RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 C16orf71Q8IYS4 520 aaPredicted RBP11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 XAGE3Q8WTP9 111 aa11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 MBIPQ9NS73 344 aa11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 POTECB2RU33 542 aa11.43□□□□□ -0.58
NPIPB3-205ENST00000521589 CALD1Q05682 793 aaKnown RBP11.43□□□□□ -0.58
NPIPB3-205ENST00000521589 HDGFL1Q5TGJ6 251 aa11.43□□□□□ -0.58
NPIPB3-205ENST00000521589 CC2D2BQ6DHV5 1058 aa11.43□□□□□ -0.58
NPIPB3-205ENST00000521589 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
NPIPB3-205ENST00000521589 RTKN2Q8IZC4 609 aa11.43□□□□□ -0.58
NPIPB3-205ENST00000521589 CRAMP1Q96RY5 1269 aa11.43□□□□□ -0.58
NPIPB3-205ENST00000521589 IFT57Q9NWB7 429 aa11.43□□□□□ -0.58
NPIPB3-205ENST00000521589 CHPF2Q9P2E5 772 aa11.43□□□□□ -0.58
NPIPB3-205ENST00000521589 LAS1LQ9Y4W2 734 aaKnown RBP11.43□□□□□ -0.58
NPIPB3-205ENST00000521589 ANKRD36CQ5JPF3 1778 aa11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 TCIRG1Q13488 830 aa11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 GRIPAP1Q4V328 841 aa11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 DUSP27Q5VZP5 1158 aa11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 NLRP10Q86W26 655 aa11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 SMC1BQ8NDV3 1235 aa11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 RPGRQ92834 1020 aaKnown RBP11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 PSMD1Q99460 953 aa11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 UTP14AQ9BVJ6 771 aaKnown RBP11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 DBF4Q9UBU7 674 aaPredicted RBP11.42□□□□□ -0.58
NPIPB3-205ENST00000521589 GNAI1P63096 354 aa11.41□□□□□ -0.58
NPIPB3-205ENST00000521589 OLFM4Q6UX06 510 aa11.41□□□□□ -0.58
NPIPB3-205ENST00000521589 C3orf67Q6ZVT6 689 aa11.41□□□□□ -0.58
NPIPB3-205ENST00000521589 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
NPIPB3-205ENST00000521589 NLRP3Q96P20 1036 aa11.41□□□□□ -0.58
NPIPB3-205ENST00000521589 HYPKQ9NX55 129 aa11.41□□□□□ -0.58
NPIPB3-205ENST00000521589 PCNTO95613 3336 aa11.41□□□□□ -0.58
NPIPB3-205ENST00000521589 AIMP1Q12904 312 aaKnown RBP11.4□□□□□ -0.58
NPIPB3-205ENST00000521589 CCDC27Q2M243 656 aa11.4□□□□□ -0.58
NPIPB3-205ENST00000521589 CCDC184Q52MB2 194 aa11.4□□□□□ -0.58
NPIPB3-205ENST00000521589 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
NPIPB3-205ENST00000521589 DNAJC5GQ8N7S2 189 aa11.4□□□□□ -0.58
NPIPB3-205ENST00000521589 RBM17Q96I25 401 aaKnown RBP11.4□□□□□ -0.58
NPIPB3-205ENST00000521589 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
NPIPB3-205ENST00000521589 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
NPIPB3-205ENST00000521589 SH3TC1Q8TE82 1336 aa11.39□□□□□ -0.59
NPIPB3-205ENST00000521589 ZNF316A6NFI3 1004 aaPredicted RBP11.39□□□□□ -0.59
NPIPB3-205ENST00000521589 FZD9O00144 591 aa11.39□□□□□ -0.59
NPIPB3-205ENST00000521589 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
NPIPB3-205ENST00000521589 TRIM28Q13263 835 aaKnown RBP11.39□□□□□ -0.59
NPIPB3-205ENST00000521589 ANKRD13DQ6ZTN6 518 aa11.39□□□□□ -0.59
NPIPB3-205ENST00000521589 ISCA1Q9BUE6 129 aa11.39□□□□□ -0.59
NPIPB3-205ENST00000521589 PPEF1O14829 653 aaPredicted RBP11.38□□□□□ -0.59
NPIPB3-205ENST00000521589 DDNO94850 711 aaPredicted RBP11.38□□□□□ -0.59
NPIPB3-205ENST00000521589 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
NPIPB3-205ENST00000521589 TRMT112Q9UI30 125 aaKnown RBP11.38□□□□□ -0.59
NPIPB3-205ENST00000521589 ABCC4O15439 1325 aa11.37□□□□□ -0.59
NPIPB3-205ENST00000521589 ZNF541Q9H0D2 1346 aa11.37□□□□□ -0.59
NPIPB3-205ENST00000521589 IQCA1LA6NCM1 817 aa11.37□□□□□ -0.59
NPIPB3-205ENST00000521589 CHMP4AQ9BY43 222 aa11.37□□□□□ -0.59
NPIPB3-205ENST00000521589 ATP6V0A2Q9Y487 856 aa11.37□□□□□ -0.59
NPIPB3-205ENST00000521589 COL4A5P29400 1685 aa11.36□□□□□ -0.59
NPIPB3-205ENST00000521589 IL16Q14005 1332 aa11.36□□□□□ -0.59
NPIPB3-205ENST00000521589 BBOX1O75936 387 aa11.36□□□□□ -0.59
NPIPB3-205ENST00000521589 HCLS1P14317 486 aaPredicted RBP11.36□□□□□ -0.59
NPIPB3-205ENST00000521589 SLC51AQ86UW1 340 aa11.36□□□□□ -0.59
NPIPB3-205ENST00000521589 WWC1Q8IX03 1113 aa11.36□□□□□ -0.59
NPIPB3-205ENST00000521589 C8orf58Q8NAV2 365 aa11.36□□□□□ -0.59
NPIPB3-205ENST00000521589 VPS33BQ9H267 617 aa11.36□□□□□ -0.59
NPIPB3-205ENST00000521589 SCN4AP35499 1836 aa11.36□□□□□ -0.59
NPIPB3-205ENST00000521589 LAMB2P55268 1798 aa11.36□□□□□ -0.59
NPIPB3-205ENST00000521589 ANP32CO43423 234 aa11.35□□□□□ -0.59
NPIPB3-205ENST00000521589 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
NPIPB3-205ENST00000521589 GPC2Q8N158 579 aa11.35□□□□□ -0.59
NPIPB3-205ENST00000521589 JDP2Q8WYK2 163 aa11.35□□□□□ -0.59
NPIPB3-205ENST00000521589 RTFDC1Q9BY42 306 aaPredicted RBP11.35□□□□□ -0.59
NPIPB3-205ENST00000521589 TAF1DQ9H5J8 278 aaPredicted RBP11.35□□□□□ -0.59
NPIPB3-205ENST00000521589 MRS2Q9HD23 443 aa11.35□□□□□ -0.59
NPIPB3-205ENST00000521589 ATP5J2-PTCD1G3V325 749 aa11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 GRAPQ13588 217 aa11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 SF3B3Q15393 1217 aaKnown RBP11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 CCDC30Q5VVM6 783 aa11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 DDX46Q7L014 1031 aaKnown RBP11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 LDHDQ86WU2 507 aa11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 SP8Q8IXZ3 490 aa11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 GRAPLQ8TC17 118 aaPredicted RBP11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 KLRG1Q96E93 195 aa11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 DDX60Q8IY21 1712 aaKnown RBP11.34□□□□□ -0.59
NPIPB3-205ENST00000521589 LRRC37AA6NMS7 1700 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 ELL2O00472 640 aaPredicted RBP11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 POTEJP0CG39 1038 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 HTRA3P83110 453 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 LARGE2Q8N3Y3 721 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 TSPYL6Q8N831 410 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 JMYQ8N9B5 988 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 SUPT20HQ8NEM7 779 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 FAM89AQ96GI7 184 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 TMX4Q9H1E5 349 aaPredicted RBP11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 PHAXQ9H814 394 aaKnown RBP11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 ADAMTSL1Q8N6G6 1762 aa11.33□□□□□ -0.6
NPIPB3-205ENST00000521589 IRS4O14654 1257 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms