RNA–Protein interactions for RNA: ENST00000524520.5

SOX6-203, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-203ENST00000524520 RBM17Q96I25 401 aaKnown RBP18.47■□□□□ 0.55
SOX6-203ENST00000524520 DDX21Q9NR30 783 aaKnown RBP eCLIP18.47■□□□□ 0.55
SOX6-203ENST00000524520 TRIM35Q9UPQ4 493 aa18.47■□□□□ 0.55
SOX6-203ENST00000524520 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
SOX6-203ENST00000524520 DDNO94850 711 aaPredicted RBP18.46■□□□□ 0.55
SOX6-203ENST00000524520 NTSR2O95665 410 aa18.46■□□□□ 0.55
SOX6-203ENST00000524520 CCDC146Q8IYE0 955 aa18.46■□□□□ 0.55
SOX6-203ENST00000524520 L3MBTL3Q96JM7 780 aaPredicted RBP18.46■□□□□ 0.55
SOX6-203ENST00000524520 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
SOX6-203ENST00000524520 IARSP41252 1262 aaKnown RBP18.45■□□□□ 0.54
SOX6-203ENST00000524520 COPS6Q7L5N1 327 aa18.45■□□□□ 0.54
SOX6-203ENST00000524520 SYNE4Q8N205 404 aa18.45■□□□□ 0.54
SOX6-203ENST00000524520 CFAP44Q96MT7 982 aa18.45■□□□□ 0.54
SOX6-203ENST00000524520 TMX4Q9H1E5 349 aaPredicted RBP18.45■□□□□ 0.54
SOX6-203ENST00000524520 ABCC12Q96J65 1359 aa18.44■□□□□ 0.54
SOX6-203ENST00000524520 JMYQ8N9B5 988 aa18.44■□□□□ 0.54
SOX6-203ENST00000524520 JDP2Q8WYK2 163 aa18.44■□□□□ 0.54
SOX6-203ENST00000524520 VPS33BQ9H267 617 aa18.44■□□□□ 0.54
SOX6-203ENST00000524520 FZD9O00144 591 aa18.43■□□□□ 0.54
SOX6-203ENST00000524520 CALD1Q05682 793 aaKnown RBP18.43■□□□□ 0.54
SOX6-203ENST00000524520 TCIRG1Q13488 830 aa18.43■□□□□ 0.54
SOX6-203ENST00000524520 CHADLQ6NUI6 762 aa18.43■□□□□ 0.54
SOX6-203ENST00000524520 CHMP4AQ9BY43 222 aa18.43■□□□□ 0.54
SOX6-203ENST00000524520 ZNF277Q9NRM2 450 aaPredicted RBP18.43■□□□□ 0.54
SOX6-203ENST00000524520 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
SOX6-203ENST00000524520 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
SOX6-203ENST00000524520 ANKRD36CQ5JPF3 1778 aa18.42■□□□□ 0.54
SOX6-203ENST00000524520 PROSER3Q2NL68 480 aa18.42■□□□□ 0.54
SOX6-203ENST00000524520 XAGE3Q8WTP9 111 aa18.42■□□□□ 0.54
SOX6-203ENST00000524520 BBOX1O75936 387 aa18.41■□□□□ 0.54
SOX6-203ENST00000524520 AIMP1Q12904 312 aaKnown RBP18.41■□□□□ 0.54
SOX6-203ENST00000524520 IFFO2Q5TF58 517 aa18.41■□□□□ 0.54
SOX6-203ENST00000524520 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
SOX6-203ENST00000524520 ANXA1P04083 346 aa18.4■□□□□ 0.54
SOX6-203ENST00000524520 HDGFL1Q5TGJ6 251 aa18.4■□□□□ 0.54
SOX6-203ENST00000524520 OLFM4Q6UX06 510 aa18.4■□□□□ 0.54
SOX6-203ENST00000524520 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
SOX6-203ENST00000524520 NLRP10Q86W26 655 aa18.4■□□□□ 0.54
SOX6-203ENST00000524520 LDHDQ86WU2 507 aa18.4■□□□□ 0.54
SOX6-203ENST00000524520 GPC2Q8N158 579 aa18.4■□□□□ 0.54
SOX6-203ENST00000524520 TAF1DQ9H5J8 278 aaPredicted RBP18.4■□□□□ 0.54
SOX6-203ENST00000524520 HYPKQ9NX55 129 aa18.4■□□□□ 0.54
SOX6-203ENST00000524520 HACL1Q9UJ83 578 aa18.4■□□□□ 0.54
SOX6-203ENST00000524520 PPEF1O14829 653 aaPredicted RBP18.39■□□□□ 0.53
SOX6-203ENST00000524520 EIF6P56537 245 aaKnown RBP18.39■□□□□ 0.53
SOX6-203ENST00000524520 GNAI1P63096 354 aa18.39■□□□□ 0.53
SOX6-203ENST00000524520 ANKRD13DQ6ZTN6 518 aa18.39■□□□□ 0.53
SOX6-203ENST00000524520 PLBD2Q8NHP8 589 aa18.39■□□□□ 0.53
SOX6-203ENST00000524520 NECTIN2Q92692 538 aa18.39■□□□□ 0.53
SOX6-203ENST00000524520 TRMT112Q9UI30 125 aaKnown RBP18.39■□□□□ 0.53
SOX6-203ENST00000524520 HTRA3P83110 453 aa18.38■□□□□ 0.53
SOX6-203ENST00000524520 SUPT20HQ8NEM7 779 aa18.38■□□□□ 0.53
SOX6-203ENST00000524520 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
SOX6-203ENST00000524520 ATP6V0A2Q9Y487 856 aa18.38■□□□□ 0.53
SOX6-203ENST00000524520 SH3TC1Q8TE82 1336 aa18.38■□□□□ 0.53
SOX6-203ENST00000524520 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
SOX6-203ENST00000524520 KRT24Q2M2I5 525 aa18.37■□□□□ 0.53
SOX6-203ENST00000524520 DUSP27Q5VZP5 1158 aa18.37■□□□□ 0.53
SOX6-203ENST00000524520 TMC4Q7Z404 712 aa18.37■□□□□ 0.53
SOX6-203ENST00000524520 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
SOX6-203ENST00000524520 APAF1O14727 1248 aa18.36■□□□□ 0.53
SOX6-203ENST00000524520 TRIM28Q13263 835 aaKnown RBP18.36■□□□□ 0.53
SOX6-203ENST00000524520 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
SOX6-203ENST00000524520 SP8Q8IXZ3 490 aa18.36■□□□□ 0.53
SOX6-203ENST00000524520 LARGE2Q8N3Y3 721 aa18.36■□□□□ 0.53
SOX6-203ENST00000524520 ZNF541Q9H0D2 1346 aa18.36■□□□□ 0.53
SOX6-203ENST00000524520 CREBZFQ9NS37 354 aa18.36■□□□□ 0.53
SOX6-203ENST00000524520 EPHX2P34913 555 aa18.35■□□□□ 0.53
SOX6-203ENST00000524520 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
SOX6-203ENST00000524520 MBIPQ9NS73 344 aa18.35■□□□□ 0.53
SOX6-203ENST00000524520 HSP90B1P14625 803 aaKnown RBP18.34■□□□□ 0.53
SOX6-203ENST00000524520 C3orf67Q6ZVT6 689 aa18.34■□□□□ 0.53
SOX6-203ENST00000524520 ISCA1Q9BUE6 129 aa18.34■□□□□ 0.53
SOX6-203ENST00000524520 RTFDC1Q9BY42 306 aaPredicted RBP18.34■□□□□ 0.53
SOX6-203ENST00000524520 LAMB2P55268 1798 aa18.34■□□□□ 0.53
SOX6-203ENST00000524520 ABCC4O15439 1325 aa18.33■□□□□ 0.53
SOX6-203ENST00000524520 HCLS1P14317 486 aaPredicted RBP18.33■□□□□ 0.52
SOX6-203ENST00000524520 LMOD1P29536 600 aaPredicted RBP18.33■□□□□ 0.52
SOX6-203ENST00000524520 NIM1KQ8IY84 436 aa18.33■□□□□ 0.52
SOX6-203ENST00000524520 TCERG1O14776 1098 aaKnown RBP18.32■□□□□ 0.52
SOX6-203ENST00000524520 POTEIP0CG38 1075 aa18.32■□□□□ 0.52
SOX6-203ENST00000524520 POTEJP0CG39 1038 aa18.32■□□□□ 0.52
SOX6-203ENST00000524520 GRAPQ13588 217 aa18.32■□□□□ 0.52
SOX6-203ENST00000524520 EAPPQ56P03 285 aaPredicted RBP18.32■□□□□ 0.52
SOX6-203ENST00000524520 MPNDQ8N594 471 aa18.32■□□□□ 0.52
SOX6-203ENST00000524520 GRAPLQ8TC17 118 aaPredicted RBP18.32■□□□□ 0.52
SOX6-203ENST00000524520 CLEC11AQ9Y240 323 aa18.32■□□□□ 0.52
SOX6-203ENST00000524520 PASKQ96RG2 1323 aa18.31■□□□□ 0.52
SOX6-203ENST00000524520 PPIP5K2O43314 1243 aa18.31■□□□□ 0.52
SOX6-203ENST00000524520 ITGBL1O95965 494 aaPredicted RBP18.31■□□□□ 0.52
SOX6-203ENST00000524520 SF3B3Q15393 1217 aaKnown RBP18.31■□□□□ 0.52
SOX6-203ENST00000524520 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
SOX6-203ENST00000524520 DPP8Q6V1X1 898 aaPredicted RBP18.31■□□□□ 0.52
SOX6-203ENST00000524520 PCNTO95613 3336 aa18.31■□□□□ 0.52
SOX6-203ENST00000524520 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
SOX6-203ENST00000524520 RIC3Q7Z5B4 369 aa18.3■□□□□ 0.52
SOX6-203ENST00000524520 ZNRF3Q9ULT6 936 aa18.3■□□□□ 0.52
SOX6-203ENST00000524520 GJA3Q9Y6H8 435 aa18.3■□□□□ 0.52
SOX6-203ENST00000524520 TMEM88BA6NKF7 163 aa18.29■□□□□ 0.52
SOX6-203ENST00000524520 CCDC27Q2M243 656 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms