RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 DZIP3Q86Y13 1208 aaKnown RBP10.9□□□□□ -0.66
CSMD1-209ENST00000520630 USP16Q9Y5T5 823 aa10.9□□□□□ -0.66
CSMD1-209ENST00000520630 PAPPA2Q9BXP8 1791 aa10.9□□□□□ -0.67
CSMD1-209ENST00000520630 ABCC12Q96J65 1359 aa10.9□□□□□ -0.67
CSMD1-209ENST00000520630 COL3A1P02461 1466 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-209ENST00000520630 HIRAP54198 1017 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-209ENST00000520630 USP50Q70EL3 339 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-209ENST00000520630 NBPF5PQ86XG9 351 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-209ENST00000520630 HHIPL1Q96JK4 782 aa10.89□□□□□ -0.67
CSMD1-209ENST00000520630 GLIS2Q9BZE0 524 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-209ENST00000520630 PGAP2Q9UHJ9 254 aa10.89□□□□□ -0.67
CSMD1-209ENST00000520630 LRRC37AA6NMS7 1700 aa10.88□□□□□ -0.67
CSMD1-209ENST00000520630 FAM155AB1AL88 458 aaPredicted RBP10.88□□□□□ -0.67
CSMD1-209ENST00000520630 NBPF26B4DH59 902 aa10.88□□□□□ -0.67
CSMD1-209ENST00000520630 CA12O43570 354 aa10.88□□□□□ -0.67
CSMD1-209ENST00000520630 CELF2O95319 508 aaKnown RBP10.88□□□□□ -0.67
CSMD1-209ENST00000520630 CRY2Q49AN0 593 aa10.88□□□□□ -0.67
CSMD1-209ENST00000520630 PRPF38BQ5VTL8 546 aaKnown RBP10.88□□□□□ -0.67
CSMD1-209ENST00000520630 NBPF10Q6P3W6 841 aaKnown RBP10.88□□□□□ -0.67
CSMD1-209ENST00000520630 CLEC4GQ6UXB4 293 aa10.88□□□□□ -0.67
CSMD1-209ENST00000520630 NBPF15Q8N660 670 aa10.88□□□□□ -0.67
CSMD1-209ENST00000520630 LAMB1P07942 1786 aa10.88□□□□□ -0.67
CSMD1-209ENST00000520630 ZNF646O15015 1829 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-209ENST00000520630 HLFQ16534 295 aa10.87□□□□□ -0.67
CSMD1-209ENST00000520630 MORC1Q86VD1 984 aa10.87□□□□□ -0.67
CSMD1-209ENST00000520630 TTC5Q8N0Z6 440 aa10.87□□□□□ -0.67
CSMD1-209ENST00000520630 TEX13AQ9BXU3 409 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-209ENST00000520630 GPRC5DQ9NZD1 345 aa10.87□□□□□ -0.67
CSMD1-209ENST00000520630 CEMIPQ8WUJ3 1361 aa10.87□□□□□ -0.67
CSMD1-209ENST00000520630 DDX60Q8IY21 1712 aaKnown RBP10.87□□□□□ -0.67
CSMD1-209ENST00000520630 KIAA0100Q14667 2235 aaKnown RBP10.86□□□□□ -0.67
CSMD1-209ENST00000520630 DUOX1Q9NRD9 1551 aa10.86□□□□□ -0.67
CSMD1-209ENST00000520630 RIC1Q4ADV7 1423 aa10.86□□□□□ -0.67
CSMD1-209ENST00000520630 SHTN1A0MZ66 631 aa10.86□□□□□ -0.67
CSMD1-209ENST00000520630 FAM177BA6PVY3 158 aa10.86□□□□□ -0.67
CSMD1-209ENST00000520630 EIF6P56537 245 aaKnown RBP10.86□□□□□ -0.67
CSMD1-209ENST00000520630 JDP2Q8WYK2 163 aa10.86□□□□□ -0.67
CSMD1-209ENST00000520630 POLR3GLQ9BT43 218 aa10.86□□□□□ -0.67
CSMD1-209ENST00000520630 NPHP1O15259 732 aa10.85□□□□□ -0.67
CSMD1-209ENST00000520630 LMOD1P29536 600 aaPredicted RBP10.85□□□□□ -0.67
CSMD1-209ENST00000520630 ALDH1B1P30837 517 aa10.85□□□□□ -0.67
CSMD1-209ENST00000520630 FMNL2Q96PY5 1086 aa10.85□□□□□ -0.67
CSMD1-209ENST00000520630 NIP7Q9Y221 180 aaKnown RBP eCLIP10.85□□□□□ -0.67
CSMD1-209ENST00000520630 COL4A1P02462 1669 aa10.85□□□□□ -0.67
CSMD1-209ENST00000520630 HOXA10P31260 410 aaPredicted RBP10.84□□□□□ -0.67
CSMD1-209ENST00000520630 CXCL9Q07325 125 aa10.84□□□□□ -0.67
CSMD1-209ENST00000520630 AMER1Q5JTC6 1135 aaPredicted RBP10.84□□□□□ -0.67
CSMD1-209ENST00000520630 TPTE2Q6XPS3 522 aa10.84□□□□□ -0.67
CSMD1-209ENST00000520630 C3orf67Q6ZVT6 689 aa10.84□□□□□ -0.67
CSMD1-209ENST00000520630 NUTM1Q86Y26 1132 aa10.84□□□□□ -0.67
CSMD1-209ENST00000520630 TRPM4Q8TD43 1214 aa10.84□□□□□ -0.67
CSMD1-209ENST00000520630 ADARB2Q9NS39 739 aaKnown RBP10.84□□□□□ -0.67
CSMD1-209ENST00000520630 NPC1L1Q9UHC9 1359 aa10.84□□□□□ -0.67
CSMD1-209ENST00000520630 LARGE2Q8N3Y3 721 aa10.83□□□□□ -0.68
CSMD1-209ENST00000520630 GMPSP49915 693 aaPredicted RBP10.82□□□□□ -0.68
CSMD1-209ENST00000520630 NOGQ13253 232 aa10.82□□□□□ -0.68
CSMD1-209ENST00000520630 AOC3Q16853 763 aa10.82□□□□□ -0.68
CSMD1-209ENST00000520630 ZNF408Q9H9D4 720 aa10.82□□□□□ -0.68
CSMD1-209ENST00000520630 RNF186Q9NXI6 227 aa10.82□□□□□ -0.68
CSMD1-209ENST00000520630 CEP290O15078 2479 aa10.81□□□□□ -0.68
CSMD1-209ENST00000520630 GNAT3A8MTJ3 354 aa10.81□□□□□ -0.68
CSMD1-209ENST00000520630 RGL2O15211 777 aa10.81□□□□□ -0.68
CSMD1-209ENST00000520630 EGFRP00533 1210 aa10.81□□□□□ -0.68
CSMD1-209ENST00000520630 KIF23Q02241 960 aaPredicted RBP10.81□□□□□ -0.68
CSMD1-209ENST00000520630 TEFQ10587 303 aa10.81□□□□□ -0.68
CSMD1-209ENST00000520630 CC2D2BQ6DHV5 1058 aa10.81□□□□□ -0.68
CSMD1-209ENST00000520630 PHACTR3Q96KR7 559 aa10.81□□□□□ -0.68
CSMD1-209ENST00000520630 COL6A3P12111 3177 aa10.81□□□□□ -0.68
CSMD1-209ENST00000520630 KIF7Q2M1P5 1343 aa10.81□□□□□ -0.68
CSMD1-209ENST00000520630 UBN2Q6ZU65 1347 aa10.81□□□□□ -0.68
CSMD1-209ENST00000520630 YDJCA8MPS7 323 aa10.8□□□□□ -0.68
CSMD1-209ENST00000520630 TCERG1O14776 1098 aaKnown RBP10.8□□□□□ -0.68
CSMD1-209ENST00000520630 TRPA1O75762 1119 aa10.8□□□□□ -0.68
CSMD1-209ENST00000520630 HUNKP57058 714 aa10.8□□□□□ -0.68
CSMD1-209ENST00000520630 USP48Q86UV5 1035 aa10.8□□□□□ -0.68
CSMD1-209ENST00000520630 SAGE1Q9NXZ1 904 aa10.8□□□□□ -0.68
CSMD1-209ENST00000520630 BTBD11A6QL63 1104 aa10.79□□□□□ -0.68
CSMD1-209ENST00000520630 PPIP5K2O43314 1243 aa10.79□□□□□ -0.68
CSMD1-209ENST00000520630 DIAPH1O60610 1272 aaKnown RBP10.79□□□□□ -0.68
CSMD1-209ENST00000520630 RGMBQ6NW40 437 aa10.79□□□□□ -0.68
CSMD1-209ENST00000520630 CDC37L1Q7L3B6 337 aa10.79□□□□□ -0.68
CSMD1-209ENST00000520630 NIM1KQ8IY84 436 aa10.79□□□□□ -0.68
CSMD1-209ENST00000520630 ZC3H15Q8WU90 426 aaKnown RBP10.79□□□□□ -0.68
CSMD1-209ENST00000520630 CRAMP1Q96RY5 1269 aa10.79□□□□□ -0.68
CSMD1-209ENST00000520630 CSRNP1Q96S65 589 aa10.79□□□□□ -0.68
CSMD1-209ENST00000520630 HPS5Q9UPZ3 1129 aa10.79□□□□□ -0.68
CSMD1-209ENST00000520630 ZNF652Q9Y2D9 606 aa10.79□□□□□ -0.68
CSMD1-209ENST00000520630 PPEF1O14829 653 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-209ENST00000520630 SUSD4Q5VX71 490 aa10.78□□□□□ -0.68
CSMD1-209ENST00000520630 RTFDC1Q9BY42 306 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-209ENST00000520630 ZNRF3Q9ULT6 936 aa10.78□□□□□ -0.68
CSMD1-209ENST00000520630 TRIOBPQ9H2D6 2365 aa10.77□□□□□ -0.68
CSMD1-209ENST00000520630 RAD17O75943 681 aa10.77□□□□□ -0.69
CSMD1-209ENST00000520630 NTSR2O95665 410 aa10.77□□□□□ -0.69
CSMD1-209ENST00000520630 SNRPA1P09661 255 aaKnown RBP10.77□□□□□ -0.69
CSMD1-209ENST00000520630 HSPA5P11021 654 aaKnown RBP10.77□□□□□ -0.69
CSMD1-209ENST00000520630 HABP4Q5JVS0 413 aaKnown RBP10.77□□□□□ -0.69
CSMD1-209ENST00000520630 TTLL7Q6ZT98 887 aa10.77□□□□□ -0.69
CSMD1-209ENST00000520630 CTU1Q7Z7A3 348 aaKnown RBP10.77□□□□□ -0.69
CSMD1-209ENST00000520630 CNOT7Q9UIV1 285 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms