RNA–Protein interactions for RNA: ENST00000522411.5

LSS-211, Transcript of lanosterol synthase, humanhuman

TSL 2 BASIC

Gene LSS, Length 2,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-211ENST00000522411 AACSQ86V21 672 aa17.12■□□□□ 0.33
LSS-211ENST00000522411 SH2B1Q9NRF2 756 aaPredicted RBP17.12■□□□□ 0.33
LSS-211ENST00000522411 MAP3K2Q9Y2U5 619 aa17.12■□□□□ 0.33
LSS-211ENST00000522411 RBM8AQ9Y5S9 174 aaKnown RBP17.12■□□□□ 0.33
LSS-211ENST00000522411 CWF19L2Q2TBE0 894 aaKnown RBP17.11■□□□□ 0.33
LSS-211ENST00000522411 LARP1BQ659C4 914 aaKnown RBP17.11■□□□□ 0.33
LSS-211ENST00000522411 AEBP2Q6ZN18 517 aaPredicted RBP17.11■□□□□ 0.33
LSS-211ENST00000522411 TCEANC2Q96MN5 208 aa17.11■□□□□ 0.33
LSS-211ENST00000522411 TM6SF1Q9BZW5 370 aa17.11■□□□□ 0.33
LSS-211ENST00000522411 CCDC171Q6TFL3 1326 aa17.11■□□□□ 0.33
LSS-211ENST00000522411 KCNJ4P48050 445 aa17.11■□□□□ 0.33
LSS-211ENST00000522411 PROSER3Q2NL68 480 aa17.11■□□□□ 0.33
LSS-211ENST00000522411 CREB3L3Q68CJ9 461 aa17.11■□□□□ 0.33
LSS-211ENST00000522411 KCNB2Q92953 911 aa17.11■□□□□ 0.33
LSS-211ENST00000522411 PRIMPOLQ96LW4 560 aa17.11■□□□□ 0.33
LSS-211ENST00000522411 ZKSCAN1P17029 563 aaPredicted RBP17.1■□□□□ 0.33
LSS-211ENST00000522411 TEFQ10587 303 aa17.1■□□□□ 0.33
LSS-211ENST00000522411 MTX1Q13505 466 aa17.1■□□□□ 0.33
LSS-211ENST00000522411 CAMK4Q16566 473 aa17.1■□□□□ 0.33
LSS-211ENST00000522411 TTC6Q86TZ1 520 aa17.1■□□□□ 0.33
LSS-211ENST00000522411 EVI5LQ96CN4 794 aa17.1■□□□□ 0.33
LSS-211ENST00000522411 KCNF1Q9H3M0 494 aa17.1■□□□□ 0.33
LSS-211ENST00000522411 SPTLC3Q9NUV7 552 aa17.1■□□□□ 0.33
LSS-211ENST00000522411 C1orf167Q5SNV9 1468 aa17.1■□□□□ 0.33
LSS-211ENST00000522411 HOXB7P09629 217 aa17.1■□□□□ 0.33
LSS-211ENST00000522411 PYCARDQ9ULZ3 195 aa17.1■□□□□ 0.33
LSS-211ENST00000522411 NMIQ13287 307 aaPredicted RBP17.09■□□□□ 0.33
LSS-211ENST00000522411 CDC37L1Q7L3B6 337 aa17.09■□□□□ 0.33
LSS-211ENST00000522411 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
LSS-211ENST00000522411 ZNF710Q8N1W2 664 aa17.09■□□□□ 0.33
LSS-211ENST00000522411 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
LSS-211ENST00000522411 CCDC8Q9H0W5 538 aaPredicted RBP17.09■□□□□ 0.33
LSS-211ENST00000522411 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
LSS-211ENST00000522411 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.33
LSS-211ENST00000522411 CCDC192P0DO97 292 aa17.08■□□□□ 0.33
LSS-211ENST00000522411 LIG1P18858 919 aa17.08■□□□□ 0.33
LSS-211ENST00000522411 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.33
LSS-211ENST00000522411 MAP4K1Q92918 833 aa17.08■□□□□ 0.33
LSS-211ENST00000522411 LRRC59Q96AG4 307 aaKnown RBP17.08■□□□□ 0.33
LSS-211ENST00000522411 DBF4Q9UBU7 674 aaPredicted RBP17.08■□□□□ 0.33
LSS-211ENST00000522411 TAF6LQ9Y6J9 622 aa17.08■□□□□ 0.33
LSS-211ENST00000522411 CRYBG1Q9Y4K1 1723 aa17.08■□□□□ 0.32
LSS-211ENST00000522411 SASH1O94885 1247 aa17.08■□□□□ 0.32
LSS-211ENST00000522411 KRT28Q7Z3Y7 464 aa17.08■□□□□ 0.32
LSS-211ENST00000522411 KIAA1524Q8TCG1 905 aa17.08■□□□□ 0.32
LSS-211ENST00000522411 IP6K1Q92551 441 aa17.08■□□□□ 0.32
LSS-211ENST00000522411 EAF2Q96CJ1 260 aaPredicted RBP17.08■□□□□ 0.32
LSS-211ENST00000522411 MST1RQ04912 1400 aa17.07■□□□□ 0.32
LSS-211ENST00000522411 SLC27A2O14975 620 aa17.07■□□□□ 0.32
LSS-211ENST00000522411 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
LSS-211ENST00000522411 KRT85P78386 507 aa17.07■□□□□ 0.32
LSS-211ENST00000522411 TLR7Q9NYK1 1049 aaKnown RBP17.07■□□□□ 0.32
LSS-211ENST00000522411 SLAIN2Q9P270 581 aa17.07■□□□□ 0.32
LSS-211ENST00000522411 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
LSS-211ENST00000522411 ERC1Q8IUD2 1116 aa17.06■□□□□ 0.32
LSS-211ENST00000522411 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
LSS-211ENST00000522411 BOLA2Q9H3K6 86 aa17.06■□□□□ 0.32
LSS-211ENST00000522411 A0A0D9SFI3 127 aa17.06■□□□□ 0.32
LSS-211ENST00000522411 GTF2F1P35269 517 aaKnown RBP eCLIP17.06■□□□□ 0.321e-7■■■□□ 15.6
LSS-211ENST00000522411 KSR2Q6VAB6 950 aa17.06■□□□□ 0.32
LSS-211ENST00000522411 LUZP1Q86V48 1076 aa17.06■□□□□ 0.32
LSS-211ENST00000522411 SUCLG2Q96I99 432 aa17.06■□□□□ 0.32
LSS-211ENST00000522411 RGPD2P0DJD1 1756 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 ALDH1L1O75891 902 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 STK3Q13188 491 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 KAZALD1Q96I82 304 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 SIL1Q9H173 461 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 NUP62CLQ9H1M0 184 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 MRVI1Q9Y6F6 885 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 MAP3K11Q16584 847 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 AKAP4Q5JQC9 854 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 CCDC94Q9BW85 323 aaPredicted RBP17.05■□□□□ 0.32
LSS-211ENST00000522411 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 KIF3AQ9Y496 699 aa17.05■□□□□ 0.32
LSS-211ENST00000522411 PSMA5P28066 241 aa17.04■□□□□ 0.32
LSS-211ENST00000522411 AIMP1Q12904 312 aaKnown RBP17.04■□□□□ 0.32
LSS-211ENST00000522411 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
LSS-211ENST00000522411 FAM200AQ8TCP9 573 aa17.04■□□□□ 0.32
LSS-211ENST00000522411 BICC1Q9H694 974 aaKnown RBP17.04■□□□□ 0.32
LSS-211ENST00000522411 PRDM10Q9NQV6 1147 aa17.04■□□□□ 0.32
LSS-211ENST00000522411 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
LSS-211ENST00000522411 NFAT5O94916 1531 aa17.04■□□□□ 0.32
LSS-211ENST00000522411 GIGYF1O75420 1035 aaPredicted RBP17.04■□□□□ 0.32
LSS-211ENST00000522411 TYRO3Q06418 890 aa17.04■□□□□ 0.32
LSS-211ENST00000522411 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
LSS-211ENST00000522411 BLOC1S2Q6QNY1 142 aa17.04■□□□□ 0.32
LSS-211ENST00000522411 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
LSS-211ENST00000522411 KLHDC4Q8TBB5 520 aa17.04■□□□□ 0.32
LSS-211ENST00000522411 DACT1Q9NYF0 836 aa17.04■□□□□ 0.32
LSS-211ENST00000522411 KDM3BQ7LBC6 1761 aa17.03■□□□□ 0.32
LSS-211ENST00000522411 PTGS1P23219 599 aa17.03■□□□□ 0.32
LSS-211ENST00000522411 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
LSS-211ENST00000522411 RNMTO43148 476 aaKnown RBP17.03■□□□□ 0.32
LSS-211ENST00000522411 TOB2Q14106 344 aaPredicted RBP17.03■□□□□ 0.32
LSS-211ENST00000522411 PRDM4Q9UKN5 801 aa17.03■□□□□ 0.32
LSS-211ENST00000522411 GRM8O00222 908 aa17.02■□□□□ 0.32
LSS-211ENST00000522411 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
LSS-211ENST00000522411 CABLES1Q8TDN4 633 aa17.02■□□□□ 0.32
LSS-211ENST00000522411 BCL2L12Q9HB09 334 aa17.02■□□□□ 0.32
LSS-211ENST00000522411 GOLGA6L4A6NEF3 574 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms