00000525485 WWC1Q8IX03 1113 aa28.79■■■□□ 2.2
NCAPD3-202ENST00000525485 DDX60Q8IY21 1712 aaKnown RBP28.79■■■□□ 2.2
NCAPD3-202ENST00000525485 GOLGA2Q08379 1002 aa28.78■■■□□ 2.2
NCAPD3-202ENST00000525485 ATP5J2-PTCD1G3V325 749 aa28.77■■■□□ 2.2
NCAPD3-202ENST00000525485 CCDC30Q5VVM6 783 aa28.77■■■□□ 2.2
NCAPD3-202ENST00000525485 DDX46Q7L014 1031 aaKnown RBP28.77■■■□□ 2.2
NCAPD3-202ENST00000525485 PHAXQ9H814 394 aaKnown RBP28.77■■■□□ 2.2
NCAPD3-202ENST00000525485 IL16Q14005 1332 aa28.76■■■□□ 2.19
NCAPD3-202ENST00000525485 TCERG1O14776 1098 aaKnown RBP28.76■■■□□ 2.19
NCAPD3-202ENST00000525485 RIC3Q7Z5B4 369 aa28.76■■■□□ 2.19
NCAPD3-202ENST00000525485 VPS33BQ9H267 617 aa28.76■■■□□ 2.19
NCAPD3-202ENST00000525485 COL4A5P29400 1685 aa28.76■■■□□ 2.19
NCAPD3-202ENST00000525485 GRAPQ13588 217 aa28.75■■■□□ 2.19
NCAPD3-202ENST00000525485 SLC51AQ86UW1 340 aa28.75■■■□□ 2.19
NCAPD3-202ENST00000525485 SP8Q8IXZ3 490 aa28.75■■■□□ 2.19
NCAPD3-202ENST00000525485 GPC2Q8N158 579 aa28.75■■■□□ 2.19
NCAPD3-202ENST00000525485 GRAPLQ8TC17 118 aaPredicted RBP28.75■■■□□ 2.19
NCAPD3-202ENST00000525485 LARGE2Q8N3Y3 721 aa28.74■■■□□ 2.19
NCAPD3-202ENST00000525485 TSPYL6Q8N831 410 aa28.74■■■□□ 2.19
NCAPD3-202ENST00000525485 FAM89AQ96GI7 184 aa28.74■■■□□ 2.19
NCAPD3-202ENST00000525485 TAF1DQ9H5J8 278 aaPredicted RBP28.74■■■□□ 2.19
NCAPD3-202ENST00000525485 SF3B3Q15393 1217 aaKnown RBP28.73■■■□□ 2.19
NCAPD3-202ENST00000525485 CHADLQ6NUI6 762 aa28.73■■■□□ 2.19
NCAPD3-202ENST00000525485 TMC4Q7Z404 712 aa28.73■■■□□ 2.19
NCAPD3-202ENST00000525485 TSR2Q969E8 191 aaKnown RBP28.73■■■□□ 2.19
NCAPD3-202ENST00000525485 RTFDC1Q9BY42 306 aaPredicted RBP28.73■■■□□ 2.19
NCAPD3-202ENST00000525485 EIF6P56537 245 aaKnown RBP28.72■■■□□ 2.19
NCAPD3-202ENST00000525485 HTRA3P83110 453 aa28.72■■■□□ 2.19
NCAPD3-202ENST00000525485 SUPT20HQ8NEM7 779 aa28.72■■■□□ 2.19
NCAPD3-202ENST00000525485 HACL1Q9UJ83 578 aa28.72■■■□□ 2.19
NCAPD3-202ENST00000525485 DDX58O95786 925 aaKnown RBP28.71■■■□□ 2.19
NCAPD3-202ENST00000525485 LDHDQ86WU2 507 aa28.71■■■□□ 2.19
NCAPD3-202ENST00000525485 KLRG1Q96E93 195 aa28.71■■■□□ 2.19
NCAPD3-202ENST00000525485 TAF1P21675 1872 aa28.71■■■□□ 2.19
NCAPD3-202ENST00000525485 POTEIP0CG38 1075 aa28.7■■■□□ 2.18
NCAPD3-202ENST00000525485 POTEJP0CG39 1038 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms