RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 POLIQ9UNA4 740 aa5.74□□□□□ -1.49
HMGN1P28-201ENST00000521340 MEN1O00255 615 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 NDUFB5O43674 189 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 GDF11O95390 407 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 PDGFAP04085 211 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 MZF1P28698 734 aaPredicted RBP5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 GRNP28799 593 aaKnown RBP5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 PLCB3Q01970 1234 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 DGKZQ13574 1117 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 DBN1Q16643 649 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 NBPF15Q8N660 670 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 RHBDD1Q8TEB9 315 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 VTI1AQ96AJ9 217 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 ZNF837Q96EG3 531 aaPredicted RBP5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 DMRTB1Q96MA1 342 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 ZSCAN10Q96SZ4 725 aaPredicted RBP5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 NIFKQ9BYG3 293 aaKnown RBP5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 BACH2Q9BYV9 841 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 CABP1Q9NZU7 370 aa5.73□□□□□ -1.49
HMGN1P28-201ENST00000521340 LOC100996750A0A140TA64 210 aa5.72□□□□□ -1.49
HMGN1P28-201ENST00000521340 SRSF11Q05519 484 aaKnown RBP5.72□□□□□ -1.49
HMGN1P28-201ENST00000521340 POU4F2Q12837 409 aa5.72□□□□□ -1.49
HMGN1P28-201ENST00000521340 ENOX2Q16206 610 aaKnown RBP5.72□□□□□ -1.49
HMGN1P28-201ENST00000521340 ABTB2Q8N961 1025 aa5.72□□□□□ -1.49
HMGN1P28-201ENST00000521340 NGLY1Q96IV0 654 aa5.72□□□□□ -1.49
HMGN1P28-201ENST00000521340 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
HMGN1P28-201ENST00000521340 GPR25O00155 361 aa5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 PRPF40AO75400 957 aaKnown RBP5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 CELA2BP08218 269 aaPredicted RBP5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 ZAP70P43403 619 aa5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 DAB2P98082 770 aa5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 TMC4Q7Z404 712 aa5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 METTL16Q86W50 562 aaKnown RBP5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 TRIM22Q8IYM9 498 aa5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 ZNF280CQ8ND82 737 aa5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 EDEM1Q92611 657 aa5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 PARP2Q9UGN5 583 aa5.71□□□□□ -1.5
HMGN1P28-201ENST00000521340 ATP4AP20648 1035 aa5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 IRS1P35568 1242 aa5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 SUZ12Q15022 739 aaKnown RBP5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 IER5Q5VY09 327 aa5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 TREML1Q86YW5 311 aa5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 NLRP3Q96P20 1036 aa5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 DUSP9Q99956 384 aaKnown RBP5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 NIF3L1Q9GZT8 377 aa5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 ZDHHC3Q9NYG2 299 aa5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 ZNF232Q9UNY5 417 aa5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 DYRK1BQ9Y463 629 aa5.7□□□□□ -1.5
HMGN1P28-201ENST00000521340 TGFBR3LH3BV60 316 aa5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 MICAL2O94851 1124 aa5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 LDHBP07195 334 aaKnown RBP5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 INPP5BP32019 993 aa5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 RAD51AP2Q09MP3 1159 aa5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 PDE3BQ13370 1112 aa5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 WDR44Q5JSH3 913 aa5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 NBPF10Q6P3W6 841 aaKnown RBP5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 XKR5Q6UX68 686 aa5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 RIPOR1Q6ZS17 1223 aa5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 GMCL1Q96IK5 515 aa5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 FAM161BQ96MY7 647 aa5.69□□□□□ -1.5
HMGN1P28-201ENST00000521340 RNF225M0QZC1 329 aaPredicted RBP5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 CTSHP09668 335 aa5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 HDLBPQ00341 1268 aaKnown RBP5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 DNM1Q05193 864 aaKnown RBP5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 SLC27A3Q5K4L6 730 aa5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 TMEM214Q6NUQ4 689 aaKnown RBP5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 GTPBP3Q969Y2 492 aaKnown RBP5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 NUDT16Q96DE0 195 aaKnown RBP5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 SUSD3Q96L08 255 aa5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 C8orf37Q96NL8 207 aa5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 ZIC5Q96T25 663 aa5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 GAS2L1Q99501 681 aaPredicted RBP5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 MBIPQ9NS73 344 aa5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 KCNMB2Q9Y691 235 aa5.68□□□□□ -1.5
HMGN1P28-201ENST00000521340 IGF1RP08069 1367 aa5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 A6NHS1 94 aa5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 THBS1P07996 1170 aa5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 USP5P45974 858 aa5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 PLA2G4AP47712 749 aa5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 ORC1Q13415 861 aa5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 TRIP4Q15650 581 aaPredicted RBP5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 GPR152Q8TDT2 470 aa5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 CSRNP1Q96S65 589 aa5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 HCN2Q9UL51 889 aa5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 CHMP3Q9Y3E7 222 aa5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 GPC6Q9Y625 555 aaPredicted RBP5.67□□□□□ -1.5
HMGN1P28-201ENST00000521340 EIF1AYO14602 144 aaKnown RBP5.66□□□□□ -1.5
HMGN1P28-201ENST00000521340 MAPK8P45983 427 aa5.66□□□□□ -1.5
HMGN1P28-201ENST00000521340 ACDQ96AP0 544 aa5.66□□□□□ -1.5
HMGN1P28-201ENST00000521340 HSH2DQ96JZ2 352 aa5.66□□□□□ -1.5
HMGN1P28-201ENST00000521340 TIMMDC1Q9NPL8 285 aa5.66□□□□□ -1.5
HMGN1P28-201ENST00000521340 PNMA6FA0A0J9YX94 578 aa5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 H7C1W4 665 aa5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 SCAMP3O14828 347 aaKnown RBP5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 PHKA2P46019 1235 aa5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 FANCCQ00597 558 aa5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 MAP3K10Q02779 954 aa5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 AAMPQ13685 434 aa5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 TSNAXIP1Q2TAA8 658 aa5.65□□□□□ -1.5
HMGN1P28-201ENST00000521340 KANK3Q6NY19 840 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms