RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 SPEM2Q0P670 501 aa9.42□□□□□ -0.9
PTPN12-214ENST00000520947 COX20Q5RI15 118 aa9.42□□□□□ -0.9
PTPN12-214ENST00000520947 ZNF468Q5VIY5 522 aaPredicted RBP9.42□□□□□ -0.9
PTPN12-214ENST00000520947 IER5Q5VY09 327 aa9.42□□□□□ -0.9
PTPN12-214ENST00000520947 SYT9Q86SS6 491 aa9.42□□□□□ -0.9
PTPN12-214ENST00000520947 KCTD17Q8N5Z5 321 aa9.42□□□□□ -0.9
PTPN12-214ENST00000520947 SAP130Q9H0E3 1048 aa9.42□□□□□ -0.9
PTPN12-214ENST00000520947 AMPD1P23109 780 aa9.41□□□□□ -0.9
PTPN12-214ENST00000520947 IDH3AP50213 366 aa9.41□□□□□ -0.9
PTPN12-214ENST00000520947 RASSF7Q02833 373 aa9.41□□□□□ -0.9
PTPN12-214ENST00000520947 FCHSD1Q86WN1 690 aa9.41□□□□□ -0.9
PTPN12-214ENST00000520947 IFT43Q96FT9 208 aa9.41□□□□□ -0.9
PTPN12-214ENST00000520947 LRRC4BQ9NT99 713 aa9.41□□□□□ -0.9
PTPN12-214ENST00000520947 DMGDHQ9UI17 866 aaKnown RBP9.41□□□□□ -0.9
PTPN12-214ENST00000520947 EPXP11678 715 aa9.4□□□□□ -0.9
PTPN12-214ENST00000520947 KCNQ4P56696 695 aa9.4□□□□□ -0.9
PTPN12-214ENST00000520947 RRAGCQ9HB90 399 aa9.4□□□□□ -0.9
PTPN12-214ENST00000520947 AVENQ9NQS1 362 aaPredicted RBP9.4□□□□□ -0.9
PTPN12-214ENST00000520947 TMEM88BA6NKF7 163 aa9.39□□□□□ -0.91
PTPN12-214ENST00000520947 MICAL2O94851 1124 aa9.39□□□□□ -0.91
PTPN12-214ENST00000520947 C16orf46Q6P387 395 aa9.39□□□□□ -0.91
PTPN12-214ENST00000520947 TMEM151AQ8N4L1 468 aa9.39□□□□□ -0.91
PTPN12-214ENST00000520947 CNTNAP5Q8WYK1 1306 aa9.38□□□□□ -0.91
PTPN12-214ENST00000520947 PTCD1O75127 700 aaKnown RBP9.38□□□□□ -0.91
PTPN12-214ENST00000520947 GDF11O95390 407 aa9.38□□□□□ -0.91
PTPN12-214ENST00000520947 INPP5BP32019 993 aa9.38□□□□□ -0.91
PTPN12-214ENST00000520947 SCNN1AP37088 669 aa9.38□□□□□ -0.91
PTPN12-214ENST00000520947 BHMTQ93088 406 aa9.38□□□□□ -0.91
PTPN12-214ENST00000520947 SCARF2Q96GP6 870 aaPredicted RBP9.38□□□□□ -0.91
PTPN12-214ENST00000520947 IRS1P35568 1242 aa9.37□□□□□ -0.91
PTPN12-214ENST00000520947 SNRPNP63162 240 aaKnown RBP9.37□□□□□ -0.91
PTPN12-214ENST00000520947 NEUROD1Q13562 356 aa9.37□□□□□ -0.91
PTPN12-214ENST00000520947 TREML1Q86YW5 311 aa9.37□□□□□ -0.91
PTPN12-214ENST00000520947 COL26A1Q96A83 441 aa9.37□□□□□ -0.91
PTPN12-214ENST00000520947 BTBD6Q96KE9 485 aa9.37□□□□□ -0.91
PTPN12-214ENST00000520947 SEPT3Q9UH03 358 aa9.37□□□□□ -0.91
PTPN12-214ENST00000520947 USP20Q9Y2K6 914 aa9.37□□□□□ -0.91
PTPN12-214ENST00000520947 RNF225M0QZC1 329 aaPredicted RBP9.36□□□□□ -0.91
PTPN12-214ENST00000520947 EPB42P16452 691 aa9.36□□□□□ -0.91
PTPN12-214ENST00000520947 GRNP28799 593 aaKnown RBP9.36□□□□□ -0.91
PTPN12-214ENST00000520947 ARSDP51689 593 aa9.36□□□□□ -0.91
PTPN12-214ENST00000520947 PODNQ7Z5L7 613 aa9.36□□□□□ -0.91
PTPN12-214ENST00000520947 SIN3BO75182 1162 aa9.35□□□□□ -0.91
PTPN12-214ENST00000520947 TBC1D8BQ0IIM8 1120 aa9.35□□□□□ -0.91
PTPN12-214ENST00000520947 ETFBKMTQ8IXQ9 262 aa9.35□□□□□ -0.91
PTPN12-214ENST00000520947 PNMA5Q96PV4 448 aa9.35□□□□□ -0.91
PTPN12-214ENST00000520947 IGFLR1Q9H665 355 aa9.35□□□□□ -0.91
PTPN12-214ENST00000520947 ELOA3CA0A087WX78 387 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-214ENST00000520947 ELOA3DA6NLF2 546 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-214ENST00000520947 TNFRSF10BO14763 440 aa9.34□□□□□ -0.91
PTPN12-214ENST00000520947 OPLAHO14841 1288 aa9.34□□□□□ -0.91
PTPN12-214ENST00000520947 BRD2P25440 801 aaKnown RBP9.34□□□□□ -0.91
PTPN12-214ENST00000520947 CCINQ13939 588 aa9.34□□□□□ -0.91
PTPN12-214ENST00000520947 ELOA3BQ3SY89 546 aa9.34□□□□□ -0.91
PTPN12-214ENST00000520947 FAM26DQ5JW98 314 aa9.34□□□□□ -0.91
PTPN12-214ENST00000520947 CHSY3Q70JA7 882 aa9.34□□□□□ -0.91
PTPN12-214ENST00000520947 KRT25Q7Z3Z0 450 aa9.34□□□□□ -0.91
PTPN12-214ENST00000520947 RGL4Q8IZJ4 473 aa9.34□□□□□ -0.91
PTPN12-214ENST00000520947 BEND7Q8N7W2 519 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-214ENST00000520947 ELOA3Q8NG57 546 aa9.34□□□□□ -0.91
PTPN12-214ENST00000520947 GSX2Q9BZM3 304 aa9.34□□□□□ -0.91
PTPN12-214ENST00000520947 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
PTPN12-214ENST00000520947 PHF20L1A8MW92 1017 aa9.32□□□□□ -0.92
PTPN12-214ENST00000520947 NFKB1P19838 968 aa9.32□□□□□ -0.92
PTPN12-214ENST00000520947 ALAS2P22557 587 aa9.32□□□□□ -0.92
PTPN12-214ENST00000520947 SSFA2P28290 1259 aa9.32□□□□□ -0.92
PTPN12-214ENST00000520947 CMTR1Q8N1G2 835 aaKnown RBP9.32□□□□□ -0.92
PTPN12-214ENST00000520947 UBE2OQ9C0C9 1292 aaKnown RBP9.32□□□□□ -0.92
PTPN12-214ENST00000520947 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.32□□□□□ -0.92
PTPN12-214ENST00000520947 HOXB4P17483 251 aaPredicted RBP9.31□□□□□ -0.92
PTPN12-214ENST00000520947 ADH7P40394 386 aa9.31□□□□□ -0.92
PTPN12-214ENST00000520947 TNFRSF25Q93038 417 aa9.31□□□□□ -0.92
PTPN12-214ENST00000520947 MKL2Q9ULH7 1088 aa9.31□□□□□ -0.92
PTPN12-214ENST00000520947 ADARB2-AS1A8MUL3 147 aa9.3□□□□□ -0.92
PTPN12-214ENST00000520947 STIM2Q9P246 746 aa9.3□□□□□ -0.92
PTPN12-214ENST00000520947 SASH3O75995 380 aa9.29□□□□□ -0.92
PTPN12-214ENST00000520947 TARSP26639 723 aaKnown RBP9.29□□□□□ -0.92
PTPN12-214ENST00000520947 MDFIQ99750 246 aa9.29□□□□□ -0.92
PTPN12-214ENST00000520947 ZBTB39O15060 712 aa9.28□□□□□ -0.92
PTPN12-214ENST00000520947 XYLBO75191 536 aa9.28□□□□□ -0.92
PTPN12-214ENST00000520947 DGKGP49619 791 aa9.28□□□□□ -0.92
PTPN12-214ENST00000520947 SUZ12Q15022 739 aaKnown RBP9.28□□□□□ -0.92
PTPN12-214ENST00000520947 KANK3Q6NY19 840 aa9.28□□□□□ -0.92
PTPN12-214ENST00000520947 LINC00114Q6XXX2 140 aa9.28□□□□□ -0.92
PTPN12-214ENST00000520947 ZFATQ9P243 1243 aa9.28□□□□□ -0.92
PTPN12-214ENST00000520947 USTQ9Y2C2 406 aa9.28□□□□□ -0.92
PTPN12-214ENST00000520947 RARAP10276 462 aa9.27□□□□□ -0.93
PTPN12-214ENST00000520947 ZAP70P43403 619 aa9.27□□□□□ -0.93
PTPN12-214ENST00000520947 PHLDB3Q6NSJ2 640 aa9.27□□□□□ -0.93
PTPN12-214ENST00000520947 RETREG2Q8NC44 543 aa9.27□□□□□ -0.93
PTPN12-214ENST00000520947 GTF3C2Q8WUA4 911 aaPredicted RBP9.27□□□□□ -0.93
PTPN12-214ENST00000520947 EFCC1Q9HA90 598 aa9.27□□□□□ -0.93
PTPN12-214ENST00000520947 DNAJB12Q9NXW2 375 aaKnown RBP9.27□□□□□ -0.93
PTPN12-214ENST00000520947 KCNMB2Q9Y691 235 aa9.27□□□□□ -0.93
PTPN12-214ENST00000520947 MTMR3Q13615 1198 aa9.26□□□□□ -0.93
PTPN12-214ENST00000520947 ABTB2Q8N961 1025 aa9.26□□□□□ -0.93
PTPN12-214ENST00000520947 GPR152Q8TDT2 470 aa9.26□□□□□ -0.93
PTPN12-214ENST00000520947 SUV39H2Q9H5I1 410 aa9.26□□□□□ -0.93
PTPN12-214ENST00000520947 SLC6A14Q9UN76 642 aa9.26□□□□□ -0.93
PTPN12-214ENST00000520947 STARD13Q9Y3M8 1113 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms