RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 LRFN2Q9ULH4 789 aa8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 KCNH4Q9UQ05 1017 aa8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 EPXP11678 715 aa8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 ADH6P28332 368 aa8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 SNRPNP63162 240 aaKnown RBP8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 HIF1AQ16665 826 aa8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 SYT9Q86SS6 491 aa8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 BTBD6Q96KE9 485 aa8.52□□□□□ -1.05
HMGB1P1-201ENST00000522557 TGFBR3LH3BV60 316 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 BRD1O95696 1058 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 IRS1P35568 1242 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 KCNQ4P56696 695 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 PDE4CQ08493 712 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 COX20Q5RI15 118 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 RAB44Q7Z6P3 723 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 CLP1Q92989 425 aaKnown RBP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 SCARF2Q96GP6 870 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 MYO19Q96H55 970 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 SAP130Q9H0E3 1048 aa8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 AVENQ9NQS1 362 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 CXXC1Q9P0U4 656 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P1-201ENST00000522557 IER5Q5VY09 327 aa8.5□□□□□ -1.05
HMGB1P1-201ENST00000522557 MKNK1Q9BUB5 465 aa8.5□□□□□ -1.05
HMGB1P1-201ENST00000522557 HOXB4P17483 251 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 AMPD1P23109 780 aa8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 GRNP28799 593 aaKnown RBP8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 RASSF7Q02833 373 aa8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 BEND7Q8N7W2 519 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 RRAGCQ9HB90 399 aa8.49□□□□□ -1.05
HMGB1P1-201ENST00000522557 CARNS1A5YM72 827 aa8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 MICAL2O94851 1124 aa8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 IDH3AP50213 366 aa8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 KCNA1Q09470 495 aa8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 NAA30Q147X3 362 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 IFT43Q96FT9 208 aa8.48□□□□□ -1.05
HMGB1P1-201ENST00000522557 RNF225M0QZC1 329 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 OPLAHO14841 1288 aa8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 ATP2B4P23634 1241 aa8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 INPP5BP32019 993 aa8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 BHMTQ93088 406 aa8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
HMGB1P1-201ENST00000522557 SIN3BO75182 1162 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 FAM26DQ5JW98 314 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 CHSY3Q70JA7 882 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 PODNQ7Z5L7 613 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 TMEM151AQ8N4L1 468 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 MDFIQ99750 246 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 USP20Q9Y2K6 914 aa8.46□□□□□ -1.06
HMGB1P1-201ENST00000522557 GDF11O95390 407 aa8.45□□□□□ -1.06
HMGB1P1-201ENST00000522557 SCNN1AP37088 669 aa8.45□□□□□ -1.06
HMGB1P1-201ENST00000522557 C16orf46Q6P387 395 aa8.45□□□□□ -1.06
HMGB1P1-201ENST00000522557 LINC00114Q6XXX2 140 aa8.45□□□□□ -1.06
HMGB1P1-201ENST00000522557 COL26A1Q96A83 441 aa8.45□□□□□ -1.06
HMGB1P1-201ENST00000522557 ELOA3CA0A087WX78 387 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 ELOA3DA6NLF2 546 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 PHF20L1A8MW92 1017 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 ELOA3BQ3SY89 546 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 PHLDB3Q6NSJ2 640 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 TREML1Q86YW5 311 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 AEBP1Q8IUX7 1158 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 ELOA3Q8NG57 546 aa8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 GNEQ9Y223 722 aaKnown RBP8.44□□□□□ -1.06
HMGB1P1-201ENST00000522557 ADARB2-AS1A8MUL3 147 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 PATL2C9JE40 543 aaKnown RBP8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 ARSDP51689 593 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 CCINQ13939 588 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 KANK3Q6NY19 840 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 ETFBKMTQ8IXQ9 262 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 TNFRSF25Q93038 417 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 IGFLR1Q9H665 355 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 SEPT3Q9UH03 358 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 MKL2Q9ULH7 1088 aa8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 CCDC9Q9Y3X0 531 aaKnown RBP8.43□□□□□ -1.06
HMGB1P1-201ENST00000522557 TNFRSF10BO14763 440 aa8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 PTCD1O75127 700 aaKnown RBP8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 ALAS2P22557 587 aa8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 DGKGP49619 791 aa8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 SUV39H2Q9H5I1 410 aa8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 RTCBQ9Y3I0 505 aaKnown RBP8.42□□□□□ -1.06
HMGB1P1-201ENST00000522557 EPB42P16452 691 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 NFKB1P19838 968 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 BRD2P25440 801 aaKnown RBP8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 TARSP26639 723 aaKnown RBP8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 TBC1D8BQ0IIM8 1120 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 KRT25Q7Z3Z0 450 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 RGL4Q8IZJ4 473 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 RGS22Q8NE09 1264 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 PNMA5Q96PV4 448 aa8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P1-201ENST00000522557 ZBTB39O15060 712 aa8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 SASH3O75995 380 aa8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 SSFA2P28290 1259 aa8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 ADH7P40394 386 aa8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 CMTR1Q8N1G2 835 aaKnown RBP8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 ZFATQ9P243 1243 aa8.4□□□□□ -1.06
HMGB1P1-201ENST00000522557 STARD13Q9Y3M8 1113 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms