RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 TBC1D9BQ66K14 1250 aa11.65□□□□□ -0.54
SDCBP-212ENST00000523483 CENPQQ7L2Z9 268 aaPredicted RBP11.65□□□□□ -0.54
SDCBP-212ENST00000523483 KLHDC4Q8TBB5 520 aa11.65□□□□□ -0.54
SDCBP-212ENST00000523483 ERVV-1B6SEH8 477 aa11.64□□□□□ -0.55
SDCBP-212ENST00000523483 ANO8Q9HCE9 1232 aaPredicted RBP11.64□□□□□ -0.55
SDCBP-212ENST00000523483 NARFQ9UHQ1 456 aa11.64□□□□□ -0.55
SDCBP-212ENST00000523483 UBN2Q6ZU65 1347 aa11.64□□□□□ -0.55
SDCBP-212ENST00000523483 AAMPQ13685 434 aa11.64□□□□□ -0.55
SDCBP-212ENST00000523483 EPHA10Q5JZY3 1008 aa11.64□□□□□ -0.55
SDCBP-212ENST00000523483 SUSD4Q5VX71 490 aa11.64□□□□□ -0.55
SDCBP-212ENST00000523483 LMBR1LQ6UX01 489 aa11.64□□□□□ -0.55
SDCBP-212ENST00000523483 LNPKQ9C0E8 428 aa11.64□□□□□ -0.55
SDCBP-212ENST00000523483 STK32BQ9NY57 414 aa11.64□□□□□ -0.55
SDCBP-212ENST00000523483 SURF6O75683 361 aaKnown RBP11.64□□□□□ -0.55
SDCBP-212ENST00000523483 NBPF5PQ86XG9 351 aaPredicted RBP11.64□□□□□ -0.55
SDCBP-212ENST00000523483 ISCA1Q9BUE6 129 aa11.64□□□□□ -0.55
SDCBP-212ENST00000523483 PA2G4Q9UQ80 394 aaKnown RBP11.64□□□□□ -0.55
SDCBP-212ENST00000523483 RPAP2Q8IXW5 612 aaPredicted RBP11.63□□□□□ -0.55
SDCBP-212ENST00000523483 ANKRD44Q8N8A2 993 aa11.63□□□□□ -0.55
SDCBP-212ENST00000523483 ATP10DQ9P241 1426 aa11.63□□□□□ -0.55
SDCBP-212ENST00000523483 CAMKK2Q96RR4 588 aa11.63□□□□□ -0.55
SDCBP-212ENST00000523483 HDAC5Q9UQL6 1122 aa11.63□□□□□ -0.55
SDCBP-212ENST00000523483 IRS4O14654 1257 aaPredicted RBP11.63□□□□□ -0.55
SDCBP-212ENST00000523483 TAF7LQ5H9L4 462 aa11.63□□□□□ -0.55
SDCBP-212ENST00000523483 UTP14AQ9BVJ6 771 aaKnown RBP11.63□□□□□ -0.55
SDCBP-212ENST00000523483 PXDNLA1KZ92 1463 aa11.63□□□□□ -0.55
SDCBP-212ENST00000523483 USP42Q9H9J4 1324 aaKnown RBP11.62□□□□□ -0.55
SDCBP-212ENST00000523483 COL23A1Q86Y22 540 aaPredicted RBP11.62□□□□□ -0.55
SDCBP-212ENST00000523483 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
SDCBP-212ENST00000523483 SMARCA5O60264 1052 aaPredicted RBP11.62□□□□□ -0.55
SDCBP-212ENST00000523483 SSFA2P28290 1259 aa11.62□□□□□ -0.55
SDCBP-212ENST00000523483 ZBTB38Q8NAP3 1195 aaPredicted RBP11.62□□□□□ -0.55
SDCBP-212ENST00000523483 SH3TC1Q8TE82 1336 aa11.61□□□□□ -0.55
SDCBP-212ENST00000523483 KAZALD1Q96I82 304 aa11.61□□□□□ -0.55
SDCBP-212ENST00000523483 ATP8B2P98198 1209 aa11.61□□□□□ -0.55
SDCBP-212ENST00000523483 ZNF34Q8IZ26 560 aa11.61□□□□□ -0.55
SDCBP-212ENST00000523483 PDGFDQ9GZP0 370 aaPredicted RBP11.61□□□□□ -0.55
SDCBP-212ENST00000523483 IL1RAPL2Q9NP60 686 aa11.61□□□□□ -0.55
SDCBP-212ENST00000523483 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
SDCBP-212ENST00000523483 HDAC1Q13547 482 aaPredicted RBP11.61□□□□□ -0.55
SDCBP-212ENST00000523483 SLC15A2Q16348 729 aa11.61□□□□□ -0.55
SDCBP-212ENST00000523483 H7C1W4 665 aa11.6□□□□□ -0.55
SDCBP-212ENST00000523483 NFIXQ14938 502 aa11.6□□□□□ -0.55
SDCBP-212ENST00000523483 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
SDCBP-212ENST00000523483 CLEC4GQ6UXB4 293 aa11.6□□□□□ -0.55
SDCBP-212ENST00000523483 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
SDCBP-212ENST00000523483 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
SDCBP-212ENST00000523483 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
SDCBP-212ENST00000523483 PCCAP05165 728 aaPredicted RBP11.6□□□□□ -0.55
SDCBP-212ENST00000523483 GYS1P13807 737 aa11.6□□□□□ -0.55
SDCBP-212ENST00000523483 ERFEQ4G0M1 354 aa11.6□□□□□ -0.55
SDCBP-212ENST00000523483 PARP10Q53GL7 1025 aa11.6□□□□□ -0.55
SDCBP-212ENST00000523483 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
SDCBP-212ENST00000523483 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
SDCBP-212ENST00000523483 ADRA2BP18089 450 aa11.59□□□□□ -0.55
SDCBP-212ENST00000523483 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
SDCBP-212ENST00000523483 AKT1S1Q96B36 256 aa11.59□□□□□ -0.55
SDCBP-212ENST00000523483 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
SDCBP-212ENST00000523483 TPTE2Q6XPS3 522 aa11.59□□□□□ -0.55
SDCBP-212ENST00000523483 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
SDCBP-212ENST00000523483 LY75O60449 1722 aa11.58□□□□□ -0.56
SDCBP-212ENST00000523483 G3BP1Q13283 466 aaKnown RBP eCLIP11.58□□□□□ -0.56
SDCBP-212ENST00000523483 PNPLA7Q6ZV29 1317 aa11.58□□□□□ -0.56
SDCBP-212ENST00000523483 PSDA5PKW4 1024 aaPredicted RBP11.58□□□□□ -0.56
SDCBP-212ENST00000523483 HMGB2P26583 209 aaKnown RBP11.58□□□□□ -0.56
SDCBP-212ENST00000523483 GREM2Q9H772 168 aa11.58□□□□□ -0.56
SDCBP-212ENST00000523483 MMP10P09238 476 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 CASP7P55210 303 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 IFIT5Q13325 482 aaKnown RBP11.57□□□□□ -0.56
SDCBP-212ENST00000523483 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
SDCBP-212ENST00000523483 GCC1Q96CN9 775 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 COL5A3P25940 1745 aaPredicted RBP11.57□□□□□ -0.56
SDCBP-212ENST00000523483 NTSR2O95665 410 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 FOXO4P98177 505 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 PPP1R1BQ9UD71 204 aaPredicted RBP11.57□□□□□ -0.56
SDCBP-212ENST00000523483 AFDNP55196 1824 aaKnown RBP11.57□□□□□ -0.56
SDCBP-212ENST00000523483 CTSWP56202 376 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 R3HDM1Q15032 1099 aaKnown RBP11.57□□□□□ -0.56
SDCBP-212ENST00000523483 CHD1LQ86WJ1 897 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 C16orf71Q8IYS4 520 aaPredicted RBP11.57□□□□□ -0.56
SDCBP-212ENST00000523483 SSH3Q8TE77 659 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 DCTPP1Q9H773 170 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 UTYO14607 1347 aa11.57□□□□□ -0.56
SDCBP-212ENST00000523483 PDE8AO60658 829 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 ZBTB7AO95365 584 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 SERPINB2P05120 415 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 ITGA6P23229 1130 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 TSHZ3Q63HK5 1081 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 SMC5Q8IY18 1101 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 FLAD1Q8NFF5 587 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 ILDR2Q71H61 639 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 LRRCC1Q9C099 1032 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 NYXQ9GZU5 481 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 SEC31BQ9NQW1 1179 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 WWC3Q9ULE0 1092 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 UTRNP46939 3433 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 NLGN1Q8N2Q7 840 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 NLRP3Q96P20 1036 aa11.56□□□□□ -0.56
SDCBP-212ENST00000523483 CNNM1Q9NRU3 951 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms