RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
NECTIN1-204ENST00000524429 SALL2Q9Y467 1007 aaPredicted RBP10.37□□□□□ -0.75
NECTIN1-204ENST00000524429 BHMG1C9JSJ3 638 aaPredicted RBP10.36□□□□□ -0.75
NECTIN1-204ENST00000524429 MRPL50Q8N5N7 158 aaKnown RBP10.36□□□□□ -0.75
NECTIN1-204ENST00000524429 IL17REQ8NFR9 667 aa10.36□□□□□ -0.75
NECTIN1-204ENST00000524429 CDCA7LQ96GN5 454 aa10.36□□□□□ -0.75
NECTIN1-204ENST00000524429 SOS1Q07889 1333 aaPredicted RBP10.35□□□□□ -0.75
NECTIN1-204ENST00000524429 FANCIQ9NVI1 1328 aa10.35□□□□□ -0.75
NECTIN1-204ENST00000524429 N4BP2Q86UW6 1770 aaPredicted RBP10.35□□□□□ -0.75
NECTIN1-204ENST00000524429 A6NJR5 290 aa10.35□□□□□ -0.75
NECTIN1-204ENST00000524429 CHL1O00533 1208 aa10.35□□□□□ -0.75
NECTIN1-204ENST00000524429 KCNQ2O43526 872 aa10.35□□□□□ -0.75
NECTIN1-204ENST00000524429 MCM10Q7L590 875 aa10.35□□□□□ -0.75
NECTIN1-204ENST00000524429 NBPF3Q9H094 633 aa10.35□□□□□ -0.75
NECTIN1-204ENST00000524429 SPON1Q9HCB6 807 aa10.35□□□□□ -0.75
NECTIN1-204ENST00000524429 C5P01031 1676 aa10.34□□□□□ -0.75
NECTIN1-204ENST00000524429 ERVV-2B6SEH9 535 aa10.34□□□□□ -0.75
NECTIN1-204ENST00000524429 RNMTO43148 476 aaKnown RBP10.34□□□□□ -0.75
NECTIN1-204ENST00000524429 C1QTNF8P60827 252 aa10.34□□□□□ -0.75
NECTIN1-204ENST00000524429 NBPF14Q5TI25 921 aa10.34□□□□□ -0.75
NECTIN1-204ENST00000524429 ZNF428Q96B54 188 aa10.34□□□□□ -0.75
NECTIN1-204ENST00000524429 USP35Q9P2H5 1018 aa10.34□□□□□ -0.75
NECTIN1-204ENST00000524429 NUP188Q5SRE5 1749 aa10.33□□□□□ -0.76
NECTIN1-204ENST00000524429 BTAF1O14981 1849 aa10.33□□□□□ -0.76
NECTIN1-204ENST00000524429 EXOC5O00471 708 aa10.33□□□□□ -0.76
NECTIN1-204ENST00000524429 DCTN1Q14203 1278 aa10.33□□□□□ -0.76
NECTIN1-204ENST00000524429 TAF7Q15545 349 aaPredicted RBP10.33□□□□□ -0.76
NECTIN1-204ENST00000524429 DDB1Q16531 1140 aa10.33□□□□□ -0.76
NECTIN1-204ENST00000524429 FAM196AQ6ZSG2 479 aa10.33□□□□□ -0.76
NECTIN1-204ENST00000524429 ZBED2Q9BTP6 218 aa10.33□□□□□ -0.76
NECTIN1-204ENST00000524429 RREB1Q92766 1687 aa10.33□□□□□ -0.76
NECTIN1-204ENST00000524429 UTRNP46939 3433 aa10.32□□□□□ -0.76
NECTIN1-204ENST00000524429 TEFQ10587 303 aa10.32□□□□□ -0.76
NECTIN1-204ENST00000524429 MAP2K5Q13163 448 aa10.32□□□□□ -0.76
NECTIN1-204ENST00000524429 MPRIPQ6WCQ1 1025 aa10.32□□□□□ -0.76
NECTIN1-204ENST00000524429 ZDHHC16Q969W1 377 aa10.32□□□□□ -0.76
NECTIN1-204ENST00000524429 THUMPD2Q9BTF0 503 aaKnown RBP10.32□□□□□ -0.76
NECTIN1-204ENST00000524429 SLC52A2Q9HAB3 445 aa10.32□□□□□ -0.76
NECTIN1-204ENST00000524429 MBIPQ9NS73 344 aa10.32□□□□□ -0.76
NECTIN1-204ENST00000524429 LY75O60449 1722 aa10.32□□□□□ -0.76
NECTIN1-204ENST00000524429 RGPD3A6NKT7 1758 aaPredicted RBP10.31□□□□□ -0.76
NECTIN1-204ENST00000524429 RGPD4Q7Z3J3 1758 aa10.31□□□□□ -0.76
NECTIN1-204ENST00000524429 HEG1Q9ULI3 1381 aa10.31□□□□□ -0.76
NECTIN1-204ENST00000524429 COL5A3P25940 1745 aaPredicted RBP10.31□□□□□ -0.76
NECTIN1-204ENST00000524429 EVI5O60447 810 aa10.31□□□□□ -0.76
NECTIN1-204ENST00000524429 PDIA6Q15084 440 aa10.31□□□□□ -0.76
NECTIN1-204ENST00000524429 AMHR2Q16671 573 aa10.31□□□□□ -0.76
NECTIN1-204ENST00000524429 LGR6Q9HBX8 967 aa10.31□□□□□ -0.76
NECTIN1-204ENST00000524429 KCPQ6ZWJ8 1503 aa10.31□□□□□ -0.76
NECTIN1-204ENST00000524429 RNF123Q5XPI4 1314 aa10.31□□□□□ -0.76
NECTIN1-204ENST00000524429 TRAK2O60296 914 aa10.3□□□□□ -0.76
NECTIN1-204ENST00000524429 HOXB7P09629 217 aa10.3□□□□□ -0.76
NECTIN1-204ENST00000524429 TSR2Q969E8 191 aaKnown RBP10.3□□□□□ -0.76
NECTIN1-204ENST00000524429 ANO8Q9HCE9 1232 aaPredicted RBP10.3□□□□□ -0.76
NECTIN1-204ENST00000524429 TAF1LQ8IZX4 1826 aa10.3□□□□□ -0.76
NECTIN1-204ENST00000524429 TJP1Q07157 1748 aa10.3□□□□□ -0.76
NECTIN1-204ENST00000524429 DPYSL4O14531 572 aa10.29□□□□□ -0.76
NECTIN1-204ENST00000524429 IRF6O14896 467 aa10.29□□□□□ -0.76
NECTIN1-204ENST00000524429 CCDC82Q8N4S0 544 aa10.29□□□□□ -0.76
NECTIN1-204ENST00000524429 CHMP4AQ9BY43 222 aa10.29□□□□□ -0.76
NECTIN1-204ENST00000524429 TSPYL4Q9UJ04 414 aa10.29□□□□□ -0.76
NECTIN1-204ENST00000524429 RCAN3Q9UKA8 241 aa10.29□□□□□ -0.76
NECTIN1-204ENST00000524429 BTBD11A6QL63 1104 aa10.28□□□□□ -0.76
NECTIN1-204ENST00000524429 EXOSC9Q06265 439 aaKnown RBP10.28□□□□□ -0.76
NECTIN1-204ENST00000524429 ALDH1L2Q3SY69 923 aa10.28□□□□□ -0.76
NECTIN1-204ENST00000524429 MARCH10Q8NA82 808 aaPredicted RBP10.28□□□□□ -0.76
NECTIN1-204ENST00000524429 DDX54Q8TDD1 881 aaKnown RBP10.28□□□□□ -0.76
NECTIN1-204ENST00000524429 CCDC102AQ96A19 550 aa10.28□□□□□ -0.76
NECTIN1-204ENST00000524429 PCMTD1Q96MG8 357 aaPredicted RBP10.28□□□□□ -0.76
NECTIN1-204ENST00000524429 CABP4P57796 275 aa10.27□□□□□ -0.77
NECTIN1-204ENST00000524429 MAP3K9P80192 1104 aa10.27□□□□□ -0.77
NECTIN1-204ENST00000524429 ZNF790Q6PG37 636 aa10.27□□□□□ -0.77
NECTIN1-204ENST00000524429 Q6ZNB5 142 aa10.27□□□□□ -0.77
NECTIN1-204ENST00000524429 NFATC2IPQ8NCF5 419 aa10.27□□□□□ -0.77
NECTIN1-204ENST00000524429 ADAM33Q9BZ11 813 aa10.27□□□□□ -0.77
NECTIN1-204ENST00000524429 LAS1LQ9Y4W2 734 aaKnown RBP10.27□□□□□ -0.77
NECTIN1-204ENST00000524429 CEP350Q5VT06 3117 aa10.26□□□□□ -0.77
NECTIN1-204ENST00000524429 GPR37O15354 613 aa10.26□□□□□ -0.77
NECTIN1-204ENST00000524429 EIF4A1P60842 406 aaKnown RBP10.26□□□□□ -0.77
NECTIN1-204ENST00000524429 TWISTNBQ3B726 338 aaPredicted RBP10.26□□□□□ -0.77
NECTIN1-204ENST00000524429 PARP9Q8IXQ6 854 aa10.26□□□□□ -0.77
NECTIN1-204ENST00000524429 KCTD17Q8N5Z5 321 aa10.26□□□□□ -0.77
NECTIN1-204ENST00000524429 PDGFDQ9GZP0 370 aaPredicted RBP10.26□□□□□ -0.77
NECTIN1-204ENST00000524429 TMOD3Q9NYL9 352 aa10.26□□□□□ -0.77
NECTIN1-204ENST00000524429 VAMP4O75379 141 aa10.25□□□□□ -0.77
NECTIN1-204ENST00000524429 RARSP54136 660 aaKnown RBP10.25□□□□□ -0.77
NECTIN1-204ENST00000524429 C8orf58Q8NAV2 365 aa10.25□□□□□ -0.77
NECTIN1-204ENST00000524429 PPP1R3GB7ZBB8 358 aa10.24□□□□□ -0.77
NECTIN1-204ENST00000524429 ZBTB7AO95365 584 aa10.24□□□□□ -0.77
NECTIN1-204ENST00000524429 TTC5Q8N0Z6 440 aa10.24□□□□□ -0.77
NECTIN1-204ENST00000524429 ANKK1Q8NFD2 765 aa10.24□□□□□ -0.77
NECTIN1-204ENST00000524429 MYH14Q7Z406 1995 aaKnown RBP10.24□□□□□ -0.77
NECTIN1-204ENST00000524429 KIF16BQ96L93 1317 aa10.24□□□□□ -0.77
NECTIN1-204ENST00000524429 GIGYF1O75420 1035 aaPredicted RBP10.23□□□□□ -0.77
NECTIN1-204ENST00000524429 TTLL12Q14166 644 aaPredicted RBP10.23□□□□□ -0.77
NECTIN1-204ENST00000524429 TSPYL6Q8N831 410 aa10.23□□□□□ -0.77
NECTIN1-204ENST00000524429 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.23□□□□□ -0.77
NECTIN1-204ENST00000524429 PIGBQ92521 554 aa10.23□□□□□ -0.77
NECTIN1-204ENST00000524429 FMNL2Q96PY5 1086 aa10.23□□□□□ -0.77
NECTIN1-204ENST00000524429 MIS18AQ9NYP9 233 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms