RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ANKRD36CQ5JPF3 1778 aa23.12■■□□□ 1.29
TRAPPC9-211ENST00000521700 ARFGEF2Q9Y6D5 1785 aa23.12■■□□□ 1.29
TRAPPC9-211ENST00000521700 RIC1Q4ADV7 1423 aa23.11■■□□□ 1.29
TRAPPC9-211ENST00000521700 LMNB1P20700 586 aa23.11■■□□□ 1.29
TRAPPC9-211ENST00000521700 SLC10A5Q5PT55 438 aa23.11■■□□□ 1.29
TRAPPC9-211ENST00000521700 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
TRAPPC9-211ENST00000521700 PHAXQ9H814 394 aaKnown RBP23.11■■□□□ 1.29
TRAPPC9-211ENST00000521700 ALDH1B1P30837 517 aa23.1■■□□□ 1.29
TRAPPC9-211ENST00000521700 C1QTNF8P60827 252 aa23.1■■□□□ 1.29
TRAPPC9-211ENST00000521700 CCDC30Q5VVM6 783 aa23.1■■□□□ 1.29
TRAPPC9-211ENST00000521700 FER1L6Q2WGJ9 1857 aa23.1■■□□□ 1.29
TRAPPC9-211ENST00000521700 CCDC88AQ3V6T2 1871 aa23.09■■□□□ 1.29
TRAPPC9-211ENST00000521700 C3orf67Q6ZVT6 689 aa23.09■■□□□ 1.29
TRAPPC9-211ENST00000521700 CHMP4AQ9BY43 222 aa23.09■■□□□ 1.29
TRAPPC9-211ENST00000521700 HOXA10P31260 410 aaPredicted RBP23.08■■□□□ 1.29
TRAPPC9-211ENST00000521700 SOGA3Q5TF21 947 aa23.08■■□□□ 1.29
TRAPPC9-211ENST00000521700 SYNE4Q8N205 404 aa23.08■■□□□ 1.29
TRAPPC9-211ENST00000521700 ISCA1Q9BUE6 129 aa23.08■■□□□ 1.29
TRAPPC9-211ENST00000521700 NLRP3Q96P20 1036 aa23.07■■□□□ 1.28
TRAPPC9-211ENST00000521700 TRMT112Q9UI30 125 aaKnown RBP23.07■■□□□ 1.28
TRAPPC9-211ENST00000521700 RNF123Q5XPI4 1314 aa23.07■■□□□ 1.28
TRAPPC9-211ENST00000521700 ATP5J2-PTCD1G3V325 749 aa23.06■■□□□ 1.28
TRAPPC9-211ENST00000521700 TWISTNBQ3B726 338 aaPredicted RBP23.06■■□□□ 1.28
TRAPPC9-211ENST00000521700 OLFM4Q6UX06 510 aa23.06■■□□□ 1.28
TRAPPC9-211ENST00000521700 RIC3Q7Z5B4 369 aa23.06■■□□□ 1.28
TRAPPC9-211ENST00000521700 RPGRQ92834 1020 aaKnown RBP23.06■■□□□ 1.28
TRAPPC9-211ENST00000521700 ZNF428Q96B54 188 aa23.06■■□□□ 1.28
TRAPPC9-211ENST00000521700 TAOK3Q9H2K8 898 aa23.06■■□□□ 1.28
TRAPPC9-211ENST00000521700 LTBP3Q9NS15 1303 aa23.06■■□□□ 1.28
TRAPPC9-211ENST00000521700 FANCIQ9NVI1 1328 aa23.06■■□□□ 1.28
TRAPPC9-211ENST00000521700 TCERG1O14776 1098 aaKnown RBP23.05■■□□□ 1.28
TRAPPC9-211ENST00000521700 KIF3CO14782 793 aa23.05■■□□□ 1.28
TRAPPC9-211ENST00000521700 GOLGA2Q08379 1002 aa23.05■■□□□ 1.28
TRAPPC9-211ENST00000521700 CCDC93Q567U6 631 aa23.05■■□□□ 1.28
TRAPPC9-211ENST00000521700 SPINK5Q9NQ38 1064 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC9-211ENST00000521700 HCLS1P14317 486 aaPredicted RBP23.04■■□□□ 1.28
TRAPPC9-211ENST00000521700 TRIM28Q13263 835 aaKnown RBP23.04■■□□□ 1.28
TRAPPC9-211ENST00000521700 RBM17Q96I25 401 aaKnown RBP23.04■■□□□ 1.28
TRAPPC9-211ENST00000521700 CRAMP1Q96RY5 1269 aa23.04■■□□□ 1.28
TRAPPC9-211ENST00000521700 NMRK2Q9NPI5 230 aa23.04■■□□□ 1.28
TRAPPC9-211ENST00000521700 SH3TC1Q8TE82 1336 aa23.04■■□□□ 1.28
TRAPPC9-211ENST00000521700 ZC3H4Q9UPT8 1303 aaKnown RBP23.04■■□□□ 1.28
TRAPPC9-211ENST00000521700 KDM2BQ8NHM5 1336 aa23.02■■□□□ 1.28
TRAPPC9-211ENST00000521700 RTKN2Q8IZC4 609 aa23.01■■□□□ 1.27
TRAPPC9-211ENST00000521700 FAM89AQ96GI7 184 aa23.01■■□□□ 1.27
TRAPPC9-211ENST00000521700 STK31Q9BXU1 1019 aa23.01■■□□□ 1.27
TRAPPC9-211ENST00000521700 DICER1Q9UPY3 1922 aaKnown RBP23.01■■□□□ 1.27
TRAPPC9-211ENST00000521700 VAMP4O75379 141 aa23■■□□□ 1.27
TRAPPC9-211ENST00000521700 DDX58O95786 925 aaKnown RBP23■■□□□ 1.27
TRAPPC9-211ENST00000521700 FKBP4Q02790 459 aaKnown RBP eCLIP23■■□□□ 1.27
TRAPPC9-211ENST00000521700 EXOSC9Q06265 439 aaKnown RBP23■■□□□ 1.27
TRAPPC9-211ENST00000521700 MYD88Q99836 296 aa23■■□□□ 1.27
TRAPPC9-211ENST00000521700 LAMB2P55268 1798 aa22.99■■□□□ 1.27
TRAPPC9-211ENST00000521700 SLC4A2P04920 1241 aa22.99■■□□□ 1.27
TRAPPC9-211ENST00000521700 G2E3Q7L622 706 aa22.99■■□□□ 1.27
TRAPPC9-211ENST00000521700 TIAM2Q8IVF5 1701 aa22.99■■□□□ 1.27
TRAPPC9-211ENST00000521700 GLTPD2A6NH11 291 aa22.98■■□□□ 1.27
TRAPPC9-211ENST00000521700 CC2D2BQ6DHV5 1058 aa22.98■■□□□ 1.27
TRAPPC9-211ENST00000521700 KSR2Q6VAB6 950 aa22.98■■□□□ 1.27
TRAPPC9-211ENST00000521700 METTL22Q9BUU2 404 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC9-211ENST00000521700 RRAGCQ9HB90 399 aa22.98■■□□□ 1.27
TRAPPC9-211ENST00000521700 ZNF521Q96K83 1311 aa22.98■■□□□ 1.27
TRAPPC9-211ENST00000521700 SNED1Q8TER0 1413 aa22.98■■□□□ 1.27
TRAPPC9-211ENST00000521700 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
TRAPPC9-211ENST00000521700 PPEF1O14829 653 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC9-211ENST00000521700 RTL5Q5HYW3 569 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC9-211ENST00000521700 SLC51AQ86UW1 340 aa22.97■■□□□ 1.27
TRAPPC9-211ENST00000521700 MYH16Q9H6N6 1097 aa22.97■■□□□ 1.27
TRAPPC9-211ENST00000521700 ZNF277Q9NRM2 450 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC9-211ENST00000521700 MAP3K2Q9Y2U5 619 aa22.97■■□□□ 1.27
TRAPPC9-211ENST00000521700 PI4KAP2A4QPH2 592 aa22.96■■□□□ 1.27
TRAPPC9-211ENST00000521700 PI4KAP1Q8N8J0 262 aa22.96■■□□□ 1.27
TRAPPC9-211ENST00000521700 CCDC191Q8NCU4 936 aa22.96■■□□□ 1.27
TRAPPC9-211ENST00000521700 ABCC4O15439 1325 aa22.96■■□□□ 1.27
TRAPPC9-211ENST00000521700 DDX60Q8IY21 1712 aaKnown RBP22.96■■□□□ 1.27
TRAPPC9-211ENST00000521700 ZBTB38Q8NAP3 1195 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC9-211ENST00000521700 IRS4O14654 1257 aaPredicted RBP22.94■■□□□ 1.26
TRAPPC9-211ENST00000521700 BBOX1O75936 387 aa22.94■■□□□ 1.26
TRAPPC9-211ENST00000521700 TOMM70O94826 608 aa22.94■■□□□ 1.26
TRAPPC9-211ENST00000521700 DPY19L2Q6NUT2 758 aa22.94■■□□□ 1.26
TRAPPC9-211ENST00000521700 DDX46Q7L014 1031 aaKnown RBP22.94■■□□□ 1.26
TRAPPC9-211ENST00000521700 PSMD1Q99460 953 aa22.94■■□□□ 1.26
TRAPPC9-211ENST00000521700 ATP6V0A2Q9Y487 856 aa22.94■■□□□ 1.26
TRAPPC9-211ENST00000521700 SF3B3Q15393 1217 aaKnown RBP22.93■■□□□ 1.26
TRAPPC9-211ENST00000521700 GRIPAP1Q4V328 841 aa22.93■■□□□ 1.26
TRAPPC9-211ENST00000521700 CWC25Q9NXE8 425 aaPredicted RBP22.93■■□□□ 1.26
TRAPPC9-211ENST00000521700 IGKV5-2P06315 115 aa22.92■■□□□ 1.26
TRAPPC9-211ENST00000521700 IARSP41252 1262 aaKnown RBP22.92■■□□□ 1.26
TRAPPC9-211ENST00000521700 FLIIQ13045 1269 aa22.92■■□□□ 1.26
TRAPPC9-211ENST00000521700 GRAPQ13588 217 aa22.92■■□□□ 1.26
TRAPPC9-211ENST00000521700 GRAPLQ8TC17 118 aaPredicted RBP22.92■■□□□ 1.26
TRAPPC9-211ENST00000521700 JARID2Q92833 1246 aaPredicted RBP22.92■■□□□ 1.26
TRAPPC9-211ENST00000521700 TAF1P21675 1872 aa22.92■■□□□ 1.26
TRAPPC9-211ENST00000521700 CACNA1FO60840 1977 aa22.91■■□□□ 1.26
TRAPPC9-211ENST00000521700 PCCAP05165 728 aaPredicted RBP22.91■■□□□ 1.26
TRAPPC9-211ENST00000521700 SP8Q8IXZ3 490 aa22.91■■□□□ 1.26
TRAPPC9-211ENST00000521700 TMX4Q9H1E5 349 aaPredicted RBP22.9■■□□□ 1.26
TRAPPC9-211ENST00000521700 POTECB2RU33 542 aa22.89■■□□□ 1.25
TRAPPC9-211ENST00000521700 DDNO94850 711 aaPredicted RBP22.89■■□□□ 1.25
TRAPPC9-211ENST00000521700 VEGFAP15692 232 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms