RNA–Protein interactions for RNA: ENST00000524092.1

TOP1MT-219, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 313 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-219ENST00000524092 SLX4Q8IY92 1834 aa29.8■■■□□ 2.36
TOP1MT-219ENST00000524092 SPINK5Q9NQ38 1064 aaPredicted RBP29.79■■■□□ 2.36
TOP1MT-219ENST00000524092 ARFGEF2Q9Y6D5 1785 aa29.79■■■□□ 2.36
TOP1MT-219ENST00000524092 NFKBIEO00221 500 aa29.78■■■□□ 2.36
TOP1MT-219ENST00000524092 GOLGA2Q08379 1002 aa29.78■■■□□ 2.36
TOP1MT-219ENST00000524092 SLC10A5Q5PT55 438 aa29.78■■■□□ 2.36
TOP1MT-219ENST00000524092 ISCA1Q9BUE6 129 aa29.78■■■□□ 2.36
TOP1MT-219ENST00000524092 ZNF219Q9P2Y4 722 aaPredicted RBP29.78■■■□□ 2.36
TOP1MT-219ENST00000524092 ZNF521Q96K83 1311 aa29.77■■■□□ 2.36
TOP1MT-219ENST00000524092 C7orf43Q8WVR3 580 aa29.77■■■□□ 2.36
TOP1MT-219ENST00000524092 RNF181Q9P0P0 153 aa29.77■■■□□ 2.36
TOP1MT-219ENST00000524092 ALDH1B1P30837 517 aa29.75■■■□□ 2.35
TOP1MT-219ENST00000524092 HOXA10P31260 410 aaPredicted RBP29.75■■■□□ 2.35
TOP1MT-219ENST00000524092 PRELPP51888 382 aa29.75■■■□□ 2.35
TOP1MT-219ENST00000524092 SOGA3Q5TF21 947 aa29.75■■■□□ 2.35
TOP1MT-219ENST00000524092 C3orf67Q6ZVT6 689 aa29.75■■■□□ 2.35
TOP1MT-219ENST00000524092 RIC3Q7Z5B4 369 aa29.75■■■□□ 2.35
TOP1MT-219ENST00000524092 TRMT112Q9UI30 125 aaKnown RBP29.75■■■□□ 2.35
TOP1MT-219ENST00000524092 SBF1O95248 1867 aa29.74■■■□□ 2.35
TOP1MT-219ENST00000524092 ATP5J2-PTCD1G3V325 749 aa29.74■■■□□ 2.35
TOP1MT-219ENST00000524092 LMNB1P20700 586 aa29.74■■■□□ 2.35
TOP1MT-219ENST00000524092 TRIM28Q13263 835 aaKnown RBP29.74■■■□□ 2.35
TOP1MT-219ENST00000524092 STK31Q9BXU1 1019 aa29.74■■■□□ 2.35
TOP1MT-219ENST00000524092 MYH16Q9H6N6 1097 aa29.74■■■□□ 2.35
TOP1MT-219ENST00000524092 GPBP1L1Q9HC44 474 aaPredicted RBP29.74■■■□□ 2.35
TOP1MT-219ENST00000524092 EXOSC9Q06265 439 aaKnown RBP29.73■■■□□ 2.35
TOP1MT-219ENST00000524092 SYNE4Q8N205 404 aa29.73■■■□□ 2.35
TOP1MT-219ENST00000524092 ZNF526Q8TF50 670 aaPredicted RBP29.73■■■□□ 2.35
TOP1MT-219ENST00000524092 RPGRQ92834 1020 aaKnown RBP29.73■■■□□ 2.35
TOP1MT-219ENST00000524092 NLRP3Q96P20 1036 aa29.73■■■□□ 2.35
TOP1MT-219ENST00000524092 CACNA1SQ13698 1873 aa29.73■■■□□ 2.35
TOP1MT-219ENST00000524092 SH3TC1Q8TE82 1336 aa29.72■■■□□ 2.35
TOP1MT-219ENST00000524092 TCERG1O14776 1098 aaKnown RBP29.72■■■□□ 2.35
TOP1MT-219ENST00000524092 FER1L6Q2WGJ9 1857 aa29.72■■■□□ 2.35
TOP1MT-219ENST00000524092 LTBP3Q9NS15 1303 aa29.71■■■□□ 2.35
TOP1MT-219ENST00000524092 VAMP4O75379 141 aa29.71■■■□□ 2.35
TOP1MT-219ENST00000524092 DDX58O95786 925 aaKnown RBP29.71■■■□□ 2.35
TOP1MT-219ENST00000524092 HCLS1P14317 486 aaPredicted RBP29.69■■■□□ 2.34
TOP1MT-219ENST00000524092 CCDC93Q567U6 631 aa29.69■■■□□ 2.34
TOP1MT-219ENST00000524092 ZNF428Q96B54 188 aa29.69■■■□□ 2.34
TOP1MT-219ENST00000524092 RBM17Q96I25 401 aaKnown RBP29.69■■■□□ 2.34
TOP1MT-219ENST00000524092 CRAMP1Q96RY5 1269 aa29.69■■■□□ 2.34
TOP1MT-219ENST00000524092 TAOK3Q9H2K8 898 aa29.69■■■□□ 2.34
TOP1MT-219ENST00000524092 SLC4A2P04920 1241 aa29.68■■■□□ 2.34
TOP1MT-219ENST00000524092 ZC3H4Q9UPT8 1303 aaKnown RBP29.68■■■□□ 2.34
TOP1MT-219ENST00000524092 G2E3Q7L622 706 aa29.67■■■□□ 2.34
TOP1MT-219ENST00000524092 MYD88Q99836 296 aa29.67■■■□□ 2.34
TOP1MT-219ENST00000524092 METTL22Q9BUU2 404 aaPredicted RBP29.67■■■□□ 2.34
TOP1MT-219ENST00000524092 DIEXFQ68CQ4 756 aaKnown RBP29.66■■■□□ 2.34
TOP1MT-219ENST00000524092 OLFM4Q6UX06 510 aa29.66■■■□□ 2.34
TOP1MT-219ENST00000524092 KSR2Q6VAB6 950 aa29.66■■■□□ 2.34
TOP1MT-219ENST00000524092 FAM89AQ96GI7 184 aa29.66■■■□□ 2.34
TOP1MT-219ENST00000524092 MAP3K2Q9Y2U5 619 aa29.66■■■□□ 2.34
TOP1MT-219ENST00000524092 PI4KAP2A4QPH2 592 aa29.65■■■□□ 2.34
TOP1MT-219ENST00000524092 PI4KAP1Q8N8J0 262 aa29.65■■■□□ 2.34
TOP1MT-219ENST00000524092 CCDC191Q8NCU4 936 aa29.64■■■□□ 2.34
TOP1MT-219ENST00000524092 SNED1Q8TER0 1413 aa29.63■■■□□ 2.33
TOP1MT-219ENST00000524092 RTKN2Q8IZC4 609 aa29.63■■■□□ 2.33
TOP1MT-219ENST00000524092 FKBP4Q02790 459 aaKnown RBP eCLIP29.62■■■□□ 2.33
TOP1MT-219ENST00000524092 FLIIQ13045 1269 aa29.62■■■□□ 2.33
TOP1MT-219ENST00000524092 CC2D2BQ6DHV5 1058 aa29.62■■■□□ 2.33
TOP1MT-219ENST00000524092 ZBTB38Q8NAP3 1195 aaPredicted RBP29.62■■■□□ 2.33
TOP1MT-219ENST00000524092 LAMB2P55268 1798 aa29.62■■■□□ 2.33
TOP1MT-219ENST00000524092 PPEF1O14829 653 aaPredicted RBP29.61■■■□□ 2.33
TOP1MT-219ENST00000524092 DDX60Q8IY21 1712 aaKnown RBP29.61■■■□□ 2.33
TOP1MT-219ENST00000524092 ABCC4O15439 1325 aa29.61■■■□□ 2.33
TOP1MT-219ENST00000524092 CCDC88AQ3V6T2 1871 aa29.6■■■□□ 2.33
TOP1MT-219ENST00000524092 C1QTNF8P60827 252 aa29.6■■■□□ 2.33
TOP1MT-219ENST00000524092 CWC25Q9NXE8 425 aaPredicted RBP29.6■■■□□ 2.33
TOP1MT-219ENST00000524092 E9PSI1 815 aa29.59■■■□□ 2.33
TOP1MT-219ENST00000524092 IRS4O14654 1257 aaPredicted RBP29.59■■■□□ 2.33
TOP1MT-219ENST00000524092 KIF3CO14782 793 aa29.59■■■□□ 2.33
TOP1MT-219ENST00000524092 IGKV5-2P06315 115 aa29.59■■■□□ 2.33
TOP1MT-219ENST00000524092 RTL5Q5HYW3 569 aaPredicted RBP29.59■■■□□ 2.33
TOP1MT-219ENST00000524092 MIER1Q8N108 512 aa29.59■■■□□ 2.33
TOP1MT-219ENST00000524092 KDM2BQ8NHM5 1336 aa29.59■■■□□ 2.33
TOP1MT-219ENST00000524092 TIAM2Q8IVF5 1701 aa29.59■■■□□ 2.33
TOP1MT-219ENST00000524092 PCCAP05165 728 aaPredicted RBP29.58■■■□□ 2.33
TOP1MT-219ENST00000524092 SF3B3Q15393 1217 aaKnown RBP29.58■■■□□ 2.33
TOP1MT-219ENST00000524092 NMRK2Q9NPI5 230 aa29.58■■■□□ 2.33
TOP1MT-219ENST00000524092 CACNA1FO60840 1977 aa29.57■■■□□ 2.32
TOP1MT-219ENST00000524092 GRIPAP1Q4V328 841 aa29.57■■■□□ 2.32
TOP1MT-219ENST00000524092 DDX46Q7L014 1031 aaKnown RBP29.57■■■□□ 2.32
TOP1MT-219ENST00000524092 SLC51AQ86UW1 340 aa29.57■■■□□ 2.32
TOP1MT-219ENST00000524092 PSMD1Q99460 953 aa29.57■■■□□ 2.32
TOP1MT-219ENST00000524092 DICER1Q9UPY3 1922 aaKnown RBP29.56■■■□□ 2.32
TOP1MT-219ENST00000524092 BBOX1O75936 387 aa29.56■■■□□ 2.32
TOP1MT-219ENST00000524092 SLFN5Q08AF3 891 aa29.56■■■□□ 2.32
TOP1MT-219ENST00000524092 NEXNQ0ZGT2 675 aa29.56■■■□□ 2.32
TOP1MT-219ENST00000524092 FKBP5Q13451 457 aaPredicted RBP29.56■■■□□ 2.32
TOP1MT-219ENST00000524092 ZNF277Q9NRM2 450 aaPredicted RBP29.56■■■□□ 2.32
TOP1MT-219ENST00000524092 ATP6V0A2Q9Y487 856 aa29.56■■■□□ 2.32
TOP1MT-219ENST00000524092 GLTPD2A6NH11 291 aa29.55■■■□□ 2.32
TOP1MT-219ENST00000524092 GRAPQ13588 217 aa29.55■■■□□ 2.32
TOP1MT-219ENST00000524092 GRAPLQ8TC17 118 aaPredicted RBP29.55■■■□□ 2.32
TOP1MT-219ENST00000524092 HSP90B1P14625 803 aaKnown RBP29.54■■■□□ 2.32
TOP1MT-219ENST00000524092 NEURL1BA8MQ27 555 aa29.53■■■□□ 2.32
TOP1MT-219ENST00000524092 DNAAF4Q8WXU2 420 aa29.53■■■□□ 2.32
TOP1MT-219ENST00000524092 CWF19L2Q2TBE0 894 aaKnown RBP29.52■■■□□ 2.32
TOP1MT-219ENST00000524092 JARID2Q92833 1246 aaPredicted RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms