RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 ALKBH2Q6NS38 261 aa10.79□□□□□ -0.68
CPNE3-206ENST00000523469 FAM13BQ9NYF5 915 aa10.79□□□□□ -0.68
CPNE3-206ENST00000523469 SOWAHDA6NJG2 315 aa10.78□□□□□ -0.68
CPNE3-206ENST00000523469 MX2P20592 715 aa10.78□□□□□ -0.68
CPNE3-206ENST00000523469 ZAP70P43403 619 aa10.78□□□□□ -0.68
CPNE3-206ENST00000523469 EIF1AXP47813 144 aaKnown RBP10.78□□□□□ -0.68
CPNE3-206ENST00000523469 FAM182BQ5T319 152 aa10.78□□□□□ -0.68
CPNE3-206ENST00000523469 LCE2CQ5TA81 110 aa10.78□□□□□ -0.68
CPNE3-206ENST00000523469 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
CPNE3-206ENST00000523469 SFSWAPQ12872 951 aaKnown RBP10.77□□□□□ -0.69
CPNE3-206ENST00000523469 STRN4Q9NRL3 753 aa10.77□□□□□ -0.69
CPNE3-206ENST00000523469 MBIPQ9NS73 344 aa10.77□□□□□ -0.69
CPNE3-206ENST00000523469 HCN2Q9UL51 889 aa10.77□□□□□ -0.69
CPNE3-206ENST00000523469 CD33P20138 364 aa10.76□□□□□ -0.69
CPNE3-206ENST00000523469 GMPRP36959 345 aa10.76□□□□□ -0.69
CPNE3-206ENST00000523469 RNFT1Q5M7Z0 435 aa10.76□□□□□ -0.69
CPNE3-206ENST00000523469 LCE2AQ5TA79 106 aaPredicted RBP10.76□□□□□ -0.69
CPNE3-206ENST00000523469 C11orf16Q9NQ32 467 aa10.76□□□□□ -0.69
CPNE3-206ENST00000523469 NSFL1CQ9UNZ2 370 aaKnown RBP10.76□□□□□ -0.69
CPNE3-206ENST00000523469 CTBSQ01459 385 aa10.75□□□□□ -0.69
CPNE3-206ENST00000523469 RGL4Q8IZJ4 473 aa10.75□□□□□ -0.69
CPNE3-206ENST00000523469 PIK3R5Q8WYR1 880 aa10.75□□□□□ -0.69
CPNE3-206ENST00000523469 RTCBQ9Y3I0 505 aaKnown RBP10.75□□□□□ -0.69
CPNE3-206ENST00000523469 BMP4P12644 408 aa10.74□□□□□ -0.69
CPNE3-206ENST00000523469 KRT76Q01546 638 aa10.74□□□□□ -0.69
CPNE3-206ENST00000523469 ECM1Q16610 540 aa10.74□□□□□ -0.69
CPNE3-206ENST00000523469 GRNP28799 593 aaKnown RBP10.73□□□□□ -0.69
CPNE3-206ENST00000523469 AAMPQ13685 434 aa10.73□□□□□ -0.69
CPNE3-206ENST00000523469 ATCAYQ86WG3 371 aa10.73□□□□□ -0.69
CPNE3-206ENST00000523469 GPR152Q8TDT2 470 aa10.73□□□□□ -0.69
CPNE3-206ENST00000523469 CNTNAP3BQ96NU0 1288 aa10.73□□□□□ -0.69
CPNE3-206ENST00000523469 CNTNAP3Q9BZ76 1288 aa10.73□□□□□ -0.69
CPNE3-206ENST00000523469 MAP2K3P46734 347 aa10.72□□□□□ -0.69
CPNE3-206ENST00000523469 ARHGAP4P98171 946 aa10.72□□□□□ -0.69
CPNE3-206ENST00000523469 SRSF11Q05519 484 aaKnown RBP10.72□□□□□ -0.69
CPNE3-206ENST00000523469 SPEM2Q0P670 501 aa10.72□□□□□ -0.69
CPNE3-206ENST00000523469 CMTR1Q8N1G2 835 aaKnown RBP10.72□□□□□ -0.69
CPNE3-206ENST00000523469 ZBTB7CA1YPR0 619 aa10.71□□□□□ -0.69
CPNE3-206ENST00000523469 C2CD2LO14523 706 aa10.71□□□□□ -0.69
CPNE3-206ENST00000523469 IGF1RP08069 1367 aa10.71□□□□□ -0.69
CPNE3-206ENST00000523469 PCSK2P16519 638 aa10.71□□□□□ -0.69
CPNE3-206ENST00000523469 MZF1P28698 734 aaPredicted RBP10.71□□□□□ -0.69
CPNE3-206ENST00000523469 EFCC1Q9HA90 598 aa10.71□□□□□ -0.69
CPNE3-206ENST00000523469 BIN2Q9UBW5 565 aaPredicted RBP10.71□□□□□ -0.69
CPNE3-206ENST00000523469 USP20Q9Y2K6 914 aa10.71□□□□□ -0.69
CPNE3-206ENST00000523469 RPLP1P05386 114 aaKnown RBP10.7□□□□□ -0.7
CPNE3-206ENST00000523469 DNM1Q05193 864 aaKnown RBP10.7□□□□□ -0.7
CPNE3-206ENST00000523469 CCINQ13939 588 aa10.7□□□□□ -0.7
CPNE3-206ENST00000523469 GRIN2CQ14957 1233 aa10.7□□□□□ -0.7
CPNE3-206ENST00000523469 EDEM1Q92611 657 aa10.7□□□□□ -0.7
CPNE3-206ENST00000523469 SLC30A3Q99726 388 aa10.7□□□□□ -0.7
CPNE3-206ENST00000523469 GSX2Q9BZM3 304 aa10.7□□□□□ -0.7
CPNE3-206ENST00000523469 PRR12Q9ULL5 1215 aa10.7□□□□□ -0.7
CPNE3-206ENST00000523469 FNDC3AQ9Y2H6 1198 aaKnown RBP10.7□□□□□ -0.7
CPNE3-206ENST00000523469 KCNMB2Q9Y691 235 aa10.7□□□□□ -0.7
CPNE3-206ENST00000523469 FZD6O60353 706 aa10.69□□□□□ -0.7
CPNE3-206ENST00000523469 EGFRP00533 1210 aa10.69□□□□□ -0.7
CPNE3-206ENST00000523469 NEUROD1Q13562 356 aa10.69□□□□□ -0.7
CPNE3-206ENST00000523469 NUDT16Q96DE0 195 aaKnown RBP10.69□□□□□ -0.7
CPNE3-206ENST00000523469 AVENQ9NQS1 362 aaPredicted RBP10.69□□□□□ -0.7
CPNE3-206ENST00000523469 XYLBO75191 536 aa10.68□□□□□ -0.7
CPNE3-206ENST00000523469 PDGFAP04085 211 aa10.68□□□□□ -0.7
CPNE3-206ENST00000523469 USP5P45974 858 aa10.68□□□□□ -0.7
CPNE3-206ENST00000523469 SND1Q7KZF4 910 aaKnown RBP eCLIP10.68□□□□□ -0.7
CPNE3-206ENST00000523469 BRPF3Q9ULD4 1205 aa10.68□□□□□ -0.7
CPNE3-206ENST00000523469 POLIQ9UNA4 740 aa10.68□□□□□ -0.7
CPNE3-206ENST00000523469 WIPF1O43516 503 aa10.67□□□□□ -0.7
CPNE3-206ENST00000523469 ADAMTS2O95450 1211 aa10.67□□□□□ -0.7
CPNE3-206ENST00000523469 ARAFP10398 606 aa10.67□□□□□ -0.7
CPNE3-206ENST00000523469 ZNF468Q5VIY5 522 aaPredicted RBP10.67□□□□□ -0.7
CPNE3-206ENST00000523469 PNMA5Q96PV4 448 aa10.67□□□□□ -0.7
CPNE3-206ENST00000523469 CCDC87Q9NVE4 849 aa10.67□□□□□ -0.7
CPNE3-206ENST00000523469 UBAP1LF5GYI3 381 aa10.66□□□□□ -0.7
CPNE3-206ENST00000523469 NDUFB5O43674 189 aa10.66□□□□□ -0.7
CPNE3-206ENST00000523469 SLURP2P0DP57 97 aa10.66□□□□□ -0.7
CPNE3-206ENST00000523469 TRIP4Q15650 581 aaPredicted RBP10.66□□□□□ -0.7
CPNE3-206ENST00000523469 TTC16Q8NEE8 873 aa10.66□□□□□ -0.7
CPNE3-206ENST00000523469 GZF1Q9H116 711 aaPredicted RBP10.66□□□□□ -0.7
CPNE3-206ENST00000523469 BHMTQ93088 406 aa10.65□□□□□ -0.7
CPNE3-206ENST00000523469 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.65□□□□□ -0.7
CPNE3-206ENST00000523469 ADH6P28332 368 aa10.64□□□□□ -0.71
CPNE3-206ENST00000523469 RAB44Q7Z6P3 723 aaPredicted RBP10.64□□□□□ -0.71
CPNE3-206ENST00000523469 SYT9Q86SS6 491 aa10.64□□□□□ -0.71
CPNE3-206ENST00000523469 GJD3Q8N144 294 aa10.64□□□□□ -0.71
CPNE3-206ENST00000523469 CITED4Q96RK1 184 aa10.64□□□□□ -0.71
CPNE3-206ENST00000523469 OXCT2Q9BYC2 517 aaPredicted RBP10.64□□□□□ -0.71
CPNE3-206ENST00000523469 DCTN4Q9UJW0 460 aa10.64□□□□□ -0.71
CPNE3-206ENST00000523469 GDF2Q9UK05 429 aaPredicted RBP10.64□□□□□ -0.71
CPNE3-206ENST00000523469 SIN3BO75182 1162 aa10.63□□□□□ -0.71
CPNE3-206ENST00000523469 SASH3O75995 380 aa10.63□□□□□ -0.71
CPNE3-206ENST00000523469 NFKB1P19838 968 aa10.63□□□□□ -0.71
CPNE3-206ENST00000523469 EHHADHQ08426 723 aa10.63□□□□□ -0.71
CPNE3-206ENST00000523469 C8orf34Q49A92 452 aa10.63□□□□□ -0.71
CPNE3-206ENST00000523469 PDE12Q6L8Q7 609 aaKnown RBP10.63□□□□□ -0.71
CPNE3-206ENST00000523469 GOLGA6L1Q8N7Z2 621 aa10.63□□□□□ -0.71
CPNE3-206ENST00000523469 MAP3K6O95382 1288 aa10.62□□□□□ -0.71
CPNE3-206ENST00000523469 TARSP26639 723 aaKnown RBP10.62□□□□□ -0.71
CPNE3-206ENST00000523469 PCBP4P57723 403 aaKnown RBP10.62□□□□□ -0.71
CPNE3-206ENST00000523469 XKR5Q6UX68 686 aa10.62□□□□□ -0.71
CPNE3-206ENST00000523469 KRT25Q7Z3Z0 450 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms