RNA–Protein interactions for RNA: ENST00000523639.5

CCNC-214, Transcript of cyclin C, humanhuman

TSL 2

Gene CCNC, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-214ENST00000523639 NLRP10Q86W26 655 aa22.28■■□□□ 1.16
CCNC-214ENST00000523639 RTKN2Q8IZC4 609 aa22.28■■□□□ 1.16
CCNC-214ENST00000523639 C8orf58Q8NAV2 365 aa22.28■■□□□ 1.16
CCNC-214ENST00000523639 ZNF526Q8TF50 670 aaPredicted RBP22.28■■□□□ 1.16
CCNC-214ENST00000523639 TRIM28Q13263 835 aaKnown RBP22.27■■□□□ 1.16
CCNC-214ENST00000523639 CCDC93Q567U6 631 aa22.27■■□□□ 1.16
CCNC-214ENST00000523639 CRAMP1Q96RY5 1269 aa22.27■■□□□ 1.16
CCNC-214ENST00000523639 TAOK3Q9H2K8 898 aa22.27■■□□□ 1.16
CCNC-214ENST00000523639 RASSF7Q02833 373 aa22.26■■□□□ 1.15
CCNC-214ENST00000523639 RPGRQ92834 1020 aaKnown RBP22.26■■□□□ 1.15
CCNC-214ENST00000523639 RBM17Q96I25 401 aaKnown RBP22.26■■□□□ 1.15
CCNC-214ENST00000523639 ELL2O00472 640 aaPredicted RBP22.25■■□□□ 1.15
CCNC-214ENST00000523639 ABCC12Q96J65 1359 aa22.25■■□□□ 1.15
CCNC-214ENST00000523639 COL11A2P13942 1736 aaPredicted RBP22.24■■□□□ 1.15
CCNC-214ENST00000523639 KIF3CO14782 793 aa22.24■■□□□ 1.15
CCNC-214ENST00000523639 GOLGA2Q08379 1002 aa22.24■■□□□ 1.15
CCNC-214ENST00000523639 ISCA1Q9BUE6 129 aa22.24■■□□□ 1.15
CCNC-214ENST00000523639 ZNF219Q9P2Y4 722 aaPredicted RBP22.24■■□□□ 1.15
CCNC-214ENST00000523639 TRMT112Q9UI30 125 aaKnown RBP22.24■■□□□ 1.15
CCNC-214ENST00000523639 DDX58O95786 925 aaKnown RBP22.23■■□□□ 1.15
CCNC-214ENST00000523639 DPY19L2Q6NUT2 758 aa22.23■■□□□ 1.15
CCNC-214ENST00000523639 FAM9BQ8IZU0 186 aa22.23■■□□□ 1.15
CCNC-214ENST00000523639 SH3TC1Q8TE82 1336 aa22.23■■□□□ 1.15
CCNC-214ENST00000523639 SBF1O95248 1867 aa22.22■■□□□ 1.15
CCNC-214ENST00000523639 GLTPD2A6NH11 291 aa22.22■■□□□ 1.15
CCNC-214ENST00000523639 TOMM70O94826 608 aa22.22■■□□□ 1.15
CCNC-214ENST00000523639 PRELPP51888 382 aa22.22■■□□□ 1.15
CCNC-214ENST00000523639 RIC3Q7Z5B4 369 aa22.22■■□□□ 1.15
CCNC-214ENST00000523639 HSP90B1P14625 803 aaKnown RBP22.21■■□□□ 1.15
CCNC-214ENST00000523639 FKBP4Q02790 459 aaKnown RBP eCLIP22.21■■□□□ 1.15
CCNC-214ENST00000523639 TSR2Q969E8 191 aaKnown RBP22.21■■□□□ 1.15
CCNC-214ENST00000523639 STK31Q9BXU1 1019 aa22.21■■□□□ 1.15
CCNC-214ENST00000523639 SLX4Q8IY92 1834 aa22.21■■□□□ 1.15
CCNC-214ENST00000523639 ARFGEF2Q9Y6D5 1785 aa22.2■■□□□ 1.14
CCNC-214ENST00000523639 TWISTNBQ3B726 338 aaPredicted RBP22.2■■□□□ 1.14
CCNC-214ENST00000523639 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
CCNC-214ENST00000523639 TSPYL6Q8N831 410 aa22.2■■□□□ 1.14
CCNC-214ENST00000523639 TMX4Q9H1E5 349 aaPredicted RBP22.2■■□□□ 1.14
CCNC-214ENST00000523639 BBOX1O75936 387 aa22.19■■□□□ 1.14
CCNC-214ENST00000523639 PSMD1Q99460 953 aa22.19■■□□□ 1.14
CCNC-214ENST00000523639 PHAXQ9H814 394 aaKnown RBP22.19■■□□□ 1.14
CCNC-214ENST00000523639 FER1L6Q2WGJ9 1857 aa22.18■■□□□ 1.14
CCNC-214ENST00000523639 C16orf71Q8IYS4 520 aaPredicted RBP22.17■■□□□ 1.14
CCNC-214ENST00000523639 CCDC191Q8NCU4 936 aa22.17■■□□□ 1.14
CCNC-214ENST00000523639 MYH16Q9H6N6 1097 aa22.17■■□□□ 1.14
CCNC-214ENST00000523639 NMRK2Q9NPI5 230 aa22.17■■□□□ 1.14
CCNC-214ENST00000523639 VEGFAP15692 232 aaPredicted RBP22.16■■□□□ 1.14
CCNC-214ENST00000523639 TMC4Q7Z404 712 aa22.16■■□□□ 1.14
CCNC-214ENST00000523639 VPS33BQ9H267 617 aa22.16■■□□□ 1.14
CCNC-214ENST00000523639 FANCIQ9NVI1 1328 aa22.15■■□□□ 1.14
CCNC-214ENST00000523639 ATP5J2-PTCD1G3V325 749 aa22.15■■□□□ 1.14
CCNC-214ENST00000523639 PPEF1O14829 653 aaPredicted RBP22.15■■□□□ 1.14
CCNC-214ENST00000523639 HCLS1P14317 486 aaPredicted RBP22.15■■□□□ 1.14
CCNC-214ENST00000523639 SF3B3Q15393 1217 aaKnown RBP22.15■■□□□ 1.14
CCNC-214ENST00000523639 KSR2Q6VAB6 950 aa22.15■■□□□ 1.14
CCNC-214ENST00000523639 C3orf67Q6ZVT6 689 aa22.15■■□□□ 1.14
CCNC-214ENST00000523639 DDX46Q7L014 1031 aaKnown RBP22.15■■□□□ 1.14
CCNC-214ENST00000523639 RBM46Q8TBY0 533 aaKnown RBP22.15■■□□□ 1.14
CCNC-214ENST00000523639 METTL22Q9BUU2 404 aaPredicted RBP22.15■■□□□ 1.14
CCNC-214ENST00000523639 RRAGCQ9HB90 399 aa22.15■■□□□ 1.14
CCNC-214ENST00000523639 SALL2Q9Y467 1007 aaPredicted RBP22.15■■□□□ 1.14
CCNC-214ENST00000523639 ANKRD36CQ5JPF3 1778 aa22.15■■□□□ 1.14
CCNC-214ENST00000523639 SYNE4Q8N205 404 aa22.14■■□□□ 1.13
CCNC-214ENST00000523639 ZBTB38Q8NAP3 1195 aaPredicted RBP22.14■■□□□ 1.13
CCNC-214ENST00000523639 ATP6V0A2Q9Y487 856 aa22.14■■□□□ 1.13
CCNC-214ENST00000523639 CCER2I3L3R5 266 aa22.13■■□□□ 1.13
CCNC-214ENST00000523639 SLC4A2P04920 1241 aa22.13■■□□□ 1.13
CCNC-214ENST00000523639 SP8Q8IXZ3 490 aa22.13■■□□□ 1.13
CCNC-214ENST00000523639 FAM89AQ96GI7 184 aa22.13■■□□□ 1.13
CCNC-214ENST00000523639 TNRC6CQ9HCJ0 1690 aaKnown RBP22.13■■□□□ 1.13
CCNC-214ENST00000523639 SENP3-EIF4A1A0A087X0R7 540 aa22.12■■□□□ 1.13
CCNC-214ENST00000523639 VAMP4O75379 141 aa22.12■■□□□ 1.13
CCNC-214ENST00000523639 IARSP41252 1262 aaKnown RBP22.12■■□□□ 1.13
CCNC-214ENST00000523639 FSTL1Q12841 308 aa22.12■■□□□ 1.13
CCNC-214ENST00000523639 ABCC4O15439 1325 aa22.11■■□□□ 1.13
CCNC-214ENST00000523639 PCCAP05165 728 aaPredicted RBP22.11■■□□□ 1.13
CCNC-214ENST00000523639 NEXNQ0ZGT2 675 aa22.11■■□□□ 1.13
CCNC-214ENST00000523639 GRAPQ13588 217 aa22.11■■□□□ 1.13
CCNC-214ENST00000523639 GRAPLQ8TC17 118 aaPredicted RBP22.11■■□□□ 1.13
CCNC-214ENST00000523639 MYD88Q99836 296 aa22.11■■□□□ 1.13
CCNC-214ENST00000523639 ZNF277Q9NRM2 450 aaPredicted RBP22.11■■□□□ 1.13
CCNC-214ENST00000523639 CWC25Q9NXE8 425 aaPredicted RBP22.11■■□□□ 1.13
CCNC-214ENST00000523639 SNED1Q8TER0 1413 aa22.11■■□□□ 1.13
CCNC-214ENST00000523639 PI4KAP2A4QPH2 592 aa22.1■■□□□ 1.13
CCNC-214ENST00000523639 IRS4O14654 1257 aaPredicted RBP22.1■■□□□ 1.13
CCNC-214ENST00000523639 HSPA6P17066 643 aa22.1■■□□□ 1.13
CCNC-214ENST00000523639 OLFM4Q6UX06 510 aa22.1■■□□□ 1.13
CCNC-214ENST00000523639 PI4KAP1Q8N8J0 262 aa22.1■■□□□ 1.13
CCNC-214ENST00000523639 SUPT20HQ8NEM7 779 aa22.1■■□□□ 1.13
CCNC-214ENST00000523639 JDP2Q8WYK2 163 aa22.1■■□□□ 1.13
CCNC-214ENST00000523639 MAP3K2Q9Y2U5 619 aa22.1■■□□□ 1.13
CCNC-214ENST00000523639 DICER1Q9UPY3 1922 aaKnown RBP22.1■■□□□ 1.13
CCNC-214ENST00000523639 EXOSC9Q06265 439 aaKnown RBP22.09■■□□□ 1.13
CCNC-214ENST00000523639 ZNF521Q96K83 1311 aa22.08■■□□□ 1.13
CCNC-214ENST00000523639 FZD9O00144 591 aa22.08■■□□□ 1.13
CCNC-214ENST00000523639 RTFDC1Q9BY42 306 aaPredicted RBP22.08■■□□□ 1.13
CCNC-214ENST00000523639 CCDC88AQ3V6T2 1871 aa22.07■■□□□ 1.12
CCNC-214ENST00000523639 CACNA1SQ13698 1873 aa22.07■■□□□ 1.12
CCNC-214ENST00000523639 IQCA1LA6NCM1 817 aa22.06■■□□□ 1.12
CCNC-214ENST00000523639 PDE8AO60658 829 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms