RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 ATF3P18847 181 aa21.66■■□□□ 1.06
PCDHB18P-201ENST00000524813 LIG1P18858 919 aa21.66■■□□□ 1.06
PCDHB18P-201ENST00000524813 TYRO3Q06418 890 aa21.66■■□□□ 1.06
PCDHB18P-201ENST00000524813 LUZP1Q86V48 1076 aa21.66■■□□□ 1.06
PCDHB18P-201ENST00000524813 TTC41PQ6P2S7 1318 aa21.66■■□□□ 1.06
PCDHB18P-201ENST00000524813 USP42Q9H9J4 1324 aaKnown RBP21.66■■□□□ 1.06
PCDHB18P-201ENST00000524813 KRT85P78386 507 aa21.66■■□□□ 1.06
PCDHB18P-201ENST00000524813 ZNF335Q9H4Z2 1342 aaPredicted RBP21.66■■□□□ 1.06
PCDHB18P-201ENST00000524813 U2AF2P26368 475 aaKnown RBP eCLIP21.65■■□□□ 1.06
PCDHB18P-201ENST00000524813 LARP1BQ659C4 914 aaKnown RBP21.65■■□□□ 1.06
PCDHB18P-201ENST00000524813 USP54Q70EL1 1684 aa21.65■■□□□ 1.06
PCDHB18P-201ENST00000524813 OS9Q13438 667 aaPredicted RBP21.65■■□□□ 1.06
PCDHB18P-201ENST00000524813 HSP90AB4PQ58FF6 505 aa21.65■■□□□ 1.06
PCDHB18P-201ENST00000524813 FERMT3Q86UX7 667 aa21.65■■□□□ 1.06
PCDHB18P-201ENST00000524813 KCNB2Q92953 911 aa21.65■■□□□ 1.06
PCDHB18P-201ENST00000524813 KIF1AQ12756 1690 aa21.64■■□□□ 1.06
PCDHB18P-201ENST00000524813 CRYBG1Q9Y4K1 1723 aa21.64■■□□□ 1.05
PCDHB18P-201ENST00000524813 TPCN1Q9ULQ1 816 aa21.64■■□□□ 1.05
PCDHB18P-201ENST00000524813 MST1RQ04912 1400 aa21.64■■□□□ 1.05
PCDHB18P-201ENST00000524813 FAM173BQ6P4H8 233 aa21.63■■□□□ 1.05
PCDHB18P-201ENST00000524813 CDC37L1Q7L3B6 337 aa21.63■■□□□ 1.05
PCDHB18P-201ENST00000524813 CCDC186Q7Z3E2 898 aa21.63■■□□□ 1.05
PCDHB18P-201ENST00000524813 CKAP2LQ8IYA6 745 aa21.63■■□□□ 1.05
PCDHB18P-201ENST00000524813 BABAM1Q9NWV8 329 aa21.63■■□□□ 1.05
PCDHB18P-201ENST00000524813 EIF2S2P20042 333 aaKnown RBP21.62■■□□□ 1.05
PCDHB18P-201ENST00000524813 NECTIN1Q15223 517 aa21.62■■□□□ 1.05
PCDHB18P-201ENST00000524813 ELP1O95163 1332 aa21.62■■□□□ 1.05
PCDHB18P-201ENST00000524813 ZKSCAN1P17029 563 aaPredicted RBP21.62■■□□□ 1.05
PCDHB18P-201ENST00000524813 LRMPQ12912 555 aa21.62■■□□□ 1.05
PCDHB18P-201ENST00000524813 DRC7Q8IY82 874 aa21.62■■□□□ 1.05
PCDHB18P-201ENST00000524813 TNMDQ9H2S6 317 aa21.62■■□□□ 1.05
PCDHB18P-201ENST00000524813 CBX8Q9HC52 389 aa21.62■■□□□ 1.05
PCDHB18P-201ENST00000524813 ANO6Q4KMQ2 910 aa21.61■■□□□ 1.05
PCDHB18P-201ENST00000524813 BEND3Q5T5X7 828 aa21.61■■□□□ 1.05
PCDHB18P-201ENST00000524813 LMOD2Q6P5Q4 547 aa21.61■■□□□ 1.05
PCDHB18P-201ENST00000524813 CLASRPQ8N2M8 674 aaKnown RBP21.61■■□□□ 1.05
PCDHB18P-201ENST00000524813 DACT1Q9NYF0 836 aa21.61■■□□□ 1.05
PCDHB18P-201ENST00000524813 NRBP1Q9UHY1 535 aa21.61■■□□□ 1.05
PCDHB18P-201ENST00000524813 LTN1O94822 1766 aa21.61■■□□□ 1.05
PCDHB18P-201ENST00000524813 CCDC171Q6TFL3 1326 aa21.6■■□□□ 1.05
PCDHB18P-201ENST00000524813 ECHDC1Q9NTX5 307 aa21.6■■□□□ 1.05
PCDHB18P-201ENST00000524813 RBM8AQ9Y5S9 174 aaKnown RBP21.6■■□□□ 1.05
PCDHB18P-201ENST00000524813 DCCP43146 1447 aa21.6■■□□□ 1.05
PCDHB18P-201ENST00000524813 CREB3L3Q68CJ9 461 aa21.6■■□□□ 1.05
PCDHB18P-201ENST00000524813 DNAAF4Q8WXU2 420 aa21.6■■□□□ 1.05
PCDHB18P-201ENST00000524813 C16orf45Q96MC5 204 aaPredicted RBP21.6■■□□□ 1.05
PCDHB18P-201ENST00000524813 TRPM3Q9HCF6 1732 aaPredicted RBP21.59■■□□□ 1.05
PCDHB18P-201ENST00000524813 NCBP1Q09161 790 aaKnown RBP21.59■■□□□ 1.05
PCDHB18P-201ENST00000524813 PI4KAP2A4QPH2 592 aa21.59■■□□□ 1.05
PCDHB18P-201ENST00000524813 GOLGA6L4A6NEF3 574 aa21.59■■□□□ 1.05
PCDHB18P-201ENST00000524813 KCNJ4P48050 445 aa21.59■■□□□ 1.05
PCDHB18P-201ENST00000524813 PI4KAP1Q8N8J0 262 aa21.59■■□□□ 1.05
PCDHB18P-201ENST00000524813 DDX17Q92841 729 aaKnown RBP21.59■■□□□ 1.05
PCDHB18P-201ENST00000524813 TRIM5Q9C035 493 aa21.59■■□□□ 1.05
PCDHB18P-201ENST00000524813 PDCP20941 246 aa21.58■■□□□ 1.05
PCDHB18P-201ENST00000524813 ZNF75DP51815 510 aa21.58■■□□□ 1.05
PCDHB18P-201ENST00000524813 KIF20AO95235 890 aa21.58■■□□□ 1.04
PCDHB18P-201ENST00000524813 PDIA4P13667 645 aaKnown RBP21.58■■□□□ 1.04
PCDHB18P-201ENST00000524813 COL9A3Q14050 684 aaPredicted RBP21.58■■□□□ 1.04
PCDHB18P-201ENST00000524813 ZSCAN25Q6NSZ9 544 aa21.58■■□□□ 1.04
PCDHB18P-201ENST00000524813 PLA2G4DQ86XP0 818 aa21.58■■□□□ 1.04
PCDHB18P-201ENST00000524813 CHPF2Q9P2E5 772 aa21.58■■□□□ 1.04
PCDHB18P-201ENST00000524813 TFIP11Q9UBB9 837 aaKnown RBP21.58■■□□□ 1.04
PCDHB18P-201ENST00000524813 SMTNL1A8MU46 457 aa21.57■■□□□ 1.04
PCDHB18P-201ENST00000524813 CADPS2Q86UW7 1296 aa21.57■■□□□ 1.04
PCDHB18P-201ENST00000524813 EVI5LQ96CN4 794 aa21.57■■□□□ 1.04
PCDHB18P-201ENST00000524813 GPATCH3Q96I76 525 aa21.57■■□□□ 1.04
PCDHB18P-201ENST00000524813 SPATA32Q96LK8 384 aa21.57■■□□□ 1.04
PCDHB18P-201ENST00000524813 SCAND2PQ9GZW5 306 aaPredicted RBP21.57■■□□□ 1.04
PCDHB18P-201ENST00000524813 IFIT2P09913 472 aaKnown RBP21.56■■□□□ 1.04
PCDHB18P-201ENST00000524813 FEZ1Q99689 392 aa21.56■■□□□ 1.04
PCDHB18P-201ENST00000524813 TNNT1P13805 278 aa21.56■■□□□ 1.04
PCDHB18P-201ENST00000524813 KRT28Q7Z3Y7 464 aa21.56■■□□□ 1.04
PCDHB18P-201ENST00000524813 FAM227BQ96M60 508 aa21.56■■□□□ 1.04
PCDHB18P-201ENST00000524813 CLSTN2Q9H4D0 955 aa21.56■■□□□ 1.04
PCDHB18P-201ENST00000524813 DDX19AQ9NUU7 478 aaKnown RBP21.56■■□□□ 1.04
PCDHB18P-201ENST00000524813 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 TDRD7Q8NHU6 1098 aaKnown RBP21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 MAP4K1Q92918 833 aa21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 LTV1Q96GA3 475 aaPredicted RBP21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 TCEANC2Q96MN5 208 aa21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 SLC27A2O14975 620 aa21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 PSMA5P28066 241 aa21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 HOXC9P31274 260 aa21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 SYCP1Q15431 976 aa21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 RBM43Q6ZSC3 357 aaKnown RBP21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 LEO1Q8WVC0 666 aaPredicted RBP21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 NPHP3Q7Z494 1330 aa21.55■■□□□ 1.04
PCDHB18P-201ENST00000524813 LARP1Q6PKG0 1096 aaKnown RBP21.54■■□□□ 1.04
PCDHB18P-201ENST00000524813 PA2G4Q9UQ80 394 aaKnown RBP21.54■■□□□ 1.04
PCDHB18P-201ENST00000524813 NMIQ13287 307 aaPredicted RBP21.54■■□□□ 1.04
PCDHB18P-201ENST00000524813 OGFRQ9NZT2 677 aa21.54■■□□□ 1.04
PCDHB18P-201ENST00000524813 NFAT5O94916 1531 aa21.54■■□□□ 1.04
PCDHB18P-201ENST00000524813 ANXA1P04083 346 aa21.53■■□□□ 1.04
PCDHB18P-201ENST00000524813 EIF4A1P60842 406 aaKnown RBP21.53■■□□□ 1.04
PCDHB18P-201ENST00000524813 MTX1Q13505 466 aa21.53■■□□□ 1.04
PCDHB18P-201ENST00000524813 AACSQ86V21 672 aa21.53■■□□□ 1.04
PCDHB18P-201ENST00000524813 NR1I2O75469 434 aa21.53■■□□□ 1.04
PCDHB18P-201ENST00000524813 ZNF165P49910 485 aa21.53■■□□□ 1.04
PCDHB18P-201ENST00000524813 BLOC1S2Q6QNY1 142 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms