RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 RIC3Q7Z5B4 369 aa16.06■□□□□ 0.16
NEFM-205ENST00000521540 SNX14Q9Y5W7 946 aa16.06■□□□□ 0.16
NEFM-205ENST00000521540 WDR33Q9C0J8 1336 aaKnown RBP16.06■□□□□ 0.16
NEFM-205ENST00000521540 PRPF40AO75400 957 aaKnown RBP16.05■□□□□ 0.16
NEFM-205ENST00000521540 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
NEFM-205ENST00000521540 CCDC173Q0VFZ6 552 aa16.05■□□□□ 0.16
NEFM-205ENST00000521540 CWF19L2Q2TBE0 894 aaKnown RBP16.05■□□□□ 0.16
NEFM-205ENST00000521540 SUCLG2Q96I99 432 aa16.05■□□□□ 0.16
NEFM-205ENST00000521540 DCAF5Q96JK2 942 aa16.05■□□□□ 0.16
NEFM-205ENST00000521540 ONECUT3O60422 494 aaPredicted RBP16.04■□□□□ 0.16
NEFM-205ENST00000521540 IL2RBP14784 551 aa16.04■□□□□ 0.16
NEFM-205ENST00000521540 NCLP19338 710 aaKnown RBP16.04■□□□□ 0.16
NEFM-205ENST00000521540 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
NEFM-205ENST00000521540 ZSCAN23Q3MJ62 389 aa16.04■□□□□ 0.16
NEFM-205ENST00000521540 KCNB2Q92953 911 aa16.04■□□□□ 0.16
NEFM-205ENST00000521540 TRIM44Q96DX7 344 aaPredicted RBP16.04■□□□□ 0.16
NEFM-205ENST00000521540 METTL22Q9BUU2 404 aaPredicted RBP16.04■□□□□ 0.16
NEFM-205ENST00000521540 TM6SF1Q9BZW5 370 aa16.04■□□□□ 0.16
NEFM-205ENST00000521540 IL25Q9H293 177 aa16.04■□□□□ 0.16
NEFM-205ENST00000521540 COL15A1P39059 1388 aa16.04■□□□□ 0.16
NEFM-205ENST00000521540 PRAMEF22A3QJZ6 481 aa16.03■□□□□ 0.16
NEFM-205ENST00000521540 SNRPA1P09661 255 aaKnown RBP16.03■□□□□ 0.16
NEFM-205ENST00000521540 RXRBP28702 533 aa16.03■□□□□ 0.16
NEFM-205ENST00000521540 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
NEFM-205ENST00000521540 CWC27Q6UX04 472 aaKnown RBP16.03■□□□□ 0.16
NEFM-205ENST00000521540 AACSQ86V21 672 aa16.03■□□□□ 0.16
NEFM-205ENST00000521540 TTC14Q96N46 770 aa16.03■□□□□ 0.16
NEFM-205ENST00000521540 CDCA7Q9BWT1 371 aaPredicted RBP16.03■□□□□ 0.16
NEFM-205ENST00000521540 UPF3BQ9BZI7 483 aaKnown RBP16.03■□□□□ 0.16
NEFM-205ENST00000521540 RRAGDQ9NQL2 400 aaPredicted RBP16.03■□□□□ 0.16
NEFM-205ENST00000521540 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.03■□□□□ 0.16
NEFM-205ENST00000521540 NEURL1BA8MQ27 555 aa16.03■□□□□ 0.16
NEFM-205ENST00000521540 NASPP49321 788 aaPredicted RBP16.03■□□□□ 0.16
NEFM-205ENST00000521540 TTC5Q8N0Z6 440 aa16.03■□□□□ 0.16
NEFM-205ENST00000521540 PPP1R9BQ96SB3 815 aa16.03■□□□□ 0.16
NEFM-205ENST00000521540 BICC1Q9H694 974 aaKnown RBP16.03■□□□□ 0.16
NEFM-205ENST00000521540 LIMCH1Q9UPQ0 1083 aa16.03■□□□□ 0.16
NEFM-205ENST00000521540 IGKV5-2P06315 115 aa16.02■□□□□ 0.16
NEFM-205ENST00000521540 CLCN1P35523 988 aa16.02■□□□□ 0.16
NEFM-205ENST00000521540 AIMP1Q12904 312 aaKnown RBP16.02■□□□□ 0.16
NEFM-205ENST00000521540 KAZALD1Q96I82 304 aa16.02■□□□□ 0.16
NEFM-205ENST00000521540 ZSCAN31Q96LW9 406 aaPredicted RBP16.02■□□□□ 0.16
NEFM-205ENST00000521540 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.16
NEFM-205ENST00000521540 LAMB4A4D0S4 1761 aa16.02■□□□□ 0.15
NEFM-205ENST00000521540 GCKRQ14397 625 aa16.01■□□□□ 0.15
NEFM-205ENST00000521540 NFATC2IPQ8NCF5 419 aa16.01■□□□□ 0.15
NEFM-205ENST00000521540 SYAP1Q96A49 352 aaPredicted RBP16.01■□□□□ 0.15
NEFM-205ENST00000521540 SNRKQ9NRH2 765 aa16.01■□□□□ 0.15
NEFM-205ENST00000521540 PA2G4Q9UQ80 394 aaKnown RBP16.01■□□□□ 0.15
NEFM-205ENST00000521540 TNS2Q63HR2 1409 aa16.01■□□□□ 0.15
NEFM-205ENST00000521540 SHANK3Q9BYB0 1731 aa16.01■□□□□ 0.15
NEFM-205ENST00000521540 SASH1O94885 1247 aa16.01■□□□□ 0.15
NEFM-205ENST00000521540 PDIA4P13667 645 aaKnown RBP16.01■□□□□ 0.15
NEFM-205ENST00000521540 VPS53Q5VIR6 699 aa16.01■□□□□ 0.15
NEFM-205ENST00000521540 GPT2Q8TD30 523 aa16.01■□□□□ 0.15
NEFM-205ENST00000521540 XAGE3Q8WTP9 111 aa16.01■□□□□ 0.15
NEFM-205ENST00000521540 ERBB4Q15303 1308 aa16.01■□□□□ 0.15
NEFM-205ENST00000521540 ANKRD13DQ6ZTN6 518 aa16■□□□□ 0.15
NEFM-205ENST00000521540 SH2B1Q9NRF2 756 aaPredicted RBP16■□□□□ 0.15
NEFM-205ENST00000521540 BRWD3Q6RI45 1802 aa16■□□□□ 0.15
NEFM-205ENST00000521540 ZKSCAN1P17029 563 aaPredicted RBP15.99■□□□□ 0.15
NEFM-205ENST00000521540 AK2P54819 239 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 SLC39A6Q13433 755 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 COPS6Q7L5N1 327 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 SEPT12Q8IYM1 358 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 COPRSQ9NQ92 184 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 AFDNP55196 1824 aaKnown RBP15.99■□□□□ 0.15
NEFM-205ENST00000521540 LRSAM1Q6UWE0 723 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 NOL8Q76FK4 1167 aaKnown RBP15.99■□□□□ 0.15
NEFM-205ENST00000521540 RASEFQ8IZ41 740 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 ZNF496Q96IT1 587 aaPredicted RBP15.99■□□□□ 0.15
NEFM-205ENST00000521540 MYD88Q99836 296 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 ZSWIM6Q9HCJ5 1215 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 CYP46A1Q9Y6A2 500 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 CCDC171Q6TFL3 1326 aa15.99■□□□□ 0.15
NEFM-205ENST00000521540 A0A0G2JS52 829 aa15.98■□□□□ 0.15
NEFM-205ENST00000521540 MYL6BP14649 208 aa15.98■□□□□ 0.15
NEFM-205ENST00000521540 NECTIN1Q15223 517 aa15.98■□□□□ 0.15
NEFM-205ENST00000521540 TMEM87AQ8NBN3 555 aa15.98■□□□□ 0.15
NEFM-205ENST00000521540 EAF2Q96CJ1 260 aaPredicted RBP15.98■□□□□ 0.15
NEFM-205ENST00000521540 ATP6V1DQ9Y5K8 247 aa15.98■□□□□ 0.15
NEFM-205ENST00000521540 EP400Q96L91 3159 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 ESPNB1AK53 854 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 CASTP20810 708 aaKnown RBP15.97■□□□□ 0.15
NEFM-205ENST00000521540 PSMA5P28066 241 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 CABP4P57796 275 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 DDB1Q16531 1140 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 ILDR2Q71H61 639 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 LRP10Q7Z4F1 713 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
NEFM-205ENST00000521540 PDRG1Q9NUG6 133 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 PCDH11XQ9BZA7 1347 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 PCDH11YQ9BZA8 1340 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 ARFGEF2Q9Y6D5 1785 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 RFX7Q2KHR2 1363 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 PHF14O94880 888 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 RUFY3Q7L099 469 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 MAP4K1Q92918 833 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms