RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 C7orf43Q8WVR3 580 aa21.08■□□□□ 0.97
CLN8-206ENST00000523237 DBF4Q9UBU7 674 aaPredicted RBP21.08■□□□□ 0.97
CLN8-206ENST00000523237 C16orf71Q8IYS4 520 aaPredicted RBP21.07■□□□□ 0.96
CLN8-206ENST00000523237 MRS2Q9HD23 443 aa21.07■□□□□ 0.96
CLN8-206ENST00000523237 GLTPD2A6NH11 291 aa21.06■□□□□ 0.96
CLN8-206ENST00000523237 RPGRQ92834 1020 aaKnown RBP21.06■□□□□ 0.96
CLN8-206ENST00000523237 UTP14AQ9BVJ6 771 aaKnown RBP21.06■□□□□ 0.96
CLN8-206ENST00000523237 RRAGCQ9HB90 399 aa21.05■□□□□ 0.96
CLN8-206ENST00000523237 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
CLN8-206ENST00000523237 HSPA6P17066 643 aa21.04■□□□□ 0.96
CLN8-206ENST00000523237 TCIRG1Q13488 830 aa21.04■□□□□ 0.96
CLN8-206ENST00000523237 HYPKQ9NX55 129 aa21.04■□□□□ 0.96
CLN8-206ENST00000523237 HOXA10P31260 410 aaPredicted RBP21.03■□□□□ 0.96
CLN8-206ENST00000523237 DPY19L2Q6NUT2 758 aa21.03■□□□□ 0.96
CLN8-206ENST00000523237 RTKN2Q8IZC4 609 aa21.03■□□□□ 0.96
CLN8-206ENST00000523237 PLBD2Q8NHP8 589 aa21.03■□□□□ 0.96
CLN8-206ENST00000523237 NLRP3Q96P20 1036 aa21.03■□□□□ 0.96
CLN8-206ENST00000523237 FKBP4Q02790 459 aaKnown RBP eCLIP21.02■□□□□ 0.96
CLN8-206ENST00000523237 CCDC27Q2M243 656 aa21.02■□□□□ 0.96
CLN8-206ENST00000523237 ANKRD13DQ6ZTN6 518 aa21.02■□□□□ 0.96
CLN8-206ENST00000523237 NLRP10Q86W26 655 aa21.02■□□□□ 0.96
CLN8-206ENST00000523237 RBM46Q8TBY0 533 aaKnown RBP21.02■□□□□ 0.96
CLN8-206ENST00000523237 RBM17Q96I25 401 aaKnown RBP21.02■□□□□ 0.96
CLN8-206ENST00000523237 LAMB2P55268 1798 aa21.02■□□□□ 0.96
CLN8-206ENST00000523237 ELL2O00472 640 aaPredicted RBP21.01■□□□□ 0.95
CLN8-206ENST00000523237 SLC10A5Q5PT55 438 aa21.01■□□□□ 0.95
CLN8-206ENST00000523237 VEGFAP15692 232 aaPredicted RBP21■□□□□ 0.95
CLN8-206ENST00000523237 OLFM4Q6UX06 510 aa21■□□□□ 0.95
CLN8-206ENST00000523237 CRAMP1Q96RY5 1269 aa21■□□□□ 0.95
CLN8-206ENST00000523237 CHMP4AQ9BY43 222 aa21■□□□□ 0.95
CLN8-206ENST00000523237 WDR90Q96KV7 1748 aa21■□□□□ 0.95
CLN8-206ENST00000523237 CC2D2BQ6DHV5 1058 aa20.99■□□□□ 0.95
CLN8-206ENST00000523237 WWC1Q8IX03 1113 aa20.99■□□□□ 0.95
CLN8-206ENST00000523237 TRMT112Q9UI30 125 aaKnown RBP20.99■□□□□ 0.95
CLN8-206ENST00000523237 SH3TC1Q8TE82 1336 aa20.99■□□□□ 0.95
CLN8-206ENST00000523237 NCBP3Q53F19 620 aaKnown RBP20.98■□□□□ 0.95
CLN8-206ENST00000523237 C3orf67Q6ZVT6 689 aa20.98■□□□□ 0.95
CLN8-206ENST00000523237 C8orf58Q8NAV2 365 aa20.98■□□□□ 0.95
CLN8-206ENST00000523237 FSTL1Q12841 308 aa20.97■□□□□ 0.95
CLN8-206ENST00000523237 GRIPAP1Q4V328 841 aa20.97■□□□□ 0.95
CLN8-206ENST00000523237 ZNF277Q9NRM2 450 aaPredicted RBP20.97■□□□□ 0.95
CLN8-206ENST00000523237 SNED1Q8TER0 1413 aa20.96■□□□□ 0.95
CLN8-206ENST00000523237 PPEF1O14829 653 aaPredicted RBP20.96■□□□□ 0.95
CLN8-206ENST00000523237 GOLGA2Q08379 1002 aa20.96■□□□□ 0.95
CLN8-206ENST00000523237 CCDC30Q5VVM6 783 aa20.96■□□□□ 0.95
CLN8-206ENST00000523237 SYNE4Q8N205 404 aa20.96■□□□□ 0.95
CLN8-206ENST00000523237 PSMD1Q99460 953 aa20.96■□□□□ 0.95
CLN8-206ENST00000523237 DDX60Q8IY21 1712 aaKnown RBP20.95■□□□□ 0.94
CLN8-206ENST00000523237 HCLS1P14317 486 aaPredicted RBP20.95■□□□□ 0.94
CLN8-206ENST00000523237 RIC3Q7Z5B4 369 aa20.95■□□□□ 0.94
CLN8-206ENST00000523237 TSR2Q969E8 191 aaKnown RBP20.95■□□□□ 0.94
CLN8-206ENST00000523237 ISCA1Q9BUE6 129 aa20.95■□□□□ 0.94
CLN8-206ENST00000523237 PHAXQ9H814 394 aaKnown RBP20.95■□□□□ 0.94
CLN8-206ENST00000523237 IL16Q14005 1332 aa20.95■□□□□ 0.94
CLN8-206ENST00000523237 ATP5J2-PTCD1G3V325 749 aa20.94■□□□□ 0.94
CLN8-206ENST00000523237 IARSP41252 1262 aaKnown RBP20.94■□□□□ 0.94
CLN8-206ENST00000523237 APLP1P51693 650 aa20.94■□□□□ 0.94
CLN8-206ENST00000523237 SMC1BQ8NDV3 1235 aa20.94■□□□□ 0.94
CLN8-206ENST00000523237 TMX4Q9H1E5 349 aaPredicted RBP20.94■□□□□ 0.94
CLN8-206ENST00000523237 CEP350Q5VT06 3117 aa20.93■□□□□ 0.94
CLN8-206ENST00000523237 POTECB2RU33 542 aa20.93■□□□□ 0.94
CLN8-206ENST00000523237 TCERG1O14776 1098 aaKnown RBP20.93■□□□□ 0.94
CLN8-206ENST00000523237 DDNO94850 711 aaPredicted RBP20.93■□□□□ 0.94
CLN8-206ENST00000523237 TRIM28Q13263 835 aaKnown RBP20.93■□□□□ 0.94
CLN8-206ENST00000523237 TSPYL6Q8N831 410 aa20.93■□□□□ 0.94
CLN8-206ENST00000523237 ABCC4O15439 1325 aa20.93■□□□□ 0.94
CLN8-206ENST00000523237 ZNF428Q96B54 188 aa20.92■□□□□ 0.94
CLN8-206ENST00000523237 SCN4AP35499 1836 aa20.92■□□□□ 0.94
CLN8-206ENST00000523237 DDX58O95786 925 aaKnown RBP20.91■□□□□ 0.94
CLN8-206ENST00000523237 DDX46Q7L014 1031 aaKnown RBP20.91■□□□□ 0.94
CLN8-206ENST00000523237 JDP2Q8WYK2 163 aa20.91■□□□□ 0.94
CLN8-206ENST00000523237 FAM89AQ96GI7 184 aa20.91■□□□□ 0.94
CLN8-206ENST00000523237 ATP6V0A2Q9Y487 856 aa20.91■□□□□ 0.94
CLN8-206ENST00000523237 TAF1P21675 1872 aa20.9■□□□□ 0.94
CLN8-206ENST00000523237 BBOX1O75936 387 aa20.9■□□□□ 0.94
CLN8-206ENST00000523237 TWISTNBQ3B726 338 aaPredicted RBP20.9■□□□□ 0.94
CLN8-206ENST00000523237 STK31Q9BXU1 1019 aa20.9■□□□□ 0.94
CLN8-206ENST00000523237 FZD9O00144 591 aa20.89■□□□□ 0.93
CLN8-206ENST00000523237 WDR63Q8IWG1 891 aa20.89■□□□□ 0.93
CLN8-206ENST00000523237 FAM9BQ8IZU0 186 aa20.89■□□□□ 0.93
CLN8-206ENST00000523237 SALL2Q9Y467 1007 aaPredicted RBP20.89■□□□□ 0.93
CLN8-206ENST00000523237 ZNF541Q9H0D2 1346 aa20.88■□□□□ 0.93
CLN8-206ENST00000523237 IQCA1LA6NCM1 817 aa20.88■□□□□ 0.93
CLN8-206ENST00000523237 GRAPQ13588 217 aa20.88■□□□□ 0.93
CLN8-206ENST00000523237 GRAPLQ8TC17 118 aaPredicted RBP20.88■□□□□ 0.93
CLN8-206ENST00000523237 L3MBTL3Q96JM7 780 aaPredicted RBP20.88■□□□□ 0.93
CLN8-206ENST00000523237 MYD88Q99836 296 aa20.88■□□□□ 0.93
CLN8-206ENST00000523237 CACNA1FO60840 1977 aa20.87■□□□□ 0.93
CLN8-206ENST00000523237 RTL5Q5HYW3 569 aaPredicted RBP20.87■□□□□ 0.93
CLN8-206ENST00000523237 SLC51AQ86UW1 340 aa20.87■□□□□ 0.93
CLN8-206ENST00000523237 SP8Q8IXZ3 490 aa20.87■□□□□ 0.93
CLN8-206ENST00000523237 LARGE2Q8N3Y3 721 aa20.87■□□□□ 0.93
CLN8-206ENST00000523237 ZBTB38Q8NAP3 1195 aaPredicted RBP20.87■□□□□ 0.93
CLN8-206ENST00000523237 FANCIQ9NVI1 1328 aa20.86■□□□□ 0.93
CLN8-206ENST00000523237 IRS4O14654 1257 aaPredicted RBP20.86■□□□□ 0.93
CLN8-206ENST00000523237 HSP90B1P14625 803 aaKnown RBP20.86■□□□□ 0.93
CLN8-206ENST00000523237 SF3B3Q15393 1217 aaKnown RBP20.86■□□□□ 0.93
CLN8-206ENST00000523237 TMC4Q7Z404 712 aa20.86■□□□□ 0.93
CLN8-206ENST00000523237 CCDC191Q8NCU4 936 aa20.86■□□□□ 0.93
CLN8-206ENST00000523237 SUPT20HQ8NEM7 779 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms