RNA–Protein interactions for RNA: ENST00000521588.3

R3HCC1-207, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene R3HCC1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-207ENST00000521588 HOXA10P31260 410 aaPredicted RBP25.12■■□□□ 1.61
R3HCC1-207ENST00000521588 CCDC93Q567U6 631 aa25.12■■□□□ 1.61
R3HCC1-207ENST00000521588 SLC10A5Q5PT55 438 aa25.12■■□□□ 1.61
R3HCC1-207ENST00000521588 DBF4Q9UBU7 674 aaPredicted RBP25.12■■□□□ 1.61
R3HCC1-207ENST00000521588 TCIRG1Q13488 830 aa25.11■■□□□ 1.61
R3HCC1-207ENST00000521588 HSP90AB3PQ58FF7 597 aa25.11■■□□□ 1.61
R3HCC1-207ENST00000521588 TIAM2Q8IVF5 1701 aa25.1■■□□□ 1.61
R3HCC1-207ENST00000521588 RBM46Q8TBY0 533 aaKnown RBP25.1■■□□□ 1.61
R3HCC1-207ENST00000521588 UTP14AQ9BVJ6 771 aaKnown RBP25.1■■□□□ 1.61
R3HCC1-207ENST00000521588 ANP32CO43423 234 aa25.09■■□□□ 1.61
R3HCC1-207ENST00000521588 OLFM4Q6UX06 510 aa25.09■■□□□ 1.61
R3HCC1-207ENST00000521588 NLRP10Q86W26 655 aa25.09■■□□□ 1.61
R3HCC1-207ENST00000521588 C3orf67Q6ZVT6 689 aa25.08■■□□□ 1.61
R3HCC1-207ENST00000521588 RTKN2Q8IZC4 609 aa25.08■■□□□ 1.61
R3HCC1-207ENST00000521588 RNF123Q5XPI4 1314 aa25.08■■□□□ 1.6
R3HCC1-207ENST00000521588 FKBP4Q02790 459 aaKnown RBP eCLIP25.07■■□□□ 1.6
R3HCC1-207ENST00000521588 CCDC27Q2M243 656 aa25.07■■□□□ 1.6
R3HCC1-207ENST00000521588 ANKRD13DQ6ZTN6 518 aa25.07■■□□□ 1.6
R3HCC1-207ENST00000521588 PLBD2Q8NHP8 589 aa25.07■■□□□ 1.6
R3HCC1-207ENST00000521588 RPGRQ92834 1020 aaKnown RBP25.07■■□□□ 1.6
R3HCC1-207ENST00000521588 CRAMP1Q96RY5 1269 aa25.07■■□□□ 1.6
R3HCC1-207ENST00000521588 HYPKQ9NX55 129 aa25.07■■□□□ 1.6
R3HCC1-207ENST00000521588 ANKRD36CQ5JPF3 1778 aa25.07■■□□□ 1.6
R3HCC1-207ENST00000521588 C16orf71Q8IYS4 520 aaPredicted RBP25.06■■□□□ 1.6
R3HCC1-207ENST00000521588 C8orf58Q8NAV2 365 aa25.06■■□□□ 1.6
R3HCC1-207ENST00000521588 NLRP3Q96P20 1036 aa25.06■■□□□ 1.6
R3HCC1-207ENST00000521588 MRS2Q9HD23 443 aa25.06■■□□□ 1.6
R3HCC1-207ENST00000521588 SNED1Q8TER0 1413 aa25.05■■□□□ 1.6
R3HCC1-207ENST00000521588 VEGFAP15692 232 aaPredicted RBP25.05■■□□□ 1.6
R3HCC1-207ENST00000521588 NCBP3Q53F19 620 aaKnown RBP25.05■■□□□ 1.6
R3HCC1-207ENST00000521588 DPY19L2Q6NUT2 758 aa25.05■■□□□ 1.6
R3HCC1-207ENST00000521588 RBM17Q96I25 401 aaKnown RBP25.05■■□□□ 1.6
R3HCC1-207ENST00000521588 POTECB2RU33 542 aa25.04■■□□□ 1.6
R3HCC1-207ENST00000521588 ELL2O00472 640 aaPredicted RBP25.04■■□□□ 1.6
R3HCC1-207ENST00000521588 CC2D2BQ6DHV5 1058 aa25.04■■□□□ 1.6
R3HCC1-207ENST00000521588 WWC1Q8IX03 1113 aa25.03■■□□□ 1.6
R3HCC1-207ENST00000521588 SYNE4Q8N205 404 aa25.03■■□□□ 1.6
R3HCC1-207ENST00000521588 ISCA1Q9BUE6 129 aa25.03■■□□□ 1.6
R3HCC1-207ENST00000521588 FSTL1Q12841 308 aa25.02■■□□□ 1.6
R3HCC1-207ENST00000521588 ZNF277Q9NRM2 450 aaPredicted RBP25.02■■□□□ 1.6
R3HCC1-207ENST00000521588 TRMT112Q9UI30 125 aaKnown RBP25.02■■□□□ 1.6
R3HCC1-207ENST00000521588 WDR90Q96KV7 1748 aa25.01■■□□□ 1.59
R3HCC1-207ENST00000521588 PSMD1Q99460 953 aa25.01■■□□□ 1.59
R3HCC1-207ENST00000521588 HCLS1P14317 486 aaPredicted RBP25■■□□□ 1.59
R3HCC1-207ENST00000521588 PHAXQ9H814 394 aaKnown RBP25■■□□□ 1.59
R3HCC1-207ENST00000521588 SH3TC1Q8TE82 1336 aa25■■□□□ 1.59
R3HCC1-207ENST00000521588 TRIM28Q13263 835 aaKnown RBP24.99■■□□□ 1.59
R3HCC1-207ENST00000521588 GRIPAP1Q4V328 841 aa24.99■■□□□ 1.59
R3HCC1-207ENST00000521588 TSPYL6Q8N831 410 aa24.99■■□□□ 1.59
R3HCC1-207ENST00000521588 DDNO94850 711 aaPredicted RBP24.98■■□□□ 1.59
R3HCC1-207ENST00000521588 IARSP41252 1262 aaKnown RBP24.98■■□□□ 1.59
R3HCC1-207ENST00000521588 APLP1P51693 650 aa24.98■■□□□ 1.59
R3HCC1-207ENST00000521588 CHMP4AQ9BY43 222 aa24.98■■□□□ 1.59
R3HCC1-207ENST00000521588 IL16Q14005 1332 aa24.97■■□□□ 1.59
R3HCC1-207ENST00000521588 ATP5J2-PTCD1G3V325 749 aa24.97■■□□□ 1.59
R3HCC1-207ENST00000521588 PPEF1O14829 653 aaPredicted RBP24.97■■□□□ 1.59
R3HCC1-207ENST00000521588 SLC51AQ86UW1 340 aa24.97■■□□□ 1.59
R3HCC1-207ENST00000521588 TSR2Q969E8 191 aaKnown RBP24.97■■□□□ 1.59
R3HCC1-207ENST00000521588 ABCC4O15439 1325 aa24.96■■□□□ 1.59
R3HCC1-207ENST00000521588 CCDC30Q5VVM6 783 aa24.96■■□□□ 1.59
R3HCC1-207ENST00000521588 SMC1BQ8NDV3 1235 aa24.96■■□□□ 1.59
R3HCC1-207ENST00000521588 LAMB2P55268 1798 aa24.95■■□□□ 1.59
R3HCC1-207ENST00000521588 RIC3Q7Z5B4 369 aa24.95■■□□□ 1.58
R3HCC1-207ENST00000521588 ATP6V0A2Q9Y487 856 aa24.95■■□□□ 1.58
R3HCC1-207ENST00000521588 FZD9O00144 591 aa24.94■■□□□ 1.58
R3HCC1-207ENST00000521588 TCERG1O14776 1098 aaKnown RBP24.94■■□□□ 1.58
R3HCC1-207ENST00000521588 BBOX1O75936 387 aa24.94■■□□□ 1.58
R3HCC1-207ENST00000521588 GOLGA2Q08379 1002 aa24.94■■□□□ 1.58
R3HCC1-207ENST00000521588 ZNF428Q96B54 188 aa24.94■■□□□ 1.58
R3HCC1-207ENST00000521588 FAM89AQ96GI7 184 aa24.94■■□□□ 1.58
R3HCC1-207ENST00000521588 L3MBTL3Q96JM7 780 aaPredicted RBP24.93■■□□□ 1.58
R3HCC1-207ENST00000521588 ZNF541Q9H0D2 1346 aa24.92■■□□□ 1.58
R3HCC1-207ENST00000521588 SP8Q8IXZ3 490 aa24.92■■□□□ 1.58
R3HCC1-207ENST00000521588 SF3B3Q15393 1217 aaKnown RBP24.91■■□□□ 1.58
R3HCC1-207ENST00000521588 DDX46Q7L014 1031 aaKnown RBP24.91■■□□□ 1.58
R3HCC1-207ENST00000521588 WDR63Q8IWG1 891 aa24.91■■□□□ 1.58
R3HCC1-207ENST00000521588 DNAJC5GQ8N7S2 189 aa24.91■■□□□ 1.58
R3HCC1-207ENST00000521588 DDX60Q8IY21 1712 aaKnown RBP24.9■■□□□ 1.58
R3HCC1-207ENST00000521588 GRAPQ13588 217 aa24.9■■□□□ 1.58
R3HCC1-207ENST00000521588 GRAPLQ8TC17 118 aaPredicted RBP24.9■■□□□ 1.58
R3HCC1-207ENST00000521588 JDP2Q8WYK2 163 aa24.9■■□□□ 1.58
R3HCC1-207ENST00000521588 COL4A5P29400 1685 aa24.9■■□□□ 1.58
R3HCC1-207ENST00000521588 TWISTNBQ3B726 338 aaPredicted RBP24.89■■□□□ 1.58
R3HCC1-207ENST00000521588 RTFDC1Q9BY42 306 aaPredicted RBP24.89■■□□□ 1.58
R3HCC1-207ENST00000521588 TMX4Q9H1E5 349 aaPredicted RBP24.89■■□□□ 1.58
R3HCC1-207ENST00000521588 CCDC191Q8NCU4 936 aa24.88■■□□□ 1.57
R3HCC1-207ENST00000521588 MYD88Q99836 296 aa24.88■■□□□ 1.57
R3HCC1-207ENST00000521588 METTL22Q9BUU2 404 aaPredicted RBP24.88■■□□□ 1.57
R3HCC1-207ENST00000521588 VPS33BQ9H267 617 aa24.88■■□□□ 1.57
R3HCC1-207ENST00000521588 SCN4AP35499 1836 aa24.87■■□□□ 1.57
R3HCC1-207ENST00000521588 IQCA1LA6NCM1 817 aa24.87■■□□□ 1.57
R3HCC1-207ENST00000521588 IRS4O14654 1257 aaPredicted RBP24.87■■□□□ 1.57
R3HCC1-207ENST00000521588 DDX58O95786 925 aaKnown RBP24.87■■□□□ 1.57
R3HCC1-207ENST00000521588 ZBTB38Q8NAP3 1195 aaPredicted RBP24.87■■□□□ 1.57
R3HCC1-207ENST00000521588 SALL2Q9Y467 1007 aaPredicted RBP24.87■■□□□ 1.57
R3HCC1-207ENST00000521588 TAF1P21675 1872 aa24.87■■□□□ 1.57
R3HCC1-207ENST00000521588 RTL5Q5HYW3 569 aaPredicted RBP24.86■■□□□ 1.57
R3HCC1-207ENST00000521588 GPC2Q8N158 579 aa24.86■■□□□ 1.57
R3HCC1-207ENST00000521588 LARGE2Q8N3Y3 721 aa24.86■■□□□ 1.57
R3HCC1-207ENST00000521588 TAF1DQ9H5J8 278 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms