RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 WDR63Q8IWG1 891 aa8.73□□□□□ -1.01
SPIDR-218ENST00000522222 BRIP1Q9BX63 1249 aa8.73□□□□□ -1.01
SPIDR-218ENST00000522222 PIM2Q9P1W9 311 aa8.73□□□□□ -1.01
SPIDR-218ENST00000522222 DBF4Q9UBU7 674 aaPredicted RBP8.73□□□□□ -1.01
SPIDR-218ENST00000522222 NTSR2O95665 410 aa8.72□□□□□ -1.01
SPIDR-218ENST00000522222 PDE6BP35913 854 aa8.72□□□□□ -1.01
SPIDR-218ENST00000522222 DALRD3Q5D0E6 543 aaKnown RBP8.72□□□□□ -1.01
SPIDR-218ENST00000522222 ERICH6Q7L0X2 663 aa8.72□□□□□ -1.01
SPIDR-218ENST00000522222 NUTM1Q86Y26 1132 aa8.72□□□□□ -1.01
SPIDR-218ENST00000522222 ZNF34Q8IZ26 560 aa8.72□□□□□ -1.01
SPIDR-218ENST00000522222 HYPKQ9NX55 129 aa8.72□□□□□ -1.01
SPIDR-218ENST00000522222 CACNA1SQ13698 1873 aa8.72□□□□□ -1.01
SPIDR-218ENST00000522222 ADCY9O60503 1353 aa8.72□□□□□ -1.01
SPIDR-218ENST00000522222 H0YIN7 160 aa8.71□□□□□ -1.02
SPIDR-218ENST00000522222 TCERG1O14776 1098 aaKnown RBP8.71□□□□□ -1.02
SPIDR-218ENST00000522222 TWISTNBQ3B726 338 aaPredicted RBP8.71□□□□□ -1.02
SPIDR-218ENST00000522222 PARP10Q53GL7 1025 aa8.71□□□□□ -1.02
SPIDR-218ENST00000522222 CCDC30Q5VVM6 783 aa8.71□□□□□ -1.02
SPIDR-218ENST00000522222 SUSD4Q5VX71 490 aa8.71□□□□□ -1.02
SPIDR-218ENST00000522222 PIP4P2Q8N4L2 257 aa8.71□□□□□ -1.02
SPIDR-218ENST00000522222 PLBD2Q8NHP8 589 aa8.71□□□□□ -1.02
SPIDR-218ENST00000522222 NYXQ9GZU5 481 aa8.71□□□□□ -1.02
SPIDR-218ENST00000522222 SRGNP10124 158 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 EXOSC9Q06265 439 aaKnown RBP8.7□□□□□ -1.02
SPIDR-218ENST00000522222 GOLGA2Q08379 1002 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 ERFEQ4G0M1 354 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 HSP90AB3PQ58FF7 597 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 STYK1Q6J9G0 422 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 TPTE2Q6XPS3 522 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 NLRP10Q86W26 655 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 TTLL6Q8N841 843 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 ZNF622Q969S3 477 aaKnown RBP eCLIP8.7□□□□□ -1.02
SPIDR-218ENST00000522222 MYH16Q9H6N6 1097 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 PHAXQ9H814 394 aaKnown RBP8.7□□□□□ -1.02
SPIDR-218ENST00000522222 ZNF219Q9P2Y4 722 aaPredicted RBP8.7□□□□□ -1.02
SPIDR-218ENST00000522222 PDZRN3Q9UPQ7 1066 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 LAMB2P55268 1798 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 SLX4Q8IY92 1834 aa8.7□□□□□ -1.02
SPIDR-218ENST00000522222 GTF2E1P29083 439 aaPredicted RBP8.69□□□□□ -1.02
SPIDR-218ENST00000522222 RASSF7Q02833 373 aa8.69□□□□□ -1.02
SPIDR-218ENST00000522222 TCIRG1Q13488 830 aa8.69□□□□□ -1.02
SPIDR-218ENST00000522222 PRPF40BQ6NWY9 871 aaKnown RBP8.69□□□□□ -1.02
SPIDR-218ENST00000522222 ANKRD13DQ6ZTN6 518 aa8.69□□□□□ -1.02
SPIDR-218ENST00000522222 ARHGAP27Q6ZUM4 889 aa8.69□□□□□ -1.02
SPIDR-218ENST00000522222 C3orf67Q6ZVT6 689 aa8.69□□□□□ -1.02
SPIDR-218ENST00000522222 PPP1R42Q7Z4L9 355 aa8.69□□□□□ -1.02
SPIDR-218ENST00000522222 ZNF428Q96B54 188 aa8.69□□□□□ -1.02
SPIDR-218ENST00000522222 MASTLQ96GX5 879 aa8.69□□□□□ -1.02
SPIDR-218ENST00000522222 ISCA1Q9BUE6 129 aa8.69□□□□□ -1.02
SPIDR-218ENST00000522222 UTP14AQ9BVJ6 771 aaKnown RBP8.69□□□□□ -1.02
SPIDR-218ENST00000522222 STK31Q9BXU1 1019 aa8.69□□□□□ -1.02
SPIDR-218ENST00000522222 DDX60Q8IY21 1712 aaKnown RBP8.68□□□□□ -1.02
SPIDR-218ENST00000522222 KLRG2A4D1S0 409 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-218ENST00000522222 ATP5J2-PTCD1G3V325 749 aa8.68□□□□□ -1.02
SPIDR-218ENST00000522222 NPR1P16066 1061 aa8.68□□□□□ -1.02
SPIDR-218ENST00000522222 CRY2Q49AN0 593 aa8.68□□□□□ -1.02
SPIDR-218ENST00000522222 G2E3Q7L622 706 aa8.68□□□□□ -1.02
SPIDR-218ENST00000522222 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
SPIDR-218ENST00000522222 ZNF784Q8NCA9 323 aaPredicted RBP8.68□□□□□ -1.02
SPIDR-218ENST00000522222 CNKSR1Q969H4 720 aa8.68□□□□□ -1.02
SPIDR-218ENST00000522222 CHMP4AQ9BY43 222 aa8.68□□□□□ -1.02
SPIDR-218ENST00000522222 TIAM2Q8IVF5 1701 aa8.68□□□□□ -1.02
SPIDR-218ENST00000522222 E9PSI1 815 aa8.67□□□□□ -1.02
SPIDR-218ENST00000522222 NFKBIEO00221 500 aa8.67□□□□□ -1.02
SPIDR-218ENST00000522222 C21orf2O43822 256 aa8.67□□□□□ -1.02
SPIDR-218ENST00000522222 VAMP4O75379 141 aa8.67□□□□□ -1.02
SPIDR-218ENST00000522222 FER1L6Q2WGJ9 1857 aa8.67□□□□□ -1.02
SPIDR-218ENST00000522222 SYNE4Q8N205 404 aa8.67□□□□□ -1.02
SPIDR-218ENST00000522222 SH3TC1Q8TE82 1336 aa8.67□□□□□ -1.02
SPIDR-218ENST00000522222 CCDC136Q96JN2 1154 aa8.67□□□□□ -1.02
SPIDR-218ENST00000522222 MYD88Q99836 296 aa8.67□□□□□ -1.02
SPIDR-218ENST00000522222 TRMT112Q9UI30 125 aaKnown RBP8.67□□□□□ -1.02
SPIDR-218ENST00000522222 SBF1O95248 1867 aa8.66□□□□□ -1.02
SPIDR-218ENST00000522222 SNED1Q8TER0 1413 aa8.66□□□□□ -1.02
SPIDR-218ENST00000522222 DDX58O95786 925 aaKnown RBP8.66□□□□□ -1.02
SPIDR-218ENST00000522222 HCLS1P14317 486 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-218ENST00000522222 PRELPP51888 382 aa8.66□□□□□ -1.02
SPIDR-218ENST00000522222 IRX6P78412 446 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-218ENST00000522222 FLIIQ13045 1269 aa8.66□□□□□ -1.02
SPIDR-218ENST00000522222 C9orf131Q5VYM1 1079 aa8.66□□□□□ -1.02
SPIDR-218ENST00000522222 SLC51AQ86UW1 340 aa8.66□□□□□ -1.02
SPIDR-218ENST00000522222 RPGRQ92834 1020 aaKnown RBP8.66□□□□□ -1.02
SPIDR-218ENST00000522222 METTL22Q9BUU2 404 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-218ENST00000522222 MAP3K2Q9Y2U5 619 aa8.66□□□□□ -1.02
SPIDR-218ENST00000522222 CACNA1FO60840 1977 aa8.66□□□□□ -1.02
SPIDR-218ENST00000522222 COL4A1P02462 1669 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 PI4KAP2A4QPH2 592 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 HOXA10P31260 410 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-218ENST00000522222 EVX2Q03828 476 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 SLFN5Q08AF3 891 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
SPIDR-218ENST00000522222 CCDC93Q567U6 631 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 SLC10A5Q5PT55 438 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 OLFM4Q6UX06 510 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 KSR2Q6VAB6 950 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 PI4KAP1Q8N8J0 262 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 C7orf43Q8WVR3 580 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 FAM89AQ96GI7 184 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 CDCA7LQ96GN5 454 aa8.65□□□□□ -1.02
SPIDR-218ENST00000522222 RNF181Q9P0P0 153 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms