RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 CNBD1Q8NA66 436 aa19.44■□□□□ 0.7
LSM1-203ENST00000520755 PANK1Q8TE04 598 aa19.44■□□□□ 0.7
LSM1-203ENST00000520755 DNAAF4Q8WXU2 420 aa19.44■□□□□ 0.7
LSM1-203ENST00000520755 FHDC1Q9C0D6 1143 aaPredicted RBP19.44■□□□□ 0.7
LSM1-203ENST00000520755 C10orf71Q711Q0 1435 aa19.43■□□□□ 0.7
LSM1-203ENST00000520755 DDX60Q8IY21 1712 aaKnown RBP19.43■□□□□ 0.7
LSM1-203ENST00000520755 NEXNQ0ZGT2 675 aa19.43■□□□□ 0.7
LSM1-203ENST00000520755 PARP10Q53GL7 1025 aa19.43■□□□□ 0.7
LSM1-203ENST00000520755 PRR5LQ6MZQ0 368 aa19.43■□□□□ 0.7
LSM1-203ENST00000520755 NLRP10Q86W26 655 aa19.43■□□□□ 0.7
LSM1-203ENST00000520755 ISCA1Q9BUE6 129 aa19.43■□□□□ 0.7
LSM1-203ENST00000520755 MYH3P11055 1940 aa19.43■□□□□ 0.7
LSM1-203ENST00000520755 GTF2E1P29083 439 aaPredicted RBP19.42■□□□□ 0.7
LSM1-203ENST00000520755 TPTE2Q6XPS3 522 aa19.42■□□□□ 0.7
LSM1-203ENST00000520755 PPP1R42Q7Z4L9 355 aa19.42■□□□□ 0.7
LSM1-203ENST00000520755 DZIP1LQ8IYY4 767 aaKnown RBP19.42■□□□□ 0.7
LSM1-203ENST00000520755 NYXQ9GZU5 481 aa19.42■□□□□ 0.7
LSM1-203ENST00000520755 ST5P78524 1137 aa19.41■□□□□ 0.7
LSM1-203ENST00000520755 PDE3AQ14432 1141 aa19.41■□□□□ 0.7
LSM1-203ENST00000520755 SLC4A10Q6U841 1118 aa19.41■□□□□ 0.7
LSM1-203ENST00000520755 NUTM1Q86Y26 1132 aa19.41■□□□□ 0.7
LSM1-203ENST00000520755 TMEM57Q8N5G2 664 aa19.41■□□□□ 0.7
LSM1-203ENST00000520755 UTP14AQ9BVJ6 771 aaKnown RBP19.41■□□□□ 0.7
LSM1-203ENST00000520755 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
LSM1-203ENST00000520755 KIAA1551Q9HCM1 1747 aa19.4■□□□□ 0.7
LSM1-203ENST00000520755 NTSR2O95665 410 aa19.4■□□□□ 0.7
LSM1-203ENST00000520755 IGKV5-2P06315 115 aa19.4■□□□□ 0.7
LSM1-203ENST00000520755 CWF19L2Q2TBE0 894 aaKnown RBP19.4■□□□□ 0.7
LSM1-203ENST00000520755 BEND3Q5T5X7 828 aa19.4■□□□□ 0.7
LSM1-203ENST00000520755 CD2APQ9Y5K6 639 aa19.4■□□□□ 0.7
LSM1-203ENST00000520755 TNRC6CQ9HCJ0 1690 aaKnown RBP19.4■□□□□ 0.7
LSM1-203ENST00000520755 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
LSM1-203ENST00000520755 TRIM28Q13263 835 aaKnown RBP19.39■□□□□ 0.69
LSM1-203ENST00000520755 ERFEQ4G0M1 354 aa19.39■□□□□ 0.69
LSM1-203ENST00000520755 INTS3Q68E01 1043 aaKnown RBP19.39■□□□□ 0.69
LSM1-203ENST00000520755 FTSJ3Q8IY81 847 aaKnown RBP19.39■□□□□ 0.69
LSM1-203ENST00000520755 CWC25Q9NXE8 425 aaPredicted RBP19.39■□□□□ 0.69
LSM1-203ENST00000520755 TRMT112Q9UI30 125 aaKnown RBP19.39■□□□□ 0.69
LSM1-203ENST00000520755 NEURL1BA8MQ27 555 aa19.38■□□□□ 0.69
LSM1-203ENST00000520755 COL11A2P13942 1736 aaPredicted RBP19.38■□□□□ 0.69
LSM1-203ENST00000520755 CCDC191Q8NCU4 936 aa19.38■□□□□ 0.69
LSM1-203ENST00000520755 NLGN2Q8NFZ4 835 aa19.38■□□□□ 0.69
LSM1-203ENST00000520755 ABCC12Q96J65 1359 aa19.38■□□□□ 0.69
LSM1-203ENST00000520755 SYT17Q9BSW7 474 aa19.38■□□□□ 0.69
LSM1-203ENST00000520755 RTL5Q5HYW3 569 aaPredicted RBP19.37■□□□□ 0.69
LSM1-203ENST00000520755 LINS1Q8NG48 757 aa19.37■□□□□ 0.69
LSM1-203ENST00000520755 COG6Q9Y2V7 657 aa19.37■□□□□ 0.69
LSM1-203ENST00000520755 DLEC1Q9Y238 1755 aa19.37■□□□□ 0.69
LSM1-203ENST00000520755 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
LSM1-203ENST00000520755 MVPQ14764 893 aaKnown RBP19.36■□□□□ 0.69
LSM1-203ENST00000520755 SYNE4Q8N205 404 aa19.36■□□□□ 0.69
LSM1-203ENST00000520755 FAM89AQ96GI7 184 aa19.36■□□□□ 0.69
LSM1-203ENST00000520755 CRBNQ96SW2 442 aa19.36■□□□□ 0.69
LSM1-203ENST00000520755 CACNA1SQ13698 1873 aa19.35■□□□□ 0.69
LSM1-203ENST00000520755 MS4A1P11836 297 aa19.35■□□□□ 0.69
LSM1-203ENST00000520755 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
LSM1-203ENST00000520755 JARID2Q92833 1246 aaPredicted RBP19.35■□□□□ 0.69
LSM1-203ENST00000520755 BRIP1Q9BX63 1249 aa19.35■□□□□ 0.69
LSM1-203ENST00000520755 SRCIN1Q9C0H9 1055 aa19.35■□□□□ 0.69
LSM1-203ENST00000520755 CHRNA5P30532 468 aa19.34■□□□□ 0.69
LSM1-203ENST00000520755 PDE6BP35913 854 aa19.34■□□□□ 0.69
LSM1-203ENST00000520755 ITPRIPQ8IWB1 547 aa19.34■□□□□ 0.69
LSM1-203ENST00000520755 BRCA1P38398 1863 aaKnown RBP19.34■□□□□ 0.69
LSM1-203ENST00000520755 A0A0G2JLW4 131 aa19.33■□□□□ 0.68
LSM1-203ENST00000520755 ALDH1L1O75891 902 aa19.33■□□□□ 0.68
LSM1-203ENST00000520755 PCCAP05165 728 aaPredicted RBP19.33■□□□□ 0.68
LSM1-203ENST00000520755 DPEP1P16444 411 aa19.33■□□□□ 0.68
LSM1-203ENST00000520755 TGFB2P61812 414 aa19.33■□□□□ 0.68
LSM1-203ENST00000520755 GCKRQ14397 625 aa19.33■□□□□ 0.68
LSM1-203ENST00000520755 C2CD5Q86YS7 1000 aa19.33■□□□□ 0.68
LSM1-203ENST00000520755 ZBTB38Q8NAP3 1195 aaPredicted RBP19.33■□□□□ 0.68
LSM1-203ENST00000520755 HCLS1P14317 486 aaPredicted RBP19.32■□□□□ 0.68
LSM1-203ENST00000520755 WWC3Q9ULE0 1092 aa19.32■□□□□ 0.68
LSM1-203ENST00000520755 RIC1Q4ADV7 1423 aa19.32■□□□□ 0.68
LSM1-203ENST00000520755 H0YIN7 160 aa19.31■□□□□ 0.68
LSM1-203ENST00000520755 IRS4O14654 1257 aaPredicted RBP19.31■□□□□ 0.68
LSM1-203ENST00000520755 UBE3BQ7Z3V4 1068 aa19.31■□□□□ 0.68
LSM1-203ENST00000520755 MEIS3Q99687 375 aa19.31■□□□□ 0.68
LSM1-203ENST00000520755 SLC10A5Q5PT55 438 aa19.3■□□□□ 0.68
LSM1-203ENST00000520755 C3orf67Q6ZVT6 689 aa19.3■□□□□ 0.68
LSM1-203ENST00000520755 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
LSM1-203ENST00000520755 NLRP3Q96P20 1036 aa19.3■□□□□ 0.68
LSM1-203ENST00000520755 USP44Q9H0E7 712 aa19.3■□□□□ 0.68
LSM1-203ENST00000520755 UTYO14607 1347 aa19.29■□□□□ 0.68
LSM1-203ENST00000520755 H7C1W4 665 aa19.29■□□□□ 0.68
LSM1-203ENST00000520755 ZBTB7BO15156 539 aaPredicted RBP19.29■□□□□ 0.68
LSM1-203ENST00000520755 CASP7P55210 303 aa19.29■□□□□ 0.68
LSM1-203ENST00000520755 C9orf78Q9NZ63 289 aaPredicted RBP19.29■□□□□ 0.68
LSM1-203ENST00000520755 DDX19BQ9UMR2 479 aa19.29■□□□□ 0.68
LSM1-203ENST00000520755 PDZRN3Q9UPQ7 1066 aa19.29■□□□□ 0.68
LSM1-203ENST00000520755 SPEF2Q9C093 1822 aa19.29■□□□□ 0.68
LSM1-203ENST00000520755 CDHR2Q9BYE9 1310 aa19.28■□□□□ 0.68
LSM1-203ENST00000520755 GRM8O00222 908 aa19.28■□□□□ 0.68
LSM1-203ENST00000520755 NBPF7P0C2Y1 421 aaPredicted RBP19.28■□□□□ 0.68
LSM1-203ENST00000520755 KCNA3P22001 575 aa19.28■□□□□ 0.68
LSM1-203ENST00000520755 PELP1Q8IZL8 1130 aaKnown RBP19.28■□□□□ 0.68
LSM1-203ENST00000520755 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.68
LSM1-203ENST00000520755 TAF1P21675 1872 aa19.28■□□□□ 0.68
LSM1-203ENST00000520755 KLRG2A4D1S0 409 aaPredicted RBP19.27■□□□□ 0.68
LSM1-203ENST00000520755 SRGNP10124 158 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms