RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 BRIP1Q9BX63 1249 aa13.54□□□□□ -0.24
DENND3-220ENST00000523066 LAMB2P55268 1798 aa13.53□□□□□ -0.24
DENND3-220ENST00000523066 SLX4Q8IY92 1834 aa13.53□□□□□ -0.24
DENND3-220ENST00000523066 CACNA1FO60840 1977 aa13.53□□□□□ -0.24
DENND3-220ENST00000523066 ATP5J2-PTCD1G3V325 749 aa13.53□□□□□ -0.24
DENND3-220ENST00000523066 NTSR2O95665 410 aa13.53□□□□□ -0.24
DENND3-220ENST00000523066 TCIRG1Q13488 830 aa13.53□□□□□ -0.24
DENND3-220ENST00000523066 TPTE2Q6XPS3 522 aa13.53□□□□□ -0.24
DENND3-220ENST00000523066 SYNE4Q8N205 404 aa13.53□□□□□ -0.24
DENND3-220ENST00000523066 MYH16Q9H6N6 1097 aa13.53□□□□□ -0.24
DENND3-220ENST00000523066 PIM2Q9P1W9 311 aa13.53□□□□□ -0.24
DENND3-220ENST00000523066 GTF2E1P29083 439 aaPredicted RBP13.52□□□□□ -0.25
DENND3-220ENST00000523066 SLFN5Q08AF3 891 aa13.52□□□□□ -0.25
DENND3-220ENST00000523066 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.25
DENND3-220ENST00000523066 NLRP10Q86W26 655 aa13.52□□□□□ -0.25
DENND3-220ENST00000523066 ZNF622Q969S3 477 aaKnown RBP eCLIP13.52□□□□□ -0.25
DENND3-220ENST00000523066 DDX60Q8IY21 1712 aaKnown RBP13.51□□□□□ -0.25
DENND3-220ENST00000523066 H0YIN7 160 aa13.51□□□□□ -0.25
DENND3-220ENST00000523066 GRIN3BO60391 1043 aa13.51□□□□□ -0.25
DENND3-220ENST00000523066 PDE6BP35913 854 aa13.51□□□□□ -0.25
DENND3-220ENST00000523066 DALRD3Q5D0E6 543 aaKnown RBP13.51□□□□□ -0.25
DENND3-220ENST00000523066 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
DENND3-220ENST00000523066 STK31Q9BXU1 1019 aa13.51□□□□□ -0.25
DENND3-220ENST00000523066 FBXO3Q9UK99 471 aa13.51□□□□□ -0.25
DENND3-220ENST00000523066 TAF1P21675 1872 aa13.5□□□□□ -0.25
DENND3-220ENST00000523066 CCDC88AQ3V6T2 1871 aa13.5□□□□□ -0.25
DENND3-220ENST00000523066 SRGNP10124 158 aa13.5□□□□□ -0.25
DENND3-220ENST00000523066 YY1P25490 414 aa13.5□□□□□ -0.25
DENND3-220ENST00000523066 PARP10Q53GL7 1025 aa13.5□□□□□ -0.25
DENND3-220ENST00000523066 HSP90AB3PQ58FF7 597 aa13.5□□□□□ -0.25
DENND3-220ENST00000523066 PPP1R42Q7Z4L9 355 aa13.5□□□□□ -0.25
DENND3-220ENST00000523066 MYD88Q99836 296 aa13.5□□□□□ -0.25
DENND3-220ENST00000523066 ISCA1Q9BUE6 129 aa13.5□□□□□ -0.25
DENND3-220ENST00000523066 UTP14AQ9BVJ6 771 aaKnown RBP13.5□□□□□ -0.25
DENND3-220ENST00000523066 NYXQ9GZU5 481 aa13.5□□□□□ -0.25
DENND3-220ENST00000523066 ADCY9O60503 1353 aa13.49□□□□□ -0.25
DENND3-220ENST00000523066 SBF1O95248 1867 aa13.49□□□□□ -0.25
DENND3-220ENST00000523066 PI4KAP2A4QPH2 592 aa13.49□□□□□ -0.25
DENND3-220ENST00000523066 E9PSI1 815 aa13.49□□□□□ -0.25
DENND3-220ENST00000523066 RTL5Q5HYW3 569 aaPredicted RBP13.49□□□□□ -0.25
DENND3-220ENST00000523066 ARHGAP27Q6ZUM4 889 aa13.49□□□□□ -0.25
DENND3-220ENST00000523066 PI4KAP1Q8N8J0 262 aa13.49□□□□□ -0.25
DENND3-220ENST00000523066 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
DENND3-220ENST00000523066 MAP3K2Q9Y2U5 619 aa13.49□□□□□ -0.25
DENND3-220ENST00000523066 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
DENND3-220ENST00000523066 IBTKQ9P2D0 1353 aaPredicted RBP13.48□□□□□ -0.25
DENND3-220ENST00000523066 HCLS1P14317 486 aaPredicted RBP13.48□□□□□ -0.25
DENND3-220ENST00000523066 HNRNPUQ00839 825 aaKnown RBP eCLIP13.48□□□□□ -0.25
DENND3-220ENST00000523066 FLIIQ13045 1269 aa13.48□□□□□ -0.25
DENND3-220ENST00000523066 SLC51AQ86UW1 340 aa13.48□□□□□ -0.25
DENND3-220ENST00000523066 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
DENND3-220ENST00000523066 TRMT112Q9UI30 125 aaKnown RBP13.48□□□□□ -0.25
DENND3-220ENST00000523066 UTRNP46939 3433 aa13.48□□□□□ -0.25
DENND3-220ENST00000523066 KLRG2A4D1S0 409 aaPredicted RBP13.47□□□□□ -0.25
DENND3-220ENST00000523066 CACNB1Q02641 598 aaPredicted RBP13.47□□□□□ -0.25
DENND3-220ENST00000523066 KSR2Q6VAB6 950 aa13.47□□□□□ -0.25
DENND3-220ENST00000523066 TRMT2AQ8IZ69 625 aaKnown RBP13.47□□□□□ -0.25
DENND3-220ENST00000523066 FAM89AQ96GI7 184 aa13.47□□□□□ -0.25
DENND3-220ENST00000523066 MASTLQ96GX5 879 aa13.47□□□□□ -0.25
DENND3-220ENST00000523066 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
DENND3-220ENST00000523066 FER1L6Q2WGJ9 1857 aa13.46□□□□□ -0.25
DENND3-220ENST00000523066 C21orf2O43822 256 aa13.46□□□□□ -0.25
DENND3-220ENST00000523066 DDX58O95786 925 aaKnown RBP13.46□□□□□ -0.25
DENND3-220ENST00000523066 NPR1P16066 1061 aa13.46□□□□□ -0.25
DENND3-220ENST00000523066 RASSF7Q02833 373 aa13.46□□□□□ -0.25
DENND3-220ENST00000523066 STYK1Q6J9G0 422 aa13.46□□□□□ -0.25
DENND3-220ENST00000523066 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.25
DENND3-220ENST00000523066 OLFM4Q6UX06 510 aa13.46□□□□□ -0.25
DENND3-220ENST00000523066 CHMP4AQ9BY43 222 aa13.46□□□□□ -0.25
DENND3-220ENST00000523066 SH3TC1Q8TE82 1336 aa13.45□□□□□ -0.26
DENND3-220ENST00000523066 COL4A1P02462 1669 aa13.45□□□□□ -0.26
DENND3-220ENST00000523066 F6X3S4 739 aa13.45□□□□□ -0.26
DENND3-220ENST00000523066 IGKV5-2P06315 115 aa13.45□□□□□ -0.26
DENND3-220ENST00000523066 PRELPP51888 382 aa13.45□□□□□ -0.26
DENND3-220ENST00000523066 FKBP5Q13451 457 aaPredicted RBP13.45□□□□□ -0.26
DENND3-220ENST00000523066 CWF19L2Q2TBE0 894 aaKnown RBP13.45□□□□□ -0.26
DENND3-220ENST00000523066 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
DENND3-220ENST00000523066 SLC10A5Q5PT55 438 aa13.45□□□□□ -0.26
DENND3-220ENST00000523066 BCL2L13Q9BXK5 485 aa13.45□□□□□ -0.26
DENND3-220ENST00000523066 PDZRN3Q9UPQ7 1066 aa13.45□□□□□ -0.26
DENND3-220ENST00000523066 RIC1Q4ADV7 1423 aa13.45□□□□□ -0.26
DENND3-220ENST00000523066 TRIM28Q13263 835 aaKnown RBP13.44□□□□□ -0.26
DENND3-220ENST00000523066 CNKSR1Q969H4 720 aa13.44□□□□□ -0.26
DENND3-220ENST00000523066 NFKBIEO00221 500 aa13.43□□□□□ -0.26
DENND3-220ENST00000523066 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
DENND3-220ENST00000523066 DNAAF4Q8WXU2 420 aa13.43□□□□□ -0.26
DENND3-220ENST00000523066 SSH1Q8WYL5 1049 aa13.43□□□□□ -0.26
DENND3-220ENST00000523066 RPGRQ92834 1020 aaKnown RBP13.43□□□□□ -0.26
DENND3-220ENST00000523066 NLRP3Q96P20 1036 aa13.43□□□□□ -0.26
DENND3-220ENST00000523066 NEURL1BA8MQ27 555 aa13.42□□□□□ -0.26
DENND3-220ENST00000523066 CCDC191Q8NCU4 936 aa13.42□□□□□ -0.26
DENND3-220ENST00000523066 C7orf43Q8WVR3 580 aa13.42□□□□□ -0.26
DENND3-220ENST00000523066 CWC25Q9NXE8 425 aaPredicted RBP13.42□□□□□ -0.26
DENND3-220ENST00000523066 RNF123Q5XPI4 1314 aa13.41□□□□□ -0.26
DENND3-220ENST00000523066 MYH3P11055 1940 aa13.41□□□□□ -0.26
DENND3-220ENST00000523066 IRS4O14654 1257 aaPredicted RBP13.41□□□□□ -0.26
DENND3-220ENST00000523066 C9orf131Q5VYM1 1079 aa13.41□□□□□ -0.26
DENND3-220ENST00000523066 ZBTB38Q8NAP3 1195 aaPredicted RBP13.41□□□□□ -0.26
DENND3-220ENST00000523066 ZNF784Q8NCA9 323 aaPredicted RBP13.41□□□□□ -0.26
DENND3-220ENST00000523066 ABCC4O15439 1325 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms