RNA–Protein interactions for RNA: ENST00000520717.1

SNTB1-205, Transcript of syntrophin beta 1, humanhuman

TSL 2

Gene SNTB1, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-205ENST00000520717 DICER1Q9UPY3 1922 aaKnown RBP38.06■■■■□ 3.68
SNTB1-205ENST00000520717 GNAI1P63096 354 aa38.05■■■■□ 3.68
SNTB1-205ENST00000520717 HSP90AB3PQ58FF7 597 aa38.05■■■■□ 3.68
SNTB1-205ENST00000520717 ANKRD36CQ5JPF3 1778 aa38.05■■■■□ 3.68
SNTB1-205ENST00000520717 DUSP27Q5VZP5 1158 aa38.04■■■■□ 3.68
SNTB1-205ENST00000520717 RBM46Q8TBY0 533 aaKnown RBP38.04■■■■□ 3.68
SNTB1-205ENST00000520717 RPGRQ92834 1020 aaKnown RBP38.03■■■■□ 3.68
SNTB1-205ENST00000520717 UTP14AQ9BVJ6 771 aaKnown RBP38.02■■■■□ 3.68
SNTB1-205ENST00000520717 DBF4Q9UBU7 674 aaPredicted RBP38.02■■■■□ 3.68
SNTB1-205ENST00000520717 RNF123Q5XPI4 1314 aa38.01■■■■□ 3.68
SNTB1-205ENST00000520717 ANP32CO43423 234 aa38■■■■□ 3.67
SNTB1-205ENST00000520717 DPY19L2Q6NUT2 758 aa38■■■■□ 3.67
SNTB1-205ENST00000520717 RTKN2Q8IZC4 609 aa38■■■■□ 3.67
SNTB1-205ENST00000520717 HOXA10P31260 410 aaPredicted RBP37.99■■■■□ 3.67
SNTB1-205ENST00000520717 FKBP4Q02790 459 aaKnown RBP eCLIP37.99■■■■□ 3.67
SNTB1-205ENST00000520717 OLFM4Q6UX06 510 aa37.99■■■■□ 3.67
SNTB1-205ENST00000520717 TCIRG1Q13488 830 aa37.98■■■■□ 3.67
SNTB1-205ENST00000520717 NLRP10Q86W26 655 aa37.97■■■■□ 3.67
SNTB1-205ENST00000520717 HYPKQ9NX55 129 aa37.97■■■■□ 3.67
SNTB1-205ENST00000520717 VEGFAP15692 232 aaPredicted RBP37.96■■■■□ 3.67
SNTB1-205ENST00000520717 RBM17Q96I25 401 aaKnown RBP37.96■■■■□ 3.67
SNTB1-205ENST00000520717 SLC10A5Q5PT55 438 aa37.95■■■■□ 3.67
SNTB1-205ENST00000520717 C3orf67Q6ZVT6 689 aa37.95■■■■□ 3.67
SNTB1-205ENST00000520717 PLBD2Q8NHP8 589 aa37.95■■■■□ 3.67
SNTB1-205ENST00000520717 NLRP3Q96P20 1036 aa37.95■■■■□ 3.67
SNTB1-205ENST00000520717 MRS2Q9HD23 443 aa37.95■■■■□ 3.67
SNTB1-205ENST00000520717 WDR90Q96KV7 1748 aa37.95■■■■□ 3.67
SNTB1-205ENST00000520717 FSTL1Q12841 308 aa37.94■■■■□ 3.66
SNTB1-205ENST00000520717 CRAMP1Q96RY5 1269 aa37.94■■■■□ 3.66
SNTB1-205ENST00000520717 ANKRD13DQ6ZTN6 518 aa37.93■■■■□ 3.66
SNTB1-205ENST00000520717 SNED1Q8TER0 1413 aa37.93■■■■□ 3.66
SNTB1-205ENST00000520717 CC2D2BQ6DHV5 1058 aa37.92■■■■□ 3.66
SNTB1-205ENST00000520717 ZNF277Q9NRM2 450 aaPredicted RBP37.92■■■■□ 3.66
SNTB1-205ENST00000520717 APLP1P51693 650 aa37.91■■■■□ 3.66
SNTB1-205ENST00000520717 CCDC27Q2M243 656 aa37.9■■■■□ 3.66
SNTB1-205ENST00000520717 TRMT112Q9UI30 125 aaKnown RBP37.9■■■■□ 3.66
SNTB1-205ENST00000520717 ELL2O00472 640 aaPredicted RBP37.89■■■■□ 3.66
SNTB1-205ENST00000520717 PSMD1Q99460 953 aa37.89■■■■□ 3.66
SNTB1-205ENST00000520717 SH3TC1Q8TE82 1336 aa37.88■■■■□ 3.66
SNTB1-205ENST00000520717 PPEF1O14829 653 aaPredicted RBP37.88■■■■□ 3.65
SNTB1-205ENST00000520717 SMC1BQ8NDV3 1235 aa37.88■■■■□ 3.65
SNTB1-205ENST00000520717 SYNE4Q8N205 404 aa37.87■■■■□ 3.65
SNTB1-205ENST00000520717 C8orf58Q8NAV2 365 aa37.87■■■■□ 3.65
SNTB1-205ENST00000520717 POTECB2RU33 542 aa37.86■■■■□ 3.65
SNTB1-205ENST00000520717 IARSP41252 1262 aaKnown RBP37.86■■■■□ 3.65
SNTB1-205ENST00000520717 GRIPAP1Q4V328 841 aa37.86■■■■□ 3.65
SNTB1-205ENST00000520717 HCLS1P14317 486 aaPredicted RBP37.85■■■■□ 3.65
SNTB1-205ENST00000520717 ISCA1Q9BUE6 129 aa37.85■■■■□ 3.65
SNTB1-205ENST00000520717 LAMB2P55268 1798 aa37.84■■■■□ 3.65
SNTB1-205ENST00000520717 DDNO94850 711 aaPredicted RBP37.84■■■■□ 3.65
SNTB1-205ENST00000520717 WWC1Q8IX03 1113 aa37.84■■■■□ 3.65
SNTB1-205ENST00000520717 CHMP4AQ9BY43 222 aa37.84■■■■□ 3.65
SNTB1-205ENST00000520717 GOLGA2Q08379 1002 aa37.83■■■■□ 3.65
SNTB1-205ENST00000520717 NCBP3Q53F19 620 aaKnown RBP37.82■■■■□ 3.64
SNTB1-205ENST00000520717 ABCC4O15439 1325 aa37.82■■■■□ 3.64
SNTB1-205ENST00000520717 ATP5J2-PTCD1G3V325 749 aa37.8■■■■□ 3.64
SNTB1-205ENST00000520717 TCERG1O14776 1098 aaKnown RBP37.8■■■■□ 3.64
SNTB1-205ENST00000520717 TSR2Q969E8 191 aaKnown RBP37.8■■■■□ 3.64
SNTB1-205ENST00000520717 PHAXQ9H814 394 aaKnown RBP37.8■■■■□ 3.64
SNTB1-205ENST00000520717 CCDC30Q5VVM6 783 aa37.79■■■■□ 3.64
SNTB1-205ENST00000520717 RIC3Q7Z5B4 369 aa37.79■■■■□ 3.64
SNTB1-205ENST00000520717 ZNF428Q96B54 188 aa37.79■■■■□ 3.64
SNTB1-205ENST00000520717 TMX4Q9H1E5 349 aaPredicted RBP37.79■■■■□ 3.64
SNTB1-205ENST00000520717 ZNF541Q9H0D2 1346 aa37.79■■■■□ 3.64
SNTB1-205ENST00000520717 SLC51AQ86UW1 340 aa37.78■■■■□ 3.64
SNTB1-205ENST00000520717 ATP6V0A2Q9Y487 856 aa37.78■■■■□ 3.64
SNTB1-205ENST00000520717 TRIM28Q13263 835 aaKnown RBP37.77■■■■□ 3.64
SNTB1-205ENST00000520717 TSPYL6Q8N831 410 aa37.77■■■■□ 3.64
SNTB1-205ENST00000520717 JDP2Q8WYK2 163 aa37.77■■■■□ 3.64
SNTB1-205ENST00000520717 L3MBTL3Q96JM7 780 aaPredicted RBP37.77■■■■□ 3.64
SNTB1-205ENST00000520717 IL16Q14005 1332 aa37.77■■■■□ 3.64
SNTB1-205ENST00000520717 DDX46Q7L014 1031 aaKnown RBP37.76■■■■□ 3.64
SNTB1-205ENST00000520717 DDX60Q8IY21 1712 aaKnown RBP37.75■■■■□ 3.63
SNTB1-205ENST00000520717 IQCA1LA6NCM1 817 aa37.75■■■■□ 3.63
SNTB1-205ENST00000520717 FZD9O00144 591 aa37.75■■■■□ 3.63
SNTB1-205ENST00000520717 FAM89AQ96GI7 184 aa37.75■■■■□ 3.63
SNTB1-205ENST00000520717 BBOX1O75936 387 aa37.74■■■■□ 3.63
SNTB1-205ENST00000520717 GRAPQ13588 217 aa37.72■■■■□ 3.63
SNTB1-205ENST00000520717 GRAPLQ8TC17 118 aaPredicted RBP37.72■■■■□ 3.63
SNTB1-205ENST00000520717 COL4A5P29400 1685 aa37.72■■■■□ 3.63
SNTB1-205ENST00000520717 SCN4AP35499 1836 aa37.71■■■■□ 3.63
SNTB1-205ENST00000520717 DDX58O95786 925 aaKnown RBP37.71■■■■□ 3.63
SNTB1-205ENST00000520717 LARGE2Q8N3Y3 721 aa37.71■■■■□ 3.63
SNTB1-205ENST00000520717 SP8Q8IXZ3 490 aa37.7■■■■□ 3.63
SNTB1-205ENST00000520717 MYD88Q99836 296 aa37.69■■■■□ 3.62
SNTB1-205ENST00000520717 TWISTNBQ3B726 338 aaPredicted RBP37.68■■■■□ 3.62
SNTB1-205ENST00000520717 RTL5Q5HYW3 569 aaPredicted RBP37.68■■■■□ 3.62
SNTB1-205ENST00000520717 STK31Q9BXU1 1019 aa37.68■■■■□ 3.62
SNTB1-205ENST00000520717 IRS4O14654 1257 aaPredicted RBP37.67■■■■□ 3.62
SNTB1-205ENST00000520717 EIF6P56537 245 aaKnown RBP37.67■■■■□ 3.62
SNTB1-205ENST00000520717 SF3B3Q15393 1217 aaKnown RBP37.67■■■■□ 3.62
SNTB1-205ENST00000520717 TMC4Q7Z404 712 aa37.67■■■■□ 3.62
SNTB1-205ENST00000520717 GPC2Q8N158 579 aa37.67■■■■□ 3.62
SNTB1-205ENST00000520717 DNAJC5GQ8N7S2 189 aa37.67■■■■□ 3.62
SNTB1-205ENST00000520717 ZBTB38Q8NAP3 1195 aaPredicted RBP37.66■■■■□ 3.62
SNTB1-205ENST00000520717 SUPT20HQ8NEM7 779 aa37.66■■■■□ 3.62
SNTB1-205ENST00000520717 VPS33BQ9H267 617 aa37.66■■■■□ 3.62
SNTB1-205ENST00000520717 TAF1DQ9H5J8 278 aaPredicted RBP37.66■■■■□ 3.62
SNTB1-205ENST00000520717 PPIP5K2O43314 1243 aa37.65■■■■□ 3.62
SNTB1-205ENST00000520717 HTRA3P83110 453 aa37.65■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms