RNA–Protein interactions for RNA: ENST00000522153.1

CD74-207, Transcript of CD74 molecule, humanhuman

TSL 2

Gene CD74, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-207ENST00000522153 LTBP3Q9NS15 1303 aa17.29■□□□□ 0.36
CD74-207ENST00000522153 GTF2E1P29083 439 aaPredicted RBP17.29■□□□□ 0.36
CD74-207ENST00000522153 TCIRG1Q13488 830 aa17.29■□□□□ 0.36
CD74-207ENST00000522153 PPP1R42Q7Z4L9 355 aa17.29■□□□□ 0.36
CD74-207ENST00000522153 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
CD74-207ENST00000522153 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
CD74-207ENST00000522153 ELL2O00472 640 aaPredicted RBP17.27■□□□□ 0.36
CD74-207ENST00000522153 HOXA10P31260 410 aaPredicted RBP17.27■□□□□ 0.36
CD74-207ENST00000522153 ANKRD13DQ6ZTN6 518 aa17.27■□□□□ 0.36
CD74-207ENST00000522153 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
CD74-207ENST00000522153 NLRP10Q86W26 655 aa17.27■□□□□ 0.36
CD74-207ENST00000522153 PLBD2Q8NHP8 589 aa17.27■□□□□ 0.36
CD74-207ENST00000522153 IL16Q14005 1332 aa17.26■□□□□ 0.35
CD74-207ENST00000522153 ZC3H4Q9UPT8 1303 aaKnown RBP17.26■□□□□ 0.35
CD74-207ENST00000522153 ALDH1B1P30837 517 aa17.26■□□□□ 0.35
CD74-207ENST00000522153 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
CD74-207ENST00000522153 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
CD74-207ENST00000522153 TSPYL6Q8N831 410 aa17.26■□□□□ 0.35
CD74-207ENST00000522153 UTP14AQ9BVJ6 771 aaKnown RBP17.26■□□□□ 0.35
CD74-207ENST00000522153 NMRK2Q9NPI5 230 aa17.26■□□□□ 0.35
CD74-207ENST00000522153 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
CD74-207ENST00000522153 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
CD74-207ENST00000522153 SYNE4Q8N205 404 aa17.25■□□□□ 0.35
CD74-207ENST00000522153 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
CD74-207ENST00000522153 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
CD74-207ENST00000522153 RNF123Q5XPI4 1314 aa17.24■□□□□ 0.35
CD74-207ENST00000522153 ISCA1Q9BUE6 129 aa17.24■□□□□ 0.35
CD74-207ENST00000522153 CRAMP1Q96RY5 1269 aa17.23■□□□□ 0.35
CD74-207ENST00000522153 TAOK3Q9H2K8 898 aa17.23■□□□□ 0.35
CD74-207ENST00000522153 WDR90Q96KV7 1748 aa17.23■□□□□ 0.35
CD74-207ENST00000522153 PCNTO95613 3336 aa17.23■□□□□ 0.35
CD74-207ENST00000522153 GLTPD2A6NH11 291 aa17.22■□□□□ 0.35
CD74-207ENST00000522153 TRIM28Q13263 835 aaKnown RBP17.22■□□□□ 0.35
CD74-207ENST00000522153 CCDC93Q567U6 631 aa17.22■□□□□ 0.35
CD74-207ENST00000522153 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
CD74-207ENST00000522153 NLRP3Q96P20 1036 aa17.22■□□□□ 0.35
CD74-207ENST00000522153 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
CD74-207ENST00000522153 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.35
CD74-207ENST00000522153 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
CD74-207ENST00000522153 RPGRQ92834 1020 aaKnown RBP17.21■□□□□ 0.35
CD74-207ENST00000522153 RRAGCQ9HB90 399 aa17.21■□□□□ 0.35
CD74-207ENST00000522153 TRMT112Q9UI30 125 aaKnown RBP17.21■□□□□ 0.35
CD74-207ENST00000522153 MYH3P11055 1940 aa17.21■□□□□ 0.35
CD74-207ENST00000522153 POTECB2RU33 542 aa17.2■□□□□ 0.34
CD74-207ENST00000522153 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
CD74-207ENST00000522153 TOMM70O94826 608 aa17.2■□□□□ 0.34
CD74-207ENST00000522153 HCLS1P14317 486 aaPredicted RBP17.2■□□□□ 0.34
CD74-207ENST00000522153 FKBP4Q02790 459 aaKnown RBP eCLIP17.2■□□□□ 0.34
CD74-207ENST00000522153 SLC51AQ86UW1 340 aa17.2■□□□□ 0.34
CD74-207ENST00000522153 RTKN2Q8IZC4 609 aa17.2■□□□□ 0.34
CD74-207ENST00000522153 RBM17Q96I25 401 aaKnown RBP17.2■□□□□ 0.34
CD74-207ENST00000522153 SALL2Q9Y467 1007 aaPredicted RBP17.2■□□□□ 0.34
CD74-207ENST00000522153 SH3TC1Q8TE82 1336 aa17.2■□□□□ 0.34
CD74-207ENST00000522153 ZNF428Q96B54 188 aa17.19■□□□□ 0.34
CD74-207ENST00000522153 CHMP4AQ9BY43 222 aa17.19■□□□□ 0.34
CD74-207ENST00000522153 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
CD74-207ENST00000522153 SCN4AP35499 1836 aa17.19■□□□□ 0.34
CD74-207ENST00000522153 TWISTNBQ3B726 338 aaPredicted RBP17.18■□□□□ 0.34
CD74-207ENST00000522153 CC2D2BQ6DHV5 1058 aa17.18■□□□□ 0.34
CD74-207ENST00000522153 RIC3Q7Z5B4 369 aa17.18■□□□□ 0.34
CD74-207ENST00000522153 PSMD1Q99460 953 aa17.18■□□□□ 0.34
CD74-207ENST00000522153 FANCIQ9NVI1 1328 aa17.18■□□□□ 0.34
CD74-207ENST00000522153 LRRC37AA6NMS7 1700 aa17.17■□□□□ 0.34
CD74-207ENST00000522153 FAM89AQ96GI7 184 aa17.17■□□□□ 0.34
CD74-207ENST00000522153 ZNF277Q9NRM2 450 aaPredicted RBP17.17■□□□□ 0.34
CD74-207ENST00000522153 ABCC4O15439 1325 aa17.17■□□□□ 0.34
CD74-207ENST00000522153 COL4A1P02462 1669 aa17.16■□□□□ 0.34
CD74-207ENST00000522153 COL4A5P29400 1685 aa17.16■□□□□ 0.34
CD74-207ENST00000522153 GOLGA2Q08379 1002 aa17.16■□□□□ 0.34
CD74-207ENST00000522153 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
CD74-207ENST00000522153 VAMP4O75379 141 aa17.15■□□□□ 0.34
CD74-207ENST00000522153 HSPA6P17066 643 aa17.15■□□□□ 0.34
CD74-207ENST00000522153 DPY19L2Q6NUT2 758 aa17.15■□□□□ 0.34
CD74-207ENST00000522153 G2E3Q7L622 706 aa17.15■□□□□ 0.34
CD74-207ENST00000522153 RBM46Q8TBY0 533 aaKnown RBP17.15■□□□□ 0.34
CD74-207ENST00000522153 METTL22Q9BUU2 404 aaPredicted RBP17.15■□□□□ 0.34
CD74-207ENST00000522153 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.33
CD74-207ENST00000522153 BBOX1O75936 387 aa17.14■□□□□ 0.33
CD74-207ENST00000522153 VEGFAP15692 232 aaPredicted RBP17.14■□□□□ 0.33
CD74-207ENST00000522153 IARSP41252 1262 aaKnown RBP17.14■□□□□ 0.33
CD74-207ENST00000522153 SF3B3Q15393 1217 aaKnown RBP17.14■□□□□ 0.33
CD74-207ENST00000522153 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.33
CD74-207ENST00000522153 CCDC191Q8NCU4 936 aa17.14■□□□□ 0.33
CD74-207ENST00000522153 MYD88Q99836 296 aa17.14■□□□□ 0.33
CD74-207ENST00000522153 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
CD74-207ENST00000522153 ZNF521Q96K83 1311 aa17.14■□□□□ 0.33
CD74-207ENST00000522153 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
CD74-207ENST00000522153 FZD9O00144 591 aa17.13■□□□□ 0.33
CD74-207ENST00000522153 DDX58O95786 925 aaKnown RBP17.13■□□□□ 0.33
CD74-207ENST00000522153 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
CD74-207ENST00000522153 EXOSC9Q06265 439 aaKnown RBP17.13■□□□□ 0.33
CD74-207ENST00000522153 KSR2Q6VAB6 950 aa17.13■□□□□ 0.33
CD74-207ENST00000522153 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
CD74-207ENST00000522153 ZBTB38Q8NAP3 1195 aaPredicted RBP17.13■□□□□ 0.33
CD74-207ENST00000522153 MAP3K2Q9Y2U5 619 aa17.13■□□□□ 0.33
CD74-207ENST00000522153 IRS4O14654 1257 aaPredicted RBP17.12■□□□□ 0.33
CD74-207ENST00000522153 DDNO94850 711 aaPredicted RBP17.12■□□□□ 0.33
CD74-207ENST00000522153 IGKV5-2P06315 115 aa17.12■□□□□ 0.33
CD74-207ENST00000522153 RTL5Q5HYW3 569 aaPredicted RBP17.12■□□□□ 0.33
CD74-207ENST00000522153 DDX46Q7L014 1031 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms