RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
SREK1-209ENST00000520953 ANO8Q9HCE9 1232 aaPredicted RBP18.85■□□□□ 0.61
SREK1-209ENST00000520953 RGPD3A6NKT7 1758 aaPredicted RBP18.84■□□□□ 0.61
SREK1-209ENST00000520953 RGPD4Q7Z3J3 1758 aa18.84■□□□□ 0.61
SREK1-209ENST00000520953 TUBGCP6Q96RT7 1819 aa18.84■□□□□ 0.61
SREK1-209ENST00000520953 TRAPPC3LQ5T215 181 aa18.84■□□□□ 0.61
SREK1-209ENST00000520953 FAM89AQ96GI7 184 aa18.84■□□□□ 0.61
SREK1-209ENST00000520953 BICC1Q9H694 974 aaKnown RBP18.84■□□□□ 0.61
SREK1-209ENST00000520953 NARFQ9UHQ1 456 aa18.84■□□□□ 0.61
SREK1-209ENST00000520953 H7C1W4 665 aa18.83■□□□□ 0.61
SREK1-209ENST00000520953 BICDL1Q6ZP65 573 aa18.83■□□□□ 0.61
SREK1-209ENST00000520953 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.61
SREK1-209ENST00000520953 TRIM28Q13263 835 aaKnown RBP18.83■□□□□ 0.6
SREK1-209ENST00000520953 TBC1D9BQ66K14 1250 aa18.83■□□□□ 0.6
SREK1-209ENST00000520953 CENPQQ7L2Z9 268 aaPredicted RBP18.83■□□□□ 0.6
SREK1-209ENST00000520953 SUSD4Q5VX71 490 aa18.82■□□□□ 0.6
SREK1-209ENST00000520953 PPP1R42Q7Z4L9 355 aa18.82■□□□□ 0.6
SREK1-209ENST00000520953 NIP7Q9Y221 180 aaKnown RBP eCLIP18.82■□□□□ 0.6
SREK1-209ENST00000520953 USP42Q9H9J4 1324 aaKnown RBP18.82■□□□□ 0.6
SREK1-209ENST00000520953 RFC4P35249 363 aa18.82■□□□□ 0.6
SREK1-209ENST00000520953 HSP90AB3PQ58FF7 597 aa18.82■□□□□ 0.6
SREK1-209ENST00000520953 RPAP2Q8IXW5 612 aaPredicted RBP18.82■□□□□ 0.6
SREK1-209ENST00000520953 TFCP2L1Q9NZI6 479 aa18.82■□□□□ 0.6
SREK1-209ENST00000520953 ZPR1O75312 459 aa18.81■□□□□ 0.6
SREK1-209ENST00000520953 IBTKQ9P2D0 1353 aaPredicted RBP18.81■□□□□ 0.6
SREK1-209ENST00000520953 ATP8B2P98198 1209 aa18.81■□□□□ 0.6
SREK1-209ENST00000520953 SF3B2Q13435 895 aaKnown RBP18.81■□□□□ 0.6
SREK1-209ENST00000520953 SSFA2P28290 1259 aa18.79■□□□□ 0.6
SREK1-209ENST00000520953 TRMT112Q9UI30 125 aaKnown RBP18.79■□□□□ 0.6
SREK1-209ENST00000520953 SRGAP3O43295 1099 aa18.79■□□□□ 0.6
SREK1-209ENST00000520953 BAG6P46379 1132 aa18.79■□□□□ 0.6
SREK1-209ENST00000520953 FOXO4P98177 505 aa18.79■□□□□ 0.6
SREK1-209ENST00000520953 COL23A1Q86Y22 540 aaPredicted RBP18.79■□□□□ 0.6
SREK1-209ENST00000520953 NUTM1Q86Y26 1132 aa18.79■□□□□ 0.6
SREK1-209ENST00000520953 ZBTB38Q8NAP3 1195 aaPredicted RBP18.79■□□□□ 0.6
SREK1-209ENST00000520953 PCCAP05165 728 aaPredicted RBP18.78■□□□□ 0.6
SREK1-209ENST00000520953 CLEC4GQ6UXB4 293 aa18.78■□□□□ 0.6
SREK1-209ENST00000520953 ZNF652Q9Y2D9 606 aa18.78■□□□□ 0.6
SREK1-209ENST00000520953 APBB1O00213 710 aa18.78■□□□□ 0.6
SREK1-209ENST00000520953 SMC5Q8IY18 1101 aa18.78■□□□□ 0.6
SREK1-209ENST00000520953 CCDC85AQ96PX6 553 aaPredicted RBP18.78■□□□□ 0.6
SREK1-209ENST00000520953 NTSR2O95665 410 aa18.77■□□□□ 0.6
SREK1-209ENST00000520953 GYS1P13807 737 aa18.77■□□□□ 0.6
SREK1-209ENST00000520953 ADRA2BP18089 450 aa18.77■□□□□ 0.6
SREK1-209ENST00000520953 CCDC24Q8N4L8 307 aa18.77■□□□□ 0.6
SREK1-209ENST00000520953 KLHDC4Q8TBB5 520 aa18.77■□□□□ 0.6
SREK1-209ENST00000520953 BCL11AQ9H165 835 aa18.77■□□□□ 0.6
SREK1-209ENST00000520953 PA2G4Q9UQ80 394 aaKnown RBP18.77■□□□□ 0.6
SREK1-209ENST00000520953 EXOC6BQ9Y2D4 811 aa18.77■□□□□ 0.6
SREK1-209ENST00000520953 PNPLA7Q6ZV29 1317 aa18.77■□□□□ 0.59
SREK1-209ENST00000520953 POLA2Q14181 598 aa18.76■□□□□ 0.59
SREK1-209ENST00000520953 SSH3Q8TE77 659 aa18.76■□□□□ 0.59
SREK1-209ENST00000520953 PDZRN3Q9UPQ7 1066 aa18.76■□□□□ 0.59
SREK1-209ENST00000520953 HCLS1P14317 486 aaPredicted RBP18.76■□□□□ 0.59
SREK1-209ENST00000520953 LMBR1LQ6UX01 489 aa18.76■□□□□ 0.59
SREK1-209ENST00000520953 DCTPP1Q9H773 170 aa18.76■□□□□ 0.59
SREK1-209ENST00000520953 MSH5O43196 834 aa18.75■□□□□ 0.59
SREK1-209ENST00000520953 MTX1Q13505 466 aa18.75■□□□□ 0.59
SREK1-209ENST00000520953 PDGFDQ9GZP0 370 aaPredicted RBP18.75■□□□□ 0.59
SREK1-209ENST00000520953 IRS4O14654 1257 aaPredicted RBP18.75■□□□□ 0.59
SREK1-209ENST00000520953 NFIXQ14938 502 aa18.75■□□□□ 0.59
SREK1-209ENST00000520953 RABL6Q3YEC7 729 aaPredicted RBP18.75■□□□□ 0.59
SREK1-209ENST00000520953 UTP14AQ9BVJ6 771 aaKnown RBP18.75■□□□□ 0.59
SREK1-209ENST00000520953 SLC15A2Q16348 729 aa18.74■□□□□ 0.59
SREK1-209ENST00000520953 SMARCA5O60264 1052 aaPredicted RBP18.74■□□□□ 0.59
SREK1-209ENST00000520953 COL24A1Q17RW2 1714 aa18.74■□□□□ 0.59
SREK1-209ENST00000520953 ERFEQ4G0M1 354 aa18.74■□□□□ 0.59
SREK1-209ENST00000520953 PARP10Q53GL7 1025 aa18.74■□□□□ 0.59
SREK1-209ENST00000520953 CHMP3Q9Y3E7 222 aa18.74■□□□□ 0.59
SREK1-209ENST00000520953 HMMRO75330 724 aa18.73■□□□□ 0.59
SREK1-209ENST00000520953 SETDB2Q96T68 719 aa18.73■□□□□ 0.59
SREK1-209ENST00000520953 DDX60Q8IY21 1712 aaKnown RBP18.73■□□□□ 0.59
SREK1-209ENST00000520953 ANKRD45Q5TZF3 282 aa18.72■□□□□ 0.59
SREK1-209ENST00000520953 C3orf67Q6ZVT6 689 aa18.72■□□□□ 0.59
SREK1-209ENST00000520953 LNPKQ9C0E8 428 aa18.72■□□□□ 0.59
SREK1-209ENST00000520953 SH3TC1Q8TE82 1336 aa18.72■□□□□ 0.59
SREK1-209ENST00000520953 CDHR2Q9BYE9 1310 aa18.72■□□□□ 0.59
SREK1-209ENST00000520953 ABCC12Q96J65 1359 aa18.72■□□□□ 0.59
SREK1-209ENST00000520953 PDE4AP27815 886 aa18.72■□□□□ 0.59
SREK1-209ENST00000520953 RFX5P48382 616 aaPredicted RBP18.72■□□□□ 0.59
SREK1-209ENST00000520953 MSL1Q68DK7 614 aa18.72■□□□□ 0.59
SREK1-209ENST00000520953 UPF1Q92900 1129 aaKnown RBP eCLIP18.72■□□□□ 0.59
SREK1-209ENST00000520953 RGS3P49796 1198 aa18.71■□□□□ 0.59
SREK1-209ENST00000520953 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
SREK1-209ENST00000520953 GCC1Q96CN9 775 aa18.71■□□□□ 0.59
SREK1-209ENST00000520953 SIL1Q9H173 461 aa18.71■□□□□ 0.59
SREK1-209ENST00000520953 SURF6O75683 361 aaKnown RBP18.71■□□□□ 0.59
SREK1-209ENST00000520953 NUCB1Q02818 461 aa18.71■□□□□ 0.59
SREK1-209ENST00000520953 DDR1Q08345 913 aa18.71■□□□□ 0.59
SREK1-209ENST00000520953 ZNF594Q96JF6 807 aaPredicted RBP18.71■□□□□ 0.59
SREK1-209ENST00000520953 STK32BQ9NY57 414 aa18.71■□□□□ 0.59
SREK1-209ENST00000520953 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.71■□□□□ 0.59
SREK1-209ENST00000520953 RGL2O15211 777 aa18.7■□□□□ 0.58
SREK1-209ENST00000520953 PLA2G12BQ9BX93 195 aa18.7■□□□□ 0.58
SREK1-209ENST00000520953 HDAC5Q9UQL6 1122 aa18.7■□□□□ 0.58
SREK1-209ENST00000520953 ILDR2Q71H61 639 aa18.69■□□□□ 0.58
SREK1-209ENST00000520953 NBPF5PQ86XG9 351 aaPredicted RBP18.69■□□□□ 0.58
SREK1-209ENST00000520953 GREM2Q9H772 168 aa18.69■□□□□ 0.58
SREK1-209ENST00000520953 CTSWP56202 376 aa18.69■□□□□ 0.58
SREK1-209ENST00000520953 C16orf71Q8IYS4 520 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms