RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 AEBP1Q8IUX7 1158 aa11.39□□□□□ -0.59
DEPDC1-205ENST00000525124 KIAA1468Q9P260 1216 aa11.39□□□□□ -0.59
DEPDC1-205ENST00000525124 BCAMP50895 628 aa11.38□□□□□ -0.59
DEPDC1-205ENST00000525124 C6orf132Q5T0Z8 1188 aa11.38□□□□□ -0.59
DEPDC1-205ENST00000525124 NFATC2IPQ8NCF5 419 aa11.38□□□□□ -0.59
DEPDC1-205ENST00000525124 ANKK1Q8NFD2 765 aa11.38□□□□□ -0.59
DEPDC1-205ENST00000525124 PARP3Q9Y6F1 533 aa11.38□□□□□ -0.59
DEPDC1-205ENST00000525124 DICER1Q9UPY3 1922 aaKnown RBP11.38□□□□□ -0.59
DEPDC1-205ENST00000525124 KCPQ6ZWJ8 1503 aa11.38□□□□□ -0.59
DEPDC1-205ENST00000525124 USP42Q9H9J4 1324 aaKnown RBP11.37□□□□□ -0.59
DEPDC1-205ENST00000525124 DPYSL4O14531 572 aa11.37□□□□□ -0.59
DEPDC1-205ENST00000525124 HSPA6P17066 643 aa11.37□□□□□ -0.59
DEPDC1-205ENST00000525124 CRKLP46109 303 aaKnown RBP11.37□□□□□ -0.59
DEPDC1-205ENST00000525124 LAPTM4BQ86VI4 370 aa11.37□□□□□ -0.59
DEPDC1-205ENST00000525124 WDR90Q96KV7 1748 aa11.36□□□□□ -0.59
DEPDC1-205ENST00000525124 SOWAHBA6NEL2 793 aa11.36□□□□□ -0.59
DEPDC1-205ENST00000525124 KCNA3P22001 575 aa11.36□□□□□ -0.59
DEPDC1-205ENST00000525124 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
DEPDC1-205ENST00000525124 SLC52A2Q9HAB3 445 aa11.36□□□□□ -0.59
DEPDC1-205ENST00000525124 NPC1L1Q9UHC9 1359 aa11.36□□□□□ -0.59
DEPDC1-205ENST00000525124 SCN7AQ01118 1682 aa11.36□□□□□ -0.59
DEPDC1-205ENST00000525124 A0A0G2JLW4 131 aa11.35□□□□□ -0.59
DEPDC1-205ENST00000525124 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
DEPDC1-205ENST00000525124 PTCD1O75127 700 aaKnown RBP11.35□□□□□ -0.59
DEPDC1-205ENST00000525124 ITGBL1O95965 494 aaPredicted RBP11.35□□□□□ -0.59
DEPDC1-205ENST00000525124 EPAS1Q99814 870 aa11.35□□□□□ -0.59
DEPDC1-205ENST00000525124 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
DEPDC1-205ENST00000525124 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
DEPDC1-205ENST00000525124 ANKRD31Q8N7Z5 1873 aa11.35□□□□□ -0.59
DEPDC1-205ENST00000525124 KIF7Q2M1P5 1343 aa11.35□□□□□ -0.59
DEPDC1-205ENST00000525124 BCORQ6W2J9 1755 aa11.34□□□□□ -0.59
DEPDC1-205ENST00000525124 COL3A1P02461 1466 aaPredicted RBP11.34□□□□□ -0.59
DEPDC1-205ENST00000525124 RNMTO43148 476 aaKnown RBP11.34□□□□□ -0.59
DEPDC1-205ENST00000525124 DPEP1P16444 411 aa11.34□□□□□ -0.59
DEPDC1-205ENST00000525124 TM4SF1P30408 202 aa11.34□□□□□ -0.59
DEPDC1-205ENST00000525124 INTS5Q6P9B9 1019 aaKnown RBP11.34□□□□□ -0.59
DEPDC1-205ENST00000525124 VSIG10Q8N0Z9 540 aa11.34□□□□□ -0.59
DEPDC1-205ENST00000525124 IRX2Q9BZI1 471 aaPredicted RBP11.34□□□□□ -0.59
DEPDC1-205ENST00000525124 SOS1Q07889 1333 aaPredicted RBP11.34□□□□□ -0.59
DEPDC1-205ENST00000525124 TIAM2Q8IVF5 1701 aa11.33□□□□□ -0.6
DEPDC1-205ENST00000525124 FCHSD2O94868 740 aa11.33□□□□□ -0.6
DEPDC1-205ENST00000525124 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.6
DEPDC1-205ENST00000525124 PIM2Q9P1W9 311 aa11.33□□□□□ -0.6
DEPDC1-205ENST00000525124 FER1L6Q2WGJ9 1857 aa11.33□□□□□ -0.6
DEPDC1-205ENST00000525124 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
DEPDC1-205ENST00000525124 POLRMTO00411 1230 aaKnown RBP11.32□□□□□ -0.6
DEPDC1-205ENST00000525124 TOMM70O94826 608 aa11.32□□□□□ -0.6
DEPDC1-205ENST00000525124 CYP19A1P11511 503 aaPredicted RBP11.32□□□□□ -0.6
DEPDC1-205ENST00000525124 DDR1Q08345 913 aa11.32□□□□□ -0.6
DEPDC1-205ENST00000525124 ZNF526Q8TF50 670 aaPredicted RBP11.32□□□□□ -0.6
DEPDC1-205ENST00000525124 LGR6Q9HBX8 967 aa11.32□□□□□ -0.6
DEPDC1-205ENST00000525124 SRP68Q9UHB9 627 aaKnown RBP11.32□□□□□ -0.6
DEPDC1-205ENST00000525124 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
DEPDC1-205ENST00000525124 WWC3Q9ULE0 1092 aa11.32□□□□□ -0.6
DEPDC1-205ENST00000525124 COL15A1P39059 1388 aa11.31□□□□□ -0.6
DEPDC1-205ENST00000525124 TRIM6-TRIM34B2RNG4 842 aa11.31□□□□□ -0.6
DEPDC1-205ENST00000525124 DIAPH1O60610 1272 aaKnown RBP11.31□□□□□ -0.6
DEPDC1-205ENST00000525124 ZPR1O75312 459 aa11.31□□□□□ -0.6
DEPDC1-205ENST00000525124 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
DEPDC1-205ENST00000525124 DNAJC10Q8IXB1 793 aa11.31□□□□□ -0.6
DEPDC1-205ENST00000525124 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
DEPDC1-205ENST00000525124 NARFQ9UHQ1 456 aa11.31□□□□□ -0.6
DEPDC1-205ENST00000525124 MTHFSDQ2M296 383 aaKnown RBP11.3□□□□□ -0.6
DEPDC1-205ENST00000525124 DALRD3Q5D0E6 543 aaKnown RBP11.3□□□□□ -0.6
DEPDC1-205ENST00000525124 USPL1Q5W0Q7 1092 aa11.3□□□□□ -0.6
DEPDC1-205ENST00000525124 DDX12PQ92771 950 aa11.3□□□□□ -0.6
DEPDC1-205ENST00000525124 ZC3H4Q9UPT8 1303 aaKnown RBP11.3□□□□□ -0.6
DEPDC1-205ENST00000525124 COL11A2P13942 1736 aaPredicted RBP11.29□□□□□ -0.6
DEPDC1-205ENST00000525124 HMOX1P09601 288 aa11.29□□□□□ -0.6
DEPDC1-205ENST00000525124 APLP1P51693 650 aa11.29□□□□□ -0.6
DEPDC1-205ENST00000525124 DLG5Q8TDM6 1919 aa11.29□□□□□ -0.6
DEPDC1-205ENST00000525124 SLC39A6Q13433 755 aa11.28□□□□□ -0.6
DEPDC1-205ENST00000525124 C9orf131Q5VYM1 1079 aa11.28□□□□□ -0.6
DEPDC1-205ENST00000525124 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
DEPDC1-205ENST00000525124 RBM46Q8TBY0 533 aaKnown RBP11.28□□□□□ -0.6
DEPDC1-205ENST00000525124 TEX13AQ9BXU3 409 aaPredicted RBP11.28□□□□□ -0.6
DEPDC1-205ENST00000525124 ZBTB1Q9Y2K1 713 aa11.28□□□□□ -0.6
DEPDC1-205ENST00000525124 LAMB4A4D0S4 1761 aa11.27□□□□□ -0.61
DEPDC1-205ENST00000525124 EIF5P55010 431 aaKnown RBP11.27□□□□□ -0.61
DEPDC1-205ENST00000525124 NFIXQ14938 502 aa11.27□□□□□ -0.61
DEPDC1-205ENST00000525124 GAS2L2Q8NHY3 880 aa11.27□□□□□ -0.61
DEPDC1-205ENST00000525124 PDZRN3Q9UPQ7 1066 aa11.27□□□□□ -0.61
DEPDC1-205ENST00000525124 KDM2BQ8NHM5 1336 aa11.27□□□□□ -0.61
DEPDC1-205ENST00000525124 CEMIPQ8WUJ3 1361 aa11.27□□□□□ -0.61
DEPDC1-205ENST00000525124 HEG1Q9ULI3 1381 aa11.27□□□□□ -0.61
DEPDC1-205ENST00000525124 A0A087WZG4 1122 aa11.26□□□□□ -0.61
DEPDC1-205ENST00000525124 GNAT3A8MTJ3 354 aa11.26□□□□□ -0.61
DEPDC1-205ENST00000525124 STARD3NLO95772 234 aa11.26□□□□□ -0.61
DEPDC1-205ENST00000525124 CHRNA5P30532 468 aa11.26□□□□□ -0.61
DEPDC1-205ENST00000525124 FSTL1Q12841 308 aa11.26□□□□□ -0.61
DEPDC1-205ENST00000525124 NMRK2Q9NPI5 230 aa11.26□□□□□ -0.61
DEPDC1-205ENST00000525124 SERPINB2P05120 415 aa11.25□□□□□ -0.61
DEPDC1-205ENST00000525124 CC2D1BQ5T0F9 858 aaKnown RBP11.25□□□□□ -0.61
DEPDC1-205ENST00000525124 ZNF790Q6PG37 636 aa11.25□□□□□ -0.61
DEPDC1-205ENST00000525124 TTC5Q8N0Z6 440 aa11.25□□□□□ -0.61
DEPDC1-205ENST00000525124 DNAJC5GQ8N7S2 189 aa11.25□□□□□ -0.61
DEPDC1-205ENST00000525124 SLX4Q8IY92 1834 aa11.24□□□□□ -0.61
DEPDC1-205ENST00000525124 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
DEPDC1-205ENST00000525124 TEFQ10587 303 aa11.24□□□□□ -0.61
DEPDC1-205ENST00000525124 IL17REQ8NFR9 667 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms