RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 CYP2C19P33261 490 aa8.72□□□□□ -1.01
HDAC9-227ENST00000523867 SLC4A10Q6U841 1118 aa8.72□□□□□ -1.01
HDAC9-227ENST00000523867 SDR16C5Q8N3Y7 309 aa8.72□□□□□ -1.01
HDAC9-227ENST00000523867 PMM1Q92871 262 aa8.72□□□□□ -1.01
HDAC9-227ENST00000523867 SLC26A8Q96RN1 970 aa8.72□□□□□ -1.01
HDAC9-227ENST00000523867 METP08581 1390 aa8.72□□□□□ -1.01
HDAC9-227ENST00000523867 CREB3O43889 395 aa8.71□□□□□ -1.01
HDAC9-227ENST00000523867 PARNO95453 639 aaKnown RBP8.71□□□□□ -1.01
HDAC9-227ENST00000523867 NEK4P51957 841 aa8.71□□□□□ -1.01
HDAC9-227ENST00000523867 PDE1AP54750 535 aa8.71□□□□□ -1.01
HDAC9-227ENST00000523867 NCBP1Q09161 790 aaKnown RBP8.71□□□□□ -1.01
HDAC9-227ENST00000523867 ATL2Q8NHH9 583 aa8.71□□□□□ -1.01
HDAC9-227ENST00000523867 GPT2Q8TD30 523 aa8.71□□□□□ -1.01
HDAC9-227ENST00000523867 ZNF219Q9P2Y4 722 aaPredicted RBP8.71□□□□□ -1.01
HDAC9-227ENST00000523867 ZDHHC9Q9Y397 364 aa8.71□□□□□ -1.01
HDAC9-227ENST00000523867 A6NJR5 290 aa8.71□□□□□ -1.02
HDAC9-227ENST00000523867 NBPF20Q3BBV1 942 aa8.71□□□□□ -1.02
HDAC9-227ENST00000523867 MUM1L1Q5H9M0 696 aa8.71□□□□□ -1.02
HDAC9-227ENST00000523867 ICE2Q659A1 982 aa8.71□□□□□ -1.02
HDAC9-227ENST00000523867 CCDC97Q96F63 343 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-227ENST00000523867 OSBPL3Q9H4L5 887 aa8.71□□□□□ -1.02
HDAC9-227ENST00000523867 U3KPZ7 1027 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-227ENST00000523867 EPB41L2O43491 1005 aaKnown RBP8.7□□□□□ -1.02
HDAC9-227ENST00000523867 HSPA1LP34931 641 aa8.7□□□□□ -1.02
HDAC9-227ENST00000523867 CCT4P50991 539 aaKnown RBP8.7□□□□□ -1.02
HDAC9-227ENST00000523867 MRRFQ96E11 262 aaKnown RBP8.7□□□□□ -1.02
HDAC9-227ENST00000523867 CEP83Q9Y592 693 aa8.7□□□□□ -1.02
HDAC9-227ENST00000523867 GOLGA6L6A8MZA4 724 aa8.7□□□□□ -1.02
HDAC9-227ENST00000523867 GUCY2CP25092 1073 aa8.7□□□□□ -1.02
HDAC9-227ENST00000523867 MCM2P49736 904 aa8.7□□□□□ -1.02
HDAC9-227ENST00000523867 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
HDAC9-227ENST00000523867 TSPY26PQ9H489 355 aa8.7□□□□□ -1.02
HDAC9-227ENST00000523867 MIS18AQ9NYP9 233 aa8.7□□□□□ -1.02
HDAC9-227ENST00000523867 GABBR1Q9UBS5 961 aa8.7□□□□□ -1.02
HDAC9-227ENST00000523867 RSPH14Q9UHP6 348 aa8.7□□□□□ -1.02
HDAC9-227ENST00000523867 F6X3S4 739 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 RAD51AP2Q09MP3 1159 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 HSP90AB2PQ58FF8 381 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 CCDC181Q5TID7 509 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 MORC4Q8TE76 937 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 TMX3Q96JJ7 454 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 SETD1AO15047 1707 aaKnown RBP8.69□□□□□ -1.02
HDAC9-227ENST00000523867 SYCE3A1L190 88 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 SMTNL1A8MU46 457 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 SH3BP5O60239 455 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 GNAI2P04899 355 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 ERCC3P19447 782 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 G2E3Q7L622 706 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 BANK1Q8NDB2 785 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 KIAA1524Q8TCG1 905 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 RTF1Q92541 710 aaKnown RBP8.69□□□□□ -1.02
HDAC9-227ENST00000523867 SYAP1Q96A49 352 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-227ENST00000523867 CHAMP1Q96JM3 812 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 TMEM63CQ9P1W3 806 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 TSPYL4Q9UJ04 414 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 EXOC6BQ9Y2D4 811 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 TTC21BQ7Z4L5 1316 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 SLIT1O75093 1534 aa8.69□□□□□ -1.02
HDAC9-227ENST00000523867 GOLGA6CA6NDK9 693 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 GOLGA6BA6NDN3 693 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 CCDC172P0C7W6 258 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 GOLGA6DP0CG33 693 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 HNRNPH2P55795 449 aaKnown RBP8.68□□□□□ -1.02
HDAC9-227ENST00000523867 ESYT1Q9BSJ8 1104 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 GOLGA6AQ9NYA3 693 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 PAXBP1Q9Y5B6 917 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 MON2Q7Z3U7 1717 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 PRR36Q9H6K5 1346 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 CRB1P82279 1406 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 ARID4AP29374 1257 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-227ENST00000523867 SLFNL1Q499Z3 407 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 TSHZ3Q63HK5 1081 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 ZNF397Q8NF99 534 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-227ENST00000523867 SREK1Q8WXA9 508 aaKnown RBP8.68□□□□□ -1.02
HDAC9-227ENST00000523867 LRRCC1Q9C099 1032 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 NRKQ7Z2Y5 1582 aa8.68□□□□□ -1.02
HDAC9-227ENST00000523867 KIF1CO43896 1103 aaKnown RBP8.67□□□□□ -1.02
HDAC9-227ENST00000523867 MX1P20591 662 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 HDGFP51858 240 aaKnown RBP8.67□□□□□ -1.02
HDAC9-227ENST00000523867 ZNF280DQ6N043 979 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 CLEC4GQ6UXB4 293 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 RNF214Q8ND24 703 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 RILPL2Q969X0 211 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 KIF1BPQ96EK5 621 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 STK31Q9BXU1 1019 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 ANO2Q9NQ90 1003 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 NSFL1CQ9UNZ2 370 aaKnown RBP8.67□□□□□ -1.02
HDAC9-227ENST00000523867 ARHGAP23Q9P227 1491 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 FOXO3O43524 673 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 ACEP12821 1306 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 CASQ1P31415 396 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 FLIIQ13045 1269 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 TXLNBQ8N3L3 684 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 SPOCK3Q9BQ16 436 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.67□□□□□ -1.02
HDAC9-227ENST00000523867 GNAI3P08754 354 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 MCCD1P59942 119 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-227ENST00000523867 SATB1Q01826 763 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 CUL4AQ13619 759 aa8.67□□□□□ -1.02
HDAC9-227ENST00000523867 MTHFSDQ2M296 383 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms