RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 PRIMPOLQ96LW4 560 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 ORC3Q9UBD5 711 aaPredicted RBP13.08□□□□□ -0.32
LAMA4-219ENST00000522006 HAND2P61296 217 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 CCDC102BQ68D86 513 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 IPO4Q8TEX9 1081 aaKnown RBP13.08□□□□□ -0.32
LAMA4-219ENST00000522006 MICU3Q86XE3 530 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 EHBP1Q8NDI1 1231 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 FAM135AQ9P2D6 1515 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 KIF5BP33176 963 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 BMP2KLQ5H9B9 411 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 FLIIQ13045 1269 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 KLHL40Q2TBA0 621 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 SLF2Q8IX21 1173 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 KAT14Q9H8E8 782 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 VAT1LQ9HCJ6 419 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 SYCP3Q8IZU3 236 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 EXOC1Q9NV70 894 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 EMILIN1Q9Y6C2 1016 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 NCOA7Q8NI08 942 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 ZNF830Q96NB3 372 aaPredicted RBP13.07□□□□□ -0.32
LAMA4-219ENST00000522006 NESP48681 1621 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 TRIM47Q96LD4 638 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 MMRN2Q9H8L6 949 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 DBF4Q9UBU7 674 aaPredicted RBP13.07□□□□□ -0.32
LAMA4-219ENST00000522006 HCLS1P14317 486 aaPredicted RBP13.07□□□□□ -0.32
LAMA4-219ENST00000522006 COMMD10Q9Y6G5 202 aa13.07□□□□□ -0.32
LAMA4-219ENST00000522006 ATP2C2O75185 946 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 ZSCAN22P10073 491 aaPredicted RBP13.06□□□□□ -0.32
LAMA4-219ENST00000522006 PIP4K2BP78356 416 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 IFI16Q16666 785 aaKnown RBP13.06□□□□□ -0.32
LAMA4-219ENST00000522006 MFSD6Q6ZSS7 791 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 STXBP4Q6ZWJ1 553 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 HMG20BQ9P0W2 317 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 DHX29Q7Z478 1369 aaKnown RBP13.06□□□□□ -0.32
LAMA4-219ENST00000522006 UBASH3AP57075 661 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 CKAP4Q07065 602 aaKnown RBP13.06□□□□□ -0.32
LAMA4-219ENST00000522006 SLC4A8Q2Y0W8 1093 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
LAMA4-219ENST00000522006 TBC1D32Q96NH3 1257 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 PUF60Q9UHX1 559 aaKnown RBP13.06□□□□□ -0.32
LAMA4-219ENST00000522006 C6orf163Q5TEZ5 329 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 ZSCAN16Q9H4T2 348 aaPredicted RBP13.06□□□□□ -0.32
LAMA4-219ENST00000522006 N4BP3O15049 544 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 ANO6Q4KMQ2 910 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 TRMT1LQ7Z2T5 733 aaKnown RBP13.06□□□□□ -0.32
LAMA4-219ENST00000522006 RMND1Q9NWS8 449 aa13.06□□□□□ -0.32
LAMA4-219ENST00000522006 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.06□□□□□ -0.32
LAMA4-219ENST00000522006 IGHDP01880 384 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 UBA7P41226 1012 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 RRAGBQ5VZM2 374 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
LAMA4-219ENST00000522006 SYKP43405 635 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 CNPY2Q9Y2B0 182 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 TSPY2A6NKD2 308 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 CAVIN2O95810 425 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 LRRC27Q9C0I9 530 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
LAMA4-219ENST00000522006 A0A1W2PRG0 241 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 GPTP24298 496 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 PDE4BQ07343 736 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 KIAA0753Q2KHM9 967 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 TSNARE1Q96NA8 513 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 SNRKQ9NRH2 765 aa13.05□□□□□ -0.32
LAMA4-219ENST00000522006 RAPGEF3O95398 923 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 KRT222Q8N1A0 295 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 TMX3Q96JJ7 454 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 EPRSP07814 1512 aaKnown RBP13.04□□□□□ -0.32
LAMA4-219ENST00000522006 CDK13Q14004 1512 aaKnown RBP13.04□□□□□ -0.32
LAMA4-219ENST00000522006 TTC21AQ8NDW8 1320 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 FERP16591 822 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 CCDC155Q8N6L0 562 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 IKBKGQ9Y6K9 419 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 NECAB1Q8N987 351 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 PPM1FP49593 454 aaPredicted RBP13.04□□□□□ -0.32
LAMA4-219ENST00000522006 PPP1R14CQ8TAE6 165 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 AFMP43652 599 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 CTAGE1Q96RT6 745 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 SERPINA10Q9UK55 444 aa13.04□□□□□ -0.32
LAMA4-219ENST00000522006 TBC1D5Q92609 795 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 SAMM50Q9Y512 469 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 CTAGE15A4D2H0 777 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 CTAGE8P0CG41 777 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 PPP1R42Q7Z4L9 355 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 CTAGE6Q86UF2 777 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 CTAGE4Q8IX94 777 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 PIK3R4Q99570 1358 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 TIGD1Q96MW7 591 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 PSMD1Q99460 953 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 C11orf95C9JLR9 678 aaPredicted RBP13.03□□□□□ -0.32
LAMA4-219ENST00000522006 AKR1B10O60218 316 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 DRC1Q96MC2 740 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 CWC25Q9NXE8 425 aaPredicted RBP13.03□□□□□ -0.32
LAMA4-219ENST00000522006 TBCAO75347 108 aaKnown RBP13.03□□□□□ -0.32
LAMA4-219ENST00000522006 USP48Q86UV5 1035 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
LAMA4-219ENST00000522006 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms