RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SYNE4Q8N205 404 aa16.4■□□□□ 0.22
VEGFA-224ENST00000523873 METTL22Q9BUU2 404 aaPredicted RBP16.4■□□□□ 0.22
VEGFA-224ENST00000523873 MYH3P11055 1940 aa16.4■□□□□ 0.22
VEGFA-224ENST00000523873 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
VEGFA-224ENST00000523873 SRCAPQ6ZRS2 3230 aa16.39■□□□□ 0.21
VEGFA-224ENST00000523873 GTF2E1P29083 439 aaPredicted RBP16.39■□□□□ 0.21
VEGFA-224ENST00000523873 TGFB2P61812 414 aa16.39■□□□□ 0.21
VEGFA-224ENST00000523873 C2CD5Q86YS7 1000 aa16.39■□□□□ 0.21
VEGFA-224ENST00000523873 UTP14AQ9BVJ6 771 aaKnown RBP16.39■□□□□ 0.21
VEGFA-224ENST00000523873 SMC4Q9NTJ3 1288 aa16.39■□□□□ 0.21
VEGFA-224ENST00000523873 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-224ENST00000523873 KCNA3P22001 575 aa16.38■□□□□ 0.21
VEGFA-224ENST00000523873 RTL5Q5HYW3 569 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-224ENST00000523873 PPP1R42Q7Z4L9 355 aa16.38■□□□□ 0.21
VEGFA-224ENST00000523873 JARID2Q92833 1246 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-224ENST00000523873 NYXQ9GZU5 481 aa16.38■□□□□ 0.21
VEGFA-224ENST00000523873 IGKV5-2P06315 115 aa16.37■□□□□ 0.21
VEGFA-224ENST00000523873 YBX3P16989 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
VEGFA-224ENST00000523873 CWF19L2Q2TBE0 894 aaKnown RBP16.37■□□□□ 0.21
VEGFA-224ENST00000523873 ALDH1L2Q3SY69 923 aa16.37■□□□□ 0.21
VEGFA-224ENST00000523873 C3orf67Q6ZVT6 689 aa16.37■□□□□ 0.21
VEGFA-224ENST00000523873 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
VEGFA-224ENST00000523873 BRIP1Q9BX63 1249 aa16.37■□□□□ 0.21
VEGFA-224ENST00000523873 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
VEGFA-224ENST00000523873 CHD4Q14839 1912 aa16.37■□□□□ 0.21
VEGFA-224ENST00000523873 CCDC88AQ3V6T2 1871 aa16.36■□□□□ 0.21
VEGFA-224ENST00000523873 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
VEGFA-224ENST00000523873 RARSP54136 660 aaKnown RBP16.36■□□□□ 0.21
VEGFA-224ENST00000523873 PDE6BP35913 854 aa16.35■□□□□ 0.21
VEGFA-224ENST00000523873 GPR162Q16538 588 aa16.35■□□□□ 0.21
VEGFA-224ENST00000523873 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
VEGFA-224ENST00000523873 SPEF2Q9C093 1822 aa16.35■□□□□ 0.21
VEGFA-224ENST00000523873 NEURL1BA8MQ27 555 aa16.34■□□□□ 0.21
VEGFA-224ENST00000523873 H0YIN7 160 aa16.34■□□□□ 0.21
VEGFA-224ENST00000523873 HCLS1P14317 486 aaPredicted RBP16.34■□□□□ 0.21
VEGFA-224ENST00000523873 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
VEGFA-224ENST00000523873 TRIM28Q13263 835 aaKnown RBP16.34■□□□□ 0.21
VEGFA-224ENST00000523873 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.213e-16■□□□□ 9
VEGFA-224ENST00000523873 CWC25Q9NXE8 425 aaPredicted RBP16.34■□□□□ 0.21
VEGFA-224ENST00000523873 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
VEGFA-224ENST00000523873 SH3TC1Q8TE82 1336 aa16.34■□□□□ 0.21
VEGFA-224ENST00000523873 BCAR3O75815 825 aa16.33■□□□□ 0.2
VEGFA-224ENST00000523873 SRGNP10124 158 aa16.33■□□□□ 0.2
VEGFA-224ENST00000523873 SLC4A10Q6U841 1118 aa16.33■□□□□ 0.2
VEGFA-224ENST00000523873 CCDC191Q8NCU4 936 aa16.33■□□□□ 0.2
VEGFA-224ENST00000523873 PIM2Q9P1W9 311 aa16.33■□□□□ 0.2
VEGFA-224ENST00000523873 NOB1Q9ULX3 412 aaKnown RBP16.33■□□□□ 0.2
VEGFA-224ENST00000523873 RIC1Q4ADV7 1423 aa16.33■□□□□ 0.2
VEGFA-224ENST00000523873 COL4A1P02462 1669 aa16.32■□□□□ 0.2
VEGFA-224ENST00000523873 BEND3Q5T5X7 828 aa16.32■□□□□ 0.2
VEGFA-224ENST00000523873 SBF1O95248 1867 aa16.31■□□□□ 0.2
VEGFA-224ENST00000523873 PTPRCP08575 1304 aa16.31■□□□□ 0.2
VEGFA-224ENST00000523873 RNF123Q5XPI4 1314 aa16.31■□□□□ 0.2
VEGFA-224ENST00000523873 DALRD3Q5D0E6 543 aaKnown RBP16.31■□□□□ 0.2
VEGFA-224ENST00000523873 SLC10A5Q5PT55 438 aa16.31■□□□□ 0.2
VEGFA-224ENST00000523873 ZBTB38Q8NAP3 1195 aaPredicted RBP16.31■□□□□ 0.2
VEGFA-224ENST00000523873 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
VEGFA-224ENST00000523873 FER1L6Q2WGJ9 1857 aa16.31■□□□□ 0.2
VEGFA-224ENST00000523873 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
VEGFA-224ENST00000523873 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
VEGFA-224ENST00000523873 IRS4O14654 1257 aaPredicted RBP16.3■□□□□ 0.2
VEGFA-224ENST00000523873 PCCAP05165 728 aaPredicted RBP16.3■□□□□ 0.2
VEGFA-224ENST00000523873 GCKRQ14397 625 aa16.3■□□□□ 0.2
VEGFA-224ENST00000523873 LINS1Q8NG48 757 aa16.3■□□□□ 0.2
VEGFA-224ENST00000523873 MASTLQ96GX5 879 aa16.3■□□□□ 0.2
VEGFA-224ENST00000523873 TNNQ9UQP3 1299 aa16.3■□□□□ 0.2
VEGFA-224ENST00000523873 NPR1P16066 1061 aa16.29■□□□□ 0.2
VEGFA-224ENST00000523873 CRY2Q49AN0 593 aa16.29■□□□□ 0.2
VEGFA-224ENST00000523873 STYK1Q6J9G0 422 aa16.29■□□□□ 0.2
VEGFA-224ENST00000523873 UBE3BQ7Z3V4 1068 aa16.29■□□□□ 0.2
VEGFA-224ENST00000523873 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
VEGFA-224ENST00000523873 TTLL6Q8N841 843 aa16.29■□□□□ 0.2
VEGFA-224ENST00000523873 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
VEGFA-224ENST00000523873 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
VEGFA-224ENST00000523873 RPGRQ92834 1020 aaKnown RBP16.28■□□□□ 0.2
VEGFA-224ENST00000523873 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
VEGFA-224ENST00000523873 PDZRN3Q9UPQ7 1066 aa16.28■□□□□ 0.2
VEGFA-224ENST00000523873 KIF16BQ96L93 1317 aa16.27■□□□□ 0.2
VEGFA-224ENST00000523873 H7C1W4 665 aa16.27■□□□□ 0.2
VEGFA-224ENST00000523873 PRPF40BQ6NWY9 871 aaKnown RBP16.27■□□□□ 0.2
VEGFA-224ENST00000523873 CCDC85AQ96PX6 553 aaPredicted RBP16.27■□□□□ 0.2
VEGFA-224ENST00000523873 SRCIN1Q9C0H9 1055 aa16.27■□□□□ 0.2
VEGFA-224ENST00000523873 CDHR2Q9BYE9 1310 aa16.26■□□□□ 0.19
VEGFA-224ENST00000523873 CASP7P55210 303 aa16.26■□□□□ 0.19
VEGFA-224ENST00000523873 CNKSR1Q969H4 720 aa16.26■□□□□ 0.19
VEGFA-224ENST00000523873 ABCC4O15439 1325 aa16.25■□□□□ 0.19
VEGFA-224ENST00000523873 C21orf2O43822 256 aa16.25■□□□□ 0.19
VEGFA-224ENST00000523873 ALDH1L1O75891 902 aa16.25■□□□□ 0.19
VEGFA-224ENST00000523873 OLFM4Q6UX06 510 aa16.25■□□□□ 0.19
VEGFA-224ENST00000523873 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
VEGFA-224ENST00000523873 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
VEGFA-224ENST00000523873 DICER1Q9UPY3 1922 aaKnown RBP16.24■□□□□ 0.19
VEGFA-224ENST00000523873 GRM8O00222 908 aa16.24■□□□□ 0.19
VEGFA-224ENST00000523873 GRIN3BO60391 1043 aa16.24■□□□□ 0.19
VEGFA-224ENST00000523873 PDE8AO60658 829 aa16.24■□□□□ 0.19
VEGFA-224ENST00000523873 TRIM27P14373 513 aa16.24■□□□□ 0.19
VEGFA-224ENST00000523873 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-224ENST00000523873 ARHGAP27Q6ZUM4 889 aa16.24■□□□□ 0.19
VEGFA-224ENST00000523873 CLUAP1Q96AJ1 413 aa16.24■□□□□ 0.19
VEGFA-224ENST00000523873 LRRC37AA6NMS7 1700 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms