RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 C5P01031 1676 aa7.35□□□□□ -1.23
CTNNA1-232ENST00000522013 TAF1LQ8IZX4 1826 aa7.34□□□□□ -1.23
CTNNA1-232ENST00000522013 ACEP12821 1306 aa7.34□□□□□ -1.23
CTNNA1-232ENST00000522013 MLLT1Q03111 559 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-232ENST00000522013 MTMR2Q13614 643 aa7.34□□□□□ -1.23
CTNNA1-232ENST00000522013 SLC27A3Q5K4L6 730 aa7.34□□□□□ -1.23
CTNNA1-232ENST00000522013 EPS8L1Q8TE68 723 aa7.34□□□□□ -1.23
CTNNA1-232ENST00000522013 SYMPKQ92797 1274 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-232ENST00000522013 NUDT16Q96DE0 195 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-232ENST00000522013 TRAIPQ9BWF2 469 aa7.34□□□□□ -1.23
CTNNA1-232ENST00000522013 C14orf93Q9H972 538 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-232ENST00000522013 KCPQ6ZWJ8 1503 aa7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 ARHGAP33O14559 1287 aa7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 CFHP08603 1231 aa7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 SAMD7Q7Z3H4 446 aa7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 COL23A1Q86Y22 540 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 WWC1Q8IX03 1113 aa7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 TSC1Q92574 1164 aa7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 SYTL4Q96C24 671 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 SLC4A5Q9BY07 1137 aa7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 PPIP5K1Q6PFW1 1433 aa7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 SPATA31E1Q6ZUB1 1445 aa7.33□□□□□ -1.24
CTNNA1-232ENST00000522013 SBF1O95248 1867 aa7.32□□□□□ -1.24
CTNNA1-232ENST00000522013 USP54Q70EL1 1684 aa7.32□□□□□ -1.24
CTNNA1-232ENST00000522013 QRICH2Q9H0J4 1663 aa7.32□□□□□ -1.24
CTNNA1-232ENST00000522013 SMC1BQ8NDV3 1235 aa7.32□□□□□ -1.24
CTNNA1-232ENST00000522013 PRM3Q9NNZ6 103 aa7.32□□□□□ -1.24
CTNNA1-232ENST00000522013 VPS9D1Q9Y2B5 631 aa7.32□□□□□ -1.24
CTNNA1-232ENST00000522013 BRCA1P38398 1863 aaKnown RBP7.32□□□□□ -1.24
CTNNA1-232ENST00000522013 CCDC88AQ3V6T2 1871 aa7.32□□□□□ -1.24
CTNNA1-232ENST00000522013 POLR3AO14802 1390 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-232ENST00000522013 SLIT3O75094 1523 aa7.32□□□□□ -1.24
CTNNA1-232ENST00000522013 ARFGEF1Q9Y6D6 1849 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 C6orf229H3BNL8 230 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 FOXN1O15353 648 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 VAC14Q08AM6 782 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 CPSF1Q10570 1443 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 ARHGAP27Q6ZUM4 889 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 ABHD8Q96I13 439 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 CARD10Q9BWT7 1032 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 BCS1LQ9Y276 419 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 KIF13BQ9NQT8 1826 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 CCDC7Q96M83 1385 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 LTN1O94822 1766 aa7.31□□□□□ -1.24
CTNNA1-232ENST00000522013 KDM2BQ8NHM5 1336 aa7.3□□□□□ -1.24
CTNNA1-232ENST00000522013 KIAA1551Q9HCM1 1747 aa7.3□□□□□ -1.24
CTNNA1-232ENST00000522013 ADGRB1O14514 1584 aa7.3□□□□□ -1.24
CTNNA1-232ENST00000522013 CCDC85CA6NKD9 419 aa7.3□□□□□ -1.24
CTNNA1-232ENST00000522013 HDGFL1Q5TGJ6 251 aa7.3□□□□□ -1.24
CTNNA1-232ENST00000522013 HELBQ8NG08 1087 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-232ENST00000522013 RRAGCQ9HB90 399 aa7.3□□□□□ -1.24
CTNNA1-232ENST00000522013 CCNL1Q9UK58 526 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-232ENST00000522013 PLEKHG2Q9H7P9 1386 aa7.3□□□□□ -1.24
CTNNA1-232ENST00000522013 UBR3Q6ZT12 1888 aa7.3□□□□□ -1.24
CTNNA1-232ENST00000522013 PER1O15534 1290 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-232ENST00000522013 RNF40O75150 1001 aa7.29□□□□□ -1.24
CTNNA1-232ENST00000522013 C9orf131Q5VYM1 1079 aa7.29□□□□□ -1.24
CTNNA1-232ENST00000522013 SLF2Q8IX21 1173 aa7.29□□□□□ -1.24
CTNNA1-232ENST00000522013 AIDAQ96BJ3 306 aa7.29□□□□□ -1.24
CTNNA1-232ENST00000522013 PRDM10Q9NQV6 1147 aa7.29□□□□□ -1.24
CTNNA1-232ENST00000522013 PRR7Q8TB68 274 aa7.28□□□□□ -1.24
CTNNA1-232ENST00000522013 CDK19Q9BWU1 502 aa7.28□□□□□ -1.24
CTNNA1-232ENST00000522013 MKRN1Q9UHC7 482 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-232ENST00000522013 C10orf71Q711Q0 1435 aa7.27□□□□□ -1.24
CTNNA1-232ENST00000522013 TOGARAM1Q9Y4F4 1720 aa7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 VIRMAQ69YN4 1812 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 BHMG1C9JSJ3 638 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 IL2RBP14784 551 aa7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 ATP6V1AP38606 617 aa7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 CTCFP49711 727 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 NR6A1Q15406 480 aa7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 PUS10Q3MIT2 529 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 DDX54Q8TDD1 881 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 NLRP2Q9NX02 1062 aa7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 C4BP0C0L5 1744 aa7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 TIAM2Q8IVF5 1701 aa7.27□□□□□ -1.25
CTNNA1-232ENST00000522013 PXDNLA1KZ92 1463 aa7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 RFX1P22670 979 aa7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 LBX1P52954 281 aa7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 SRPK2P78362 688 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 WASHC4Q2M389 1173 aa7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 MORN1Q5T089 497 aa7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 AEBP1Q8IUX7 1158 aa7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 ZFRQ96KR1 1074 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 UCN2Q96RP3 112 aa7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 ALG2Q9H553 416 aa7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 RNF181Q9P0P0 153 aa7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 TNRC18O15417 2968 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-232ENST00000522013 PBX2P40425 430 aa7.25□□□□□ -1.25
CTNNA1-232ENST00000522013 GRIPAP1Q4V328 841 aa7.25□□□□□ -1.25
CTNNA1-232ENST00000522013 LAPTM4BQ86VI4 370 aa7.25□□□□□ -1.25
CTNNA1-232ENST00000522013 FLAD1Q8NFF5 587 aa7.25□□□□□ -1.25
CTNNA1-232ENST00000522013 PBXIP1Q96AQ6 731 aa7.25□□□□□ -1.25
CTNNA1-232ENST00000522013 SLC27A5Q9Y2P5 690 aa7.25□□□□□ -1.25
CTNNA1-232ENST00000522013 USP47Q96K76 1375 aa7.24□□□□□ -1.25
CTNNA1-232ENST00000522013 RGPD2P0DJD1 1756 aa7.24□□□□□ -1.25
CTNNA1-232ENST00000522013 A0A0G2JLW4 131 aa7.24□□□□□ -1.25
CTNNA1-232ENST00000522013 SLC4A3P48751 1232 aa7.24□□□□□ -1.25
CTNNA1-232ENST00000522013 LSM11P83369 360 aaKnown RBP eCLIP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms