RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 PHOX2BQ99453 314 aa10.99□□□□□ -0.65
VPS13B-210ENST00000521932 LGR6Q9HBX8 967 aa10.99□□□□□ -0.65
VPS13B-210ENST00000521932 MAP3K5Q99683 1374 aa10.99□□□□□ -0.65
VPS13B-210ENST00000521932 KCNQ2O43526 872 aa10.98□□□□□ -0.65
VPS13B-210ENST00000521932 CCDC125Q86Z20 511 aa10.98□□□□□ -0.65
VPS13B-210ENST00000521932 CEMIPQ8WUJ3 1361 aa10.98□□□□□ -0.65
VPS13B-210ENST00000521932 KDM6AO15550 1401 aaPredicted RBP10.98□□□□□ -0.65
VPS13B-210ENST00000521932 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.97□□□□□ -0.65
VPS13B-210ENST00000521932 OATP04181 439 aa10.97□□□□□ -0.65
VPS13B-210ENST00000521932 SLC10A3P09131 477 aa10.97□□□□□ -0.65
VPS13B-210ENST00000521932 CCDC27Q2M243 656 aa10.97□□□□□ -0.65
VPS13B-210ENST00000521932 NGEFQ8N5V2 710 aa10.97□□□□□ -0.65
VPS13B-210ENST00000521932 RTF1Q92541 710 aaKnown RBP10.97□□□□□ -0.65
VPS13B-210ENST00000521932 ACSBG1Q96GR2 724 aa10.97□□□□□ -0.65
VPS13B-210ENST00000521932 ADAMTS7Q9UKP4 1686 aa10.97□□□□□ -0.65
VPS13B-210ENST00000521932 TRIM37O94972 964 aa10.96□□□□□ -0.65
VPS13B-210ENST00000521932 LMOD3Q0VAK6 560 aa10.96□□□□□ -0.65
VPS13B-210ENST00000521932 NFATC2IPQ8NCF5 419 aa10.96□□□□□ -0.65
VPS13B-210ENST00000521932 SLC52A2Q9HAB3 445 aa10.96□□□□□ -0.65
VPS13B-210ENST00000521932 PLSCR1O15162 318 aa10.95□□□□□ -0.66
VPS13B-210ENST00000521932 CABP4P57796 275 aa10.95□□□□□ -0.66
VPS13B-210ENST00000521932 DCTN1Q14203 1278 aa10.95□□□□□ -0.66
VPS13B-210ENST00000521932 NEUROD2Q15784 382 aa10.95□□□□□ -0.66
VPS13B-210ENST00000521932 MCM10Q7L590 875 aa10.95□□□□□ -0.66
VPS13B-210ENST00000521932 PTF1AQ7RTS3 328 aa10.95□□□□□ -0.66
VPS13B-210ENST00000521932 PIGBQ92521 554 aa10.95□□□□□ -0.66
VPS13B-210ENST00000521932 RRP7AQ9Y3A4 280 aaKnown RBP10.95□□□□□ -0.66
VPS13B-210ENST00000521932 SBF2Q86WG5 1849 aa10.95□□□□□ -0.66
VPS13B-210ENST00000521932 SYTL4Q96C24 671 aaPredicted RBP10.94□□□□□ -0.66
VPS13B-210ENST00000521932 IL21Q9HBE4 155 aa10.94□□□□□ -0.66
VPS13B-210ENST00000521932 TMOD3Q9NYL9 352 aa10.94□□□□□ -0.66
VPS13B-210ENST00000521932 SCN11AQ9UI33 1791 aa10.94□□□□□ -0.66
VPS13B-210ENST00000521932 TOGARAM1Q9Y4F4 1720 aa10.94□□□□□ -0.66
VPS13B-210ENST00000521932 MRC1P22897 1456 aa10.93□□□□□ -0.66
VPS13B-210ENST00000521932 NHSQ6T4R5 1651 aa10.93□□□□□ -0.66
VPS13B-210ENST00000521932 COPS2P61201 443 aa10.93□□□□□ -0.66
VPS13B-210ENST00000521932 TEFQ10587 303 aa10.93□□□□□ -0.66
VPS13B-210ENST00000521932 TAF7Q15545 349 aaPredicted RBP10.93□□□□□ -0.66
VPS13B-210ENST00000521932 WWC1Q8IX03 1113 aa10.93□□□□□ -0.66
VPS13B-210ENST00000521932 NKX2-3Q8TAU0 364 aa10.93□□□□□ -0.66
VPS13B-210ENST00000521932 DLG5Q8TDM6 1919 aa10.93□□□□□ -0.66
VPS13B-210ENST00000521932 DOT1LQ8TEK3 1739 aa10.92□□□□□ -0.66
VPS13B-210ENST00000521932 APBA3O96018 575 aa10.92□□□□□ -0.66
VPS13B-210ENST00000521932 ATG3Q9NT62 314 aa10.92□□□□□ -0.66
VPS13B-210ENST00000521932 BABAM1Q9NWV8 329 aa10.92□□□□□ -0.66
VPS13B-210ENST00000521932 ITGB4P16144 1822 aa10.91□□□□□ -0.66
VPS13B-210ENST00000521932 CFHP08603 1231 aa10.91□□□□□ -0.66
VPS13B-210ENST00000521932 SF3B2Q13435 895 aaKnown RBP10.91□□□□□ -0.66
VPS13B-210ENST00000521932 NECTIN2Q92692 538 aa10.91□□□□□ -0.66
VPS13B-210ENST00000521932 SMARCC1Q92922 1105 aaPredicted RBP10.91□□□□□ -0.66
VPS13B-210ENST00000521932 THUMPD2Q9BTF0 503 aaKnown RBP10.91□□□□□ -0.66
VPS13B-210ENST00000521932 ASAP1Q9ULH1 1129 aa10.91□□□□□ -0.66
VPS13B-210ENST00000521932 ZNF521Q96K83 1311 aa10.9□□□□□ -0.66
VPS13B-210ENST00000521932 BTBD11A6QL63 1104 aa10.9□□□□□ -0.66
VPS13B-210ENST00000521932 RGS20O76081 388 aa10.9□□□□□ -0.66
VPS13B-210ENST00000521932 ZNF853P0CG23 659 aa10.9□□□□□ -0.66
VPS13B-210ENST00000521932 SLC4A3P48751 1232 aa10.9□□□□□ -0.66
VPS13B-210ENST00000521932 CALD1Q05682 793 aaKnown RBP10.9□□□□□ -0.66
VPS13B-210ENST00000521932 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
VPS13B-210ENST00000521932 BLOC1S3Q6QNY0 202 aa10.9□□□□□ -0.66
VPS13B-210ENST00000521932 WDR63Q8IWG1 891 aa10.9□□□□□ -0.66
VPS13B-210ENST00000521932 CAMKK2Q96RR4 588 aa10.9□□□□□ -0.66
VPS13B-210ENST00000521932 VIRMAQ69YN4 1812 aaKnown RBP10.89□□□□□ -0.67
VPS13B-210ENST00000521932 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
VPS13B-210ENST00000521932 CHL1O00533 1208 aa10.89□□□□□ -0.67
VPS13B-210ENST00000521932 BAG6P46379 1132 aa10.89□□□□□ -0.67
VPS13B-210ENST00000521932 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
VPS13B-210ENST00000521932 TNS1Q9HBL0 1735 aaKnown RBP10.89□□□□□ -0.67
VPS13B-210ENST00000521932 BTAF1O14981 1849 aa10.88□□□□□ -0.67
VPS13B-210ENST00000521932 IL16Q14005 1332 aa10.88□□□□□ -0.67
VPS13B-210ENST00000521932 SIPA1L3O60292 1781 aaPredicted RBP10.88□□□□□ -0.67
VPS13B-210ENST00000521932 SOCS7O14512 581 aa10.88□□□□□ -0.67
VPS13B-210ENST00000521932 SLC39A6Q13433 755 aa10.88□□□□□ -0.67
VPS13B-210ENST00000521932 IFT57Q9NWB7 429 aa10.88□□□□□ -0.67
VPS13B-210ENST00000521932 SALL2Q9Y467 1007 aaPredicted RBP10.88□□□□□ -0.67
VPS13B-210ENST00000521932 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
VPS13B-210ENST00000521932 PALLDQ8WX93 1383 aa10.88□□□□□ -0.67
VPS13B-210ENST00000521932 KAT6BQ8WYB5 2073 aa10.88□□□□□ -0.67
VPS13B-210ENST00000521932 ACTN4O43707 911 aaKnown RBP10.87□□□□□ -0.67
VPS13B-210ENST00000521932 HMGB2P26583 209 aaKnown RBP10.87□□□□□ -0.67
VPS13B-210ENST00000521932 GNAI1P63096 354 aa10.87□□□□□ -0.67
VPS13B-210ENST00000521932 MAP2K5Q13163 448 aa10.87□□□□□ -0.67
VPS13B-210ENST00000521932 EZH2Q15910 746 aaKnown RBP10.87□□□□□ -0.67
VPS13B-210ENST00000521932 TXNRD1Q16881 649 aa10.87□□□□□ -0.67
VPS13B-210ENST00000521932 TMEM132AQ24JP5 1023 aa10.87□□□□□ -0.67
VPS13B-210ENST00000521932 SLC27A3Q5K4L6 730 aa10.87□□□□□ -0.67
VPS13B-210ENST00000521932 DEFB132Q7Z7B7 95 aa10.87□□□□□ -0.67
VPS13B-210ENST00000521932 MIS18AQ9NYP9 233 aa10.87□□□□□ -0.67
VPS13B-210ENST00000521932 LOC102724428A0A0B4J2F2 783 aa10.86□□□□□ -0.67
VPS13B-210ENST00000521932 KCNQ3O43525 872 aa10.86□□□□□ -0.67
VPS13B-210ENST00000521932 ZPR1O75312 459 aa10.86□□□□□ -0.67
VPS13B-210ENST00000521932 SIK1P57059 783 aa10.86□□□□□ -0.67
VPS13B-210ENST00000521932 EIF4A1P60842 406 aaKnown RBP10.86□□□□□ -0.67
VPS13B-210ENST00000521932 TTC5Q8N0Z6 440 aa10.86□□□□□ -0.67
VPS13B-210ENST00000521932 ZNF496Q96IT1 587 aaPredicted RBP10.86□□□□□ -0.67
VPS13B-210ENST00000521932 SLC4A9Q96Q91 983 aa10.86□□□□□ -0.67
VPS13B-210ENST00000521932 LRRC4BQ9NT99 713 aa10.86□□□□□ -0.67
VPS13B-210ENST00000521932 DAXXQ9UER7 740 aaPredicted RBP10.86□□□□□ -0.67
VPS13B-210ENST00000521932 TSPYL4Q9UJ04 414 aa10.86□□□□□ -0.67
VPS13B-210ENST00000521932 HEG1Q9ULI3 1381 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms