RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 DDX58O95786 925 aaKnown RBP16.63■□□□□ 0.25
CTSB-209ENST00000525315 STYK1Q6J9G0 422 aa16.63■□□□□ 0.25
CTSB-209ENST00000525315 G2E3Q7L622 706 aa16.63■□□□□ 0.25
CTSB-209ENST00000525315 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
CTSB-209ENST00000525315 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
CTSB-209ENST00000525315 UTP14AQ9BVJ6 771 aaKnown RBP16.63■□□□□ 0.25
CTSB-209ENST00000525315 SLX4Q8IY92 1834 aa16.63■□□□□ 0.25
CTSB-209ENST00000525315 CACNA1SQ13698 1873 aa16.63■□□□□ 0.25
CTSB-209ENST00000525315 KSR2Q6VAB6 950 aa16.62■□□□□ 0.25
CTSB-209ENST00000525315 ZNF622Q969S3 477 aaKnown RBP eCLIP16.62■□□□□ 0.25
CTSB-209ENST00000525315 MASTLQ96GX5 879 aa16.62■□□□□ 0.25
CTSB-209ENST00000525315 RNF123Q5XPI4 1314 aa16.62■□□□□ 0.25
CTSB-209ENST00000525315 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
CTSB-209ENST00000525315 CRY2Q49AN0 593 aa16.61■□□□□ 0.25
CTSB-209ENST00000525315 CNKSR1Q969H4 720 aa16.61■□□□□ 0.25
CTSB-209ENST00000525315 METTL22Q9BUU2 404 aaPredicted RBP16.61■□□□□ 0.25
CTSB-209ENST00000525315 SBF1O95248 1867 aa16.61■□□□□ 0.25
CTSB-209ENST00000525315 TNRC6CQ9HCJ0 1690 aaKnown RBP16.6■□□□□ 0.25
CTSB-209ENST00000525315 ATP5J2-PTCD1G3V325 749 aa16.6■□□□□ 0.25
CTSB-209ENST00000525315 NPR1P16066 1061 aa16.6■□□□□ 0.25
CTSB-209ENST00000525315 YY1P25490 414 aa16.6■□□□□ 0.25
CTSB-209ENST00000525315 ABCC12Q96J65 1359 aa16.6■□□□□ 0.25
CTSB-209ENST00000525315 LAMB2P55268 1798 aa16.59■□□□□ 0.25
CTSB-209ENST00000525315 PI4KAP2A4QPH2 592 aa16.59■□□□□ 0.25
CTSB-209ENST00000525315 FLIIQ13045 1269 aa16.59■□□□□ 0.25
CTSB-209ENST00000525315 ARHGAP27Q6ZUM4 889 aa16.59■□□□□ 0.25
CTSB-209ENST00000525315 PI4KAP1Q8N8J0 262 aa16.59■□□□□ 0.25
CTSB-209ENST00000525315 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
CTSB-209ENST00000525315 MAP3K2Q9Y2U5 619 aa16.59■□□□□ 0.25
CTSB-209ENST00000525315 ADCY9O60503 1353 aa16.59■□□□□ 0.25
CTSB-209ENST00000525315 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
CTSB-209ENST00000525315 HOXA10P31260 410 aaPredicted RBP16.58■□□□□ 0.24
CTSB-209ENST00000525315 SYNE4Q8N205 404 aa16.58■□□□□ 0.24
CTSB-209ENST00000525315 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
CTSB-209ENST00000525315 NLRP3Q96P20 1036 aa16.58■□□□□ 0.24
CTSB-209ENST00000525315 MYD88Q99836 296 aa16.58■□□□□ 0.24
CTSB-209ENST00000525315 FER1L6Q2WGJ9 1857 aa16.57■□□□□ 0.24
CTSB-209ENST00000525315 DDX60Q8IY21 1712 aaKnown RBP16.57■□□□□ 0.24
CTSB-209ENST00000525315 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
CTSB-209ENST00000525315 ALDH1B1P30837 517 aa16.57■□□□□ 0.24
CTSB-209ENST00000525315 ZNF428Q96B54 188 aa16.57■□□□□ 0.24
CTSB-209ENST00000525315 IGKV5-2P06315 115 aa16.56■□□□□ 0.24
CTSB-209ENST00000525315 C3orf67Q6ZVT6 689 aa16.56■□□□□ 0.24
CTSB-209ENST00000525315 C7orf43Q8WVR3 580 aa16.56■□□□□ 0.24
CTSB-209ENST00000525315 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
CTSB-209ENST00000525315 HCLS1P14317 486 aaPredicted RBP16.55■□□□□ 0.24
CTSB-209ENST00000525315 HNRNPUQ00839 825 aaKnown RBP eCLIP16.55■□□□□ 0.24
CTSB-209ENST00000525315 FKBP5Q13451 457 aaPredicted RBP16.55■□□□□ 0.24
CTSB-209ENST00000525315 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
CTSB-209ENST00000525315 ZBTB38Q8NAP3 1195 aaPredicted RBP16.55■□□□□ 0.24
CTSB-209ENST00000525315 CRAMP1Q96RY5 1269 aa16.55■□□□□ 0.24
CTSB-209ENST00000525315 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
CTSB-209ENST00000525315 C21orf2O43822 256 aa16.54■□□□□ 0.24
CTSB-209ENST00000525315 CT47B1P0C2W7 299 aaPredicted RBP16.54■□□□□ 0.24
CTSB-209ENST00000525315 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
CTSB-209ENST00000525315 MRPL50Q8N5N7 158 aaKnown RBP16.54■□□□□ 0.24
CTSB-209ENST00000525315 DNAAF4Q8WXU2 420 aa16.54■□□□□ 0.24
CTSB-209ENST00000525315 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
CTSB-209ENST00000525315 TAF1P21675 1872 aa16.53■□□□□ 0.24
CTSB-209ENST00000525315 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
CTSB-209ENST00000525315 ALDH1L2Q3SY69 923 aa16.53■□□□□ 0.24
CTSB-209ENST00000525315 RPGRQ92834 1020 aaKnown RBP16.53■□□□□ 0.24
CTSB-209ENST00000525315 NEURL1BA8MQ27 555 aa16.52■□□□□ 0.24
CTSB-209ENST00000525315 IRS4O14654 1257 aaPredicted RBP16.52■□□□□ 0.24
CTSB-209ENST00000525315 SF3B3Q15393 1217 aaKnown RBP16.52■□□□□ 0.24
CTSB-209ENST00000525315 SOGA3Q5TF21 947 aa16.52■□□□□ 0.24
CTSB-209ENST00000525315 SSH1Q8WYL5 1049 aa16.52■□□□□ 0.24
CTSB-209ENST00000525315 DICER1Q9UPY3 1922 aaKnown RBP16.52■□□□□ 0.23
CTSB-209ENST00000525315 CWF19L2Q2TBE0 894 aaKnown RBP16.51■□□□□ 0.23
CTSB-209ENST00000525315 LINS1Q8NG48 757 aa16.51■□□□□ 0.23
CTSB-209ENST00000525315 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
CTSB-209ENST00000525315 MYH3P11055 1940 aa16.51■□□□□ 0.23
CTSB-209ENST00000525315 F6X3S4 739 aa16.5■□□□□ 0.23
CTSB-209ENST00000525315 H7C1W4 665 aa16.5■□□□□ 0.23
CTSB-209ENST00000525315 NFKBIEO00221 500 aa16.5■□□□□ 0.23
CTSB-209ENST00000525315 HSP90B1P14625 803 aaKnown RBP16.5■□□□□ 0.23
CTSB-209ENST00000525315 RTL5Q5HYW3 569 aaPredicted RBP16.5■□□□□ 0.23
CTSB-209ENST00000525315 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
CTSB-209ENST00000525315 LTBP3Q9NS15 1303 aa16.49■□□□□ 0.23
CTSB-209ENST00000525315 PRELPP51888 382 aa16.49■□□□□ 0.23
CTSB-209ENST00000525315 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
CTSB-209ENST00000525315 GCKRQ14397 625 aa16.49■□□□□ 0.23
CTSB-209ENST00000525315 BEND3Q5T5X7 828 aa16.49■□□□□ 0.23
CTSB-209ENST00000525315 ZNF784Q8NCA9 323 aaPredicted RBP16.49■□□□□ 0.23
CTSB-209ENST00000525315 JARID2Q92833 1246 aaPredicted RBP16.49■□□□□ 0.23
CTSB-209ENST00000525315 ZBED9Q6R2W3 1325 aa16.48■□□□□ 0.23
CTSB-209ENST00000525315 PDE8AO60658 829 aa16.48■□□□□ 0.23
CTSB-209ENST00000525315 BBOX1O75936 387 aa16.48■□□□□ 0.23
CTSB-209ENST00000525315 RASSF7Q02833 373 aa16.48■□□□□ 0.23
CTSB-209ENST00000525315 C9orf131Q5VYM1 1079 aa16.48■□□□□ 0.23
CTSB-209ENST00000525315 CC2D2BQ6DHV5 1058 aa16.48■□□□□ 0.23
CTSB-209ENST00000525315 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
CTSB-209ENST00000525315 ABCC4O15439 1325 aa16.47■□□□□ 0.23
CTSB-209ENST00000525315 PTPRCP08575 1304 aa16.47■□□□□ 0.23
CTSB-209ENST00000525315 LMNB1P20700 586 aa16.47■□□□□ 0.23
CTSB-209ENST00000525315 GRIPAP1Q4V328 841 aa16.47■□□□□ 0.23
CTSB-209ENST00000525315 CCDC93Q567U6 631 aa16.47■□□□□ 0.23
CTSB-209ENST00000525315 OLFM4Q6UX06 510 aa16.47■□□□□ 0.23
CTSB-209ENST00000525315 RTKN2Q8IZC4 609 aa16.47■□□□□ 0.23
CTSB-209ENST00000525315 SNED1Q8TER0 1413 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms