RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 ZKSCAN2Q63HK3 967 aa23.72■■□□□ 1.39
LMO1-203ENST00000524379 SLC4A10Q6U841 1118 aa23.72■■□□□ 1.39
LMO1-203ENST00000524379 NLGN2Q8NFZ4 835 aa23.72■■□□□ 1.39
LMO1-203ENST00000524379 FAM177BA6PVY3 158 aa23.71■■□□□ 1.39
LMO1-203ENST00000524379 LINS1Q8NG48 757 aa23.71■■□□□ 1.39
LMO1-203ENST00000524379 ABCC12Q96J65 1359 aa23.7■■□□□ 1.38
LMO1-203ENST00000524379 IBTKQ9P2D0 1353 aaPredicted RBP23.7■■□□□ 1.38
LMO1-203ENST00000524379 IPO8O15397 1037 aaKnown RBP23.7■■□□□ 1.38
LMO1-203ENST00000524379 PRR5LQ6MZQ0 368 aa23.7■■□□□ 1.38
LMO1-203ENST00000524379 SYNE4Q8N205 404 aa23.7■■□□□ 1.38
LMO1-203ENST00000524379 CCDC24Q8N4L8 307 aa23.7■■□□□ 1.38
LMO1-203ENST00000524379 CLUAP1Q96AJ1 413 aa23.7■■□□□ 1.38
LMO1-203ENST00000524379 CHD4Q14839 1912 aa23.69■■□□□ 1.38
LMO1-203ENST00000524379 PARP10Q53GL7 1025 aa23.69■■□□□ 1.38
LMO1-203ENST00000524379 C20orf194Q5TEA3 1177 aa23.69■■□□□ 1.38
LMO1-203ENST00000524379 PARP3Q9Y6F1 533 aa23.69■■□□□ 1.38
LMO1-203ENST00000524379 NUTM1Q86Y26 1132 aa23.68■■□□□ 1.38
LMO1-203ENST00000524379 CCDC191Q8NCU4 936 aa23.68■■□□□ 1.38
LMO1-203ENST00000524379 JARID2Q92833 1246 aaPredicted RBP23.68■■□□□ 1.38
LMO1-203ENST00000524379 CWC25Q9NXE8 425 aaPredicted RBP23.68■■□□□ 1.38
LMO1-203ENST00000524379 C10orf71Q711Q0 1435 aa23.67■■□□□ 1.38
LMO1-203ENST00000524379 RNF123Q5XPI4 1314 aa23.67■■□□□ 1.38
LMO1-203ENST00000524379 RRP1P56182 461 aaKnown RBP23.67■■□□□ 1.38
LMO1-203ENST00000524379 NEXNQ0ZGT2 675 aa23.67■■□□□ 1.38
LMO1-203ENST00000524379 GCKRQ14397 625 aa23.67■■□□□ 1.38
LMO1-203ENST00000524379 NBPF5PQ86XG9 351 aaPredicted RBP23.67■■□□□ 1.38
LMO1-203ENST00000524379 PANK1Q8TE04 598 aa23.67■■□□□ 1.38
LMO1-203ENST00000524379 SRCIN1Q9C0H9 1055 aa23.67■■□□□ 1.38
LMO1-203ENST00000524379 TNRC6CQ9HCJ0 1690 aaKnown RBP23.67■■□□□ 1.38
LMO1-203ENST00000524379 ALDH1L1O75891 902 aa23.66■■□□□ 1.38
LMO1-203ENST00000524379 CASP7P55210 303 aa23.66■■□□□ 1.38
LMO1-203ENST00000524379 ERFEQ4G0M1 354 aa23.66■■□□□ 1.38
LMO1-203ENST00000524379 INTS3Q68E01 1043 aaKnown RBP23.66■■□□□ 1.38
LMO1-203ENST00000524379 TMEM57Q8N5G2 664 aa23.66■■□□□ 1.38
LMO1-203ENST00000524379 UTP14AQ9BVJ6 771 aaKnown RBP23.66■■□□□ 1.38
LMO1-203ENST00000524379 ANKRD31Q8N7Z5 1873 aa23.66■■□□□ 1.38
LMO1-203ENST00000524379 DZIP1LQ8IYY4 767 aaKnown RBP23.65■■□□□ 1.38
LMO1-203ENST00000524379 CNBD1Q8NA66 436 aa23.65■■□□□ 1.38
LMO1-203ENST00000524379 FAM89AQ96GI7 184 aa23.65■■□□□ 1.38
LMO1-203ENST00000524379 GOLGB1Q14789 3259 aaKnown RBP23.65■■□□□ 1.38
LMO1-203ENST00000524379 H7C1W4 665 aa23.64■■□□□ 1.37
LMO1-203ENST00000524379 GRIN3BO60391 1043 aa23.64■■□□□ 1.37
LMO1-203ENST00000524379 C3orf67Q6ZVT6 689 aa23.64■■□□□ 1.37
LMO1-203ENST00000524379 PPP1R42Q7Z4L9 355 aa23.64■■□□□ 1.37
LMO1-203ENST00000524379 TRMT112Q9UI30 125 aaKnown RBP23.64■■□□□ 1.37
LMO1-203ENST00000524379 CD2APQ9Y5K6 639 aa23.64■■□□□ 1.37
LMO1-203ENST00000524379 CCT4P50991 539 aaKnown RBP23.63■■□□□ 1.37
LMO1-203ENST00000524379 RTL5Q5HYW3 569 aaPredicted RBP23.63■■□□□ 1.37
LMO1-203ENST00000524379 TPTE2Q6XPS3 522 aa23.63■■□□□ 1.37
LMO1-203ENST00000524379 DDX60Q8IY21 1712 aaKnown RBP23.63■■□□□ 1.37
LMO1-203ENST00000524379 KIAA1551Q9HCM1 1747 aa23.63■■□□□ 1.37
LMO1-203ENST00000524379 KIF13BQ9NQT8 1826 aa23.63■■□□□ 1.37
LMO1-203ENST00000524379 PCCAP05165 728 aaPredicted RBP23.62■■□□□ 1.37
LMO1-203ENST00000524379 ZBTB38Q8NAP3 1195 aaPredicted RBP23.62■■□□□ 1.37
LMO1-203ENST00000524379 NYXQ9GZU5 481 aa23.62■■□□□ 1.37
LMO1-203ENST00000524379 SH3TC1Q8TE82 1336 aa23.61■■□□□ 1.37
LMO1-203ENST00000524379 USP44Q9H0E7 712 aa23.61■■□□□ 1.37
LMO1-203ENST00000524379 SUPT16HQ9Y5B9 1047 aaKnown RBP23.61■■□□□ 1.37
LMO1-203ENST00000524379 UTYO14607 1347 aa23.6■■□□□ 1.37
LMO1-203ENST00000524379 RIC1Q4ADV7 1423 aa23.6■■□□□ 1.37
LMO1-203ENST00000524379 GRM8O00222 908 aa23.6■■□□□ 1.37
LMO1-203ENST00000524379 NBPF7P0C2Y1 421 aaPredicted RBP23.6■■□□□ 1.37
LMO1-203ENST00000524379 HCLS1P14317 486 aaPredicted RBP23.6■■□□□ 1.37
LMO1-203ENST00000524379 YBX3P16989 372 aaKnown RBP eCLIP23.6■■□□□ 1.37
LMO1-203ENST00000524379 SLC10A5Q5PT55 438 aa23.6■■□□□ 1.37
LMO1-203ENST00000524379 UBE3BQ7Z3V4 1068 aa23.6■■□□□ 1.37
LMO1-203ENST00000524379 LAMB2P55268 1798 aa23.6■■□□□ 1.37
LMO1-203ENST00000524379 FTSJ3Q8IY81 847 aaKnown RBP23.59■■□□□ 1.37
LMO1-203ENST00000524379 COL11A2P13942 1736 aaPredicted RBP23.59■■□□□ 1.37
LMO1-203ENST00000524379 KAZALD1Q96I82 304 aa23.58■■□□□ 1.37
LMO1-203ENST00000524379 MEIS3Q99687 375 aa23.58■■□□□ 1.37
LMO1-203ENST00000524379 CDHR2Q9BYE9 1310 aa23.58■■□□□ 1.36
LMO1-203ENST00000524379 IRS4O14654 1257 aaPredicted RBP23.57■■□□□ 1.36
LMO1-203ENST00000524379 ST5P78524 1137 aa23.57■■□□□ 1.36
LMO1-203ENST00000524379 PDE3AQ14432 1141 aa23.57■■□□□ 1.36
LMO1-203ENST00000524379 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.57■■□□□ 1.36
LMO1-203ENST00000524379 BRIP1Q9BX63 1249 aa23.57■■□□□ 1.36
LMO1-203ENST00000524379 KLRG2A4D1S0 409 aaPredicted RBP23.56■■□□□ 1.36
LMO1-203ENST00000524379 EPHA10Q5JZY3 1008 aa23.56■■□□□ 1.36
LMO1-203ENST00000524379 COG6Q9Y2V7 657 aa23.56■■□□□ 1.36
LMO1-203ENST00000524379 GTF2E1P29083 439 aaPredicted RBP23.55■■□□□ 1.36
LMO1-203ENST00000524379 SUCLG2Q96I99 432 aa23.55■■□□□ 1.36
LMO1-203ENST00000524379 C9orf78Q9NZ63 289 aaPredicted RBP23.55■■□□□ 1.36
LMO1-203ENST00000524379 COL4A1P02462 1669 aa23.54■■□□□ 1.36
LMO1-203ENST00000524379 NPHP1O15259 732 aa23.54■■□□□ 1.36
LMO1-203ENST00000524379 ITPRIPQ8IWB1 547 aa23.54■■□□□ 1.36
LMO1-203ENST00000524379 ZBTB7BO15156 539 aaPredicted RBP23.53■■□□□ 1.36
LMO1-203ENST00000524379 MS4A1P11836 297 aa23.53■■□□□ 1.36
LMO1-203ENST00000524379 CHRNA5P30532 468 aa23.53■■□□□ 1.36
LMO1-203ENST00000524379 FOXO4P98177 505 aa23.53■■□□□ 1.36
LMO1-203ENST00000524379 MVPQ14764 893 aaKnown RBP23.53■■□□□ 1.36
LMO1-203ENST00000524379 PLA2G12BQ9BX93 195 aa23.53■■□□□ 1.36
LMO1-203ENST00000524379 KCNA3P22001 575 aa23.52■■□□□ 1.36
LMO1-203ENST00000524379 CRY2Q49AN0 593 aa23.52■■□□□ 1.36
LMO1-203ENST00000524379 DPEP1P16444 411 aa23.51■■□□□ 1.35
LMO1-203ENST00000524379 DLEC1Q9Y238 1755 aa23.5■■□□□ 1.35
LMO1-203ENST00000524379 A0A0G2JLW4 131 aa23.5■■□□□ 1.35
LMO1-203ENST00000524379 PDE8AO60658 829 aa23.5■■□□□ 1.35
LMO1-203ENST00000524379 C1QTNF8P60827 252 aa23.5■■□□□ 1.35
LMO1-203ENST00000524379 SF3B3Q15393 1217 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms