RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 PI4KAP1Q8N8J0 262 aa15.36■□□□□ 0.05
CLN8-207ENST00000524258 UTP14AQ9BVJ6 771 aaKnown RBP15.36■□□□□ 0.05
CLN8-207ENST00000524258 BCS1LQ9Y276 419 aa15.36■□□□□ 0.05
CLN8-207ENST00000524258 COL11A2P13942 1736 aaPredicted RBP15.36■□□□□ 0.05
CLN8-207ENST00000524258 ANKRD36CQ5JPF3 1778 aa15.35■□□□□ 0.05
CLN8-207ENST00000524258 DLEC1Q9Y238 1755 aa15.35■□□□□ 0.05
CLN8-207ENST00000524258 DALRD3Q5D0E6 543 aaKnown RBP15.35■□□□□ 0.05
CLN8-207ENST00000524258 PPP1R42Q7Z4L9 355 aa15.35■□□□□ 0.05
CLN8-207ENST00000524258 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
CLN8-207ENST00000524258 C7orf43Q8WVR3 580 aa15.35■□□□□ 0.05
CLN8-207ENST00000524258 MAP3K2Q9Y2U5 619 aa15.35■□□□□ 0.05
CLN8-207ENST00000524258 RNF123Q5XPI4 1314 aa15.35■□□□□ 0.05
CLN8-207ENST00000524258 TNRC6CQ9HCJ0 1690 aaKnown RBP15.35■□□□□ 0.05
CLN8-207ENST00000524258 ARFGEF2Q9Y6D5 1785 aa15.34■□□□□ 0.05
CLN8-207ENST00000524258 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
CLN8-207ENST00000524258 STYK1Q6J9G0 422 aa15.34■□□□□ 0.05
CLN8-207ENST00000524258 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
CLN8-207ENST00000524258 TTLL6Q8N841 843 aa15.34■□□□□ 0.05
CLN8-207ENST00000524258 MYD88Q99836 296 aa15.34■□□□□ 0.05
CLN8-207ENST00000524258 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
CLN8-207ENST00000524258 DDX58O95786 925 aaKnown RBP15.33■□□□□ 0.04
CLN8-207ENST00000524258 HOXA10P31260 410 aaPredicted RBP15.33■□□□□ 0.04
CLN8-207ENST00000524258 SSH1Q8WYL5 1049 aa15.33■□□□□ 0.04
CLN8-207ENST00000524258 ZNF428Q96B54 188 aa15.33■□□□□ 0.04
CLN8-207ENST00000524258 MASTLQ96GX5 879 aa15.33■□□□□ 0.04
CLN8-207ENST00000524258 HCLS1P14317 486 aaPredicted RBP15.32■□□□□ 0.04
CLN8-207ENST00000524258 NPR1P16066 1061 aa15.32■□□□□ 0.04
CLN8-207ENST00000524258 CCDC191Q8NCU4 936 aa15.32■□□□□ 0.04
CLN8-207ENST00000524258 FAM89AQ96GI7 184 aa15.32■□□□□ 0.04
CLN8-207ENST00000524258 TRMT112Q9UI30 125 aaKnown RBP15.32■□□□□ 0.04
CLN8-207ENST00000524258 CACNA1FO60840 1977 aa15.31■□□□□ 0.04
CLN8-207ENST00000524258 CT47B1P0C2W7 299 aaPredicted RBP15.31■□□□□ 0.04
CLN8-207ENST00000524258 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
CLN8-207ENST00000524258 ZNF622Q969S3 477 aaKnown RBP eCLIP15.31■□□□□ 0.04
CLN8-207ENST00000524258 ZBED9Q6R2W3 1325 aa15.31■□□□□ 0.04
CLN8-207ENST00000524258 SH3TC1Q8TE82 1336 aa15.31■□□□□ 0.04
CLN8-207ENST00000524258 ARFGEF1Q9Y6D6 1849 aa15.31■□□□□ 0.04
CLN8-207ENST00000524258 NEURL1BA8MQ27 555 aa15.3■□□□□ 0.04
CLN8-207ENST00000524258 F6X3S4 739 aa15.3■□□□□ 0.04
CLN8-207ENST00000524258 NPHP1O15259 732 aa15.3■□□□□ 0.04
CLN8-207ENST00000524258 PRELPP51888 382 aa15.3■□□□□ 0.04
CLN8-207ENST00000524258 FKBP5Q13451 457 aaPredicted RBP15.3■□□□□ 0.04
CLN8-207ENST00000524258 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
CLN8-207ENST00000524258 SLX4Q8IY92 1834 aa15.3■□□□□ 0.04
CLN8-207ENST00000524258 ZBTB38Q8NAP3 1195 aaPredicted RBP15.3■□□□□ 0.04
CLN8-207ENST00000524258 SNED1Q8TER0 1413 aa15.3■□□□□ 0.04
CLN8-207ENST00000524258 DNAAF4Q8WXU2 420 aa15.3■□□□□ 0.04
CLN8-207ENST00000524258 CNKSR1Q969H4 720 aa15.3■□□□□ 0.04
CLN8-207ENST00000524258 PCCAP05165 728 aaPredicted RBP15.29■□□□□ 0.04
CLN8-207ENST00000524258 BRPF1P55201 1214 aaPredicted RBP15.29■□□□□ 0.04
CLN8-207ENST00000524258 CASP7P55210 303 aa15.29■□□□□ 0.04
CLN8-207ENST00000524258 CWF19L2Q2TBE0 894 aaKnown RBP15.29■□□□□ 0.04
CLN8-207ENST00000524258 BEND3Q5T5X7 828 aa15.29■□□□□ 0.04
CLN8-207ENST00000524258 PRPF40BQ6NWY9 871 aaKnown RBP15.29■□□□□ 0.04
CLN8-207ENST00000524258 SLC51AQ86UW1 340 aa15.29■□□□□ 0.04
CLN8-207ENST00000524258 CWC25Q9NXE8 425 aaPredicted RBP15.29■□□□□ 0.04
CLN8-207ENST00000524258 H7C1W4 665 aa15.28■□□□□ 0.04
CLN8-207ENST00000524258 NFKBIEO00221 500 aa15.28■□□□□ 0.04
CLN8-207ENST00000524258 RARSP54136 660 aaKnown RBP15.28■□□□□ 0.04
CLN8-207ENST00000524258 SF3B3Q15393 1217 aaKnown RBP15.28■□□□□ 0.04
CLN8-207ENST00000524258 LINS1Q8NG48 757 aa15.28■□□□□ 0.04
CLN8-207ENST00000524258 JARID2Q92833 1246 aaPredicted RBP15.28■□□□□ 0.04
CLN8-207ENST00000524258 NLRP3Q96P20 1036 aa15.28■□□□□ 0.04
CLN8-207ENST00000524258 CRAMP1Q96RY5 1269 aa15.28■□□□□ 0.04
CLN8-207ENST00000524258 IRS4O14654 1257 aaPredicted RBP15.27■□□□□ 0.04
CLN8-207ENST00000524258 C21orf2O43822 256 aa15.27■□□□□ 0.04
CLN8-207ENST00000524258 GCKRQ14397 625 aa15.27■□□□□ 0.04
CLN8-207ENST00000524258 OLFM4Q6UX06 510 aa15.27■□□□□ 0.04
CLN8-207ENST00000524258 ARHGAP27Q6ZUM4 889 aa15.27■□□□□ 0.04
CLN8-207ENST00000524258 DDX60Q8IY21 1712 aaKnown RBP15.26■□□□□ 0.03
CLN8-207ENST00000524258 CDHR2Q9BYE9 1310 aa15.26■□□□□ 0.03
CLN8-207ENST00000524258 RTL5Q5HYW3 569 aaPredicted RBP15.26■□□□□ 0.03
CLN8-207ENST00000524258 BCL2L13Q9BXK5 485 aa15.26■□□□□ 0.03
CLN8-207ENST00000524258 COL4A1P02462 1669 aa15.25■□□□□ 0.03
CLN8-207ENST00000524258 CHD4Q14839 1912 aa15.25■□□□□ 0.03
CLN8-207ENST00000524258 YY1P25490 414 aa15.25■□□□□ 0.03
CLN8-207ENST00000524258 ALDH1B1P30837 517 aa15.25■□□□□ 0.03
CLN8-207ENST00000524258 LAMB2P55268 1798 aa15.24■□□□□ 0.03
CLN8-207ENST00000524258 ABCC4O15439 1325 aa15.24■□□□□ 0.03
CLN8-207ENST00000524258 RASSF7Q02833 373 aa15.24■□□□□ 0.03
CLN8-207ENST00000524258 NEXNQ0ZGT2 675 aa15.24■□□□□ 0.03
CLN8-207ENST00000524258 RBM17Q96I25 401 aaKnown RBP15.24■□□□□ 0.03
CLN8-207ENST00000524258 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
CLN8-207ENST00000524258 PTPRCP08575 1304 aa15.23■□□□□ 0.03
CLN8-207ENST00000524258 LTBP3Q9NS15 1303 aa15.23■□□□□ 0.03
CLN8-207ENST00000524258 RPGRQ92834 1020 aaKnown RBP15.23■□□□□ 0.03
CLN8-207ENST00000524258 PLA2G12BQ9BX93 195 aa15.23■□□□□ 0.03
CLN8-207ENST00000524258 SMC4Q9NTJ3 1288 aa15.23■□□□□ 0.03
CLN8-207ENST00000524258 PDE8AO60658 829 aa15.22■□□□□ 0.03
CLN8-207ENST00000524258 FER1L6Q2WGJ9 1857 aa15.22■□□□□ 0.03
CLN8-207ENST00000524258 ALDH1L1O75891 902 aa15.21■□□□□ 0.03
CLN8-207ENST00000524258 GRAPQ13588 217 aa15.21■□□□□ 0.03
CLN8-207ENST00000524258 C9orf131Q5VYM1 1079 aa15.21■□□□□ 0.03
CLN8-207ENST00000524258 UBE3BQ7Z3V4 1068 aa15.21■□□□□ 0.03
CLN8-207ENST00000524258 TTLL11Q8NHH1 800 aa15.21■□□□□ 0.03
CLN8-207ENST00000524258 GRAPLQ8TC17 118 aaPredicted RBP15.21■□□□□ 0.03
CLN8-207ENST00000524258 CELF1Q92879 486 aaKnown RBP15.21■□□□□ 0.03
CLN8-207ENST00000524258 NOB1Q9ULX3 412 aaKnown RBP15.21■□□□□ 0.03
CLN8-207ENST00000524258 UTYO14607 1347 aa15.2■□□□□ 0.02
CLN8-207ENST00000524258 BCAR3O75815 825 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms