RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	APLP1	P51693	650 aa		10.68	□□□□□ -0.7
CTNNA1-223	ENST00000520520	SULT6B1	Q6IMI4	303 aa		10.68	□□□□□ -0.7
CTNNA1-223	ENST00000520520	TMEM57	Q8N5G2	664 aa		10.68	□□□□□ -0.7
CTNNA1-223	ENST00000520520	TNN	Q9UQP3	1299 aa		10.68	□□□□□ -0.7
CTNNA1-223	ENST00000520520	MYH14	Q7Z406	1995 aa	Known RBP	10.67	□□□□□ -0.7
CTNNA1-223	ENST00000520520	TOMM70	O94826	608 aa		10.67	□□□□□ -0.7
CTNNA1-223	ENST00000520520	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.67	□□□□□ -0.7
CTNNA1-223	ENST00000520520	AMOT	Q4VCS5	1084 aa		10.67	□□□□□ -0.7
CTNNA1-223	ENST00000520520	RC3H1	Q5TC82	1133 aa	Known RBP	10.67	□□□□□ -0.7
CTNNA1-223	ENST00000520520	CHD1L	Q86WJ1	897 aa		10.67	□□□□□ -0.7
CTNNA1-223	ENST00000520520	RNF181	Q9P0P0	153 aa		10.67	□□□□□ -0.7
CTNNA1-223	ENST00000520520	GOLGA6L22	H0YM25	854 aa		10.66	□□□□□ -0.7
CTNNA1-223	ENST00000520520	DDR1	Q08345	913 aa		10.66	□□□□□ -0.7
CTNNA1-223	ENST00000520520	DALRD3	Q5D0E6	543 aa	Known RBP	10.66	□□□□□ -0.7
CTNNA1-223	ENST00000520520	PIM2	Q9P1W9	311 aa		10.66	□□□□□ -0.7
CTNNA1-223	ENST00000520520	KCP	Q6ZWJ8	1503 aa		10.66	□□□□□ -0.7
CTNNA1-223	ENST00000520520	ABCC4	O15439	1325 aa		10.65	□□□□□ -0.7
CTNNA1-223	ENST00000520520	TJP1	Q07157	1748 aa		10.65	□□□□□ -0.7
CTNNA1-223	ENST00000520520	ZPR1	O75312	459 aa		10.65	□□□□□ -0.7
CTNNA1-223	ENST00000520520	KCNA3	P22001	575 aa		10.65	□□□□□ -0.7
CTNNA1-223	ENST00000520520	PRKAR2B	P31323	418 aa		10.65	□□□□□ -0.7
CTNNA1-223	ENST00000520520	MRE11	P49959	708 aa		10.65	□□□□□ -0.7
CTNNA1-223	ENST00000520520	USPL1	Q5W0Q7	1092 aa		10.65	□□□□□ -0.7
CTNNA1-223	ENST00000520520	RRAGC	Q9HB90	399 aa		10.65	□□□□□ -0.7
CTNNA1-223	ENST00000520520	BRCA1	P38398	1863 aa	Known RBP	10.65	□□□□□ -0.7
CTNNA1-223	ENST00000520520	USP42	Q9H9J4	1324 aa	Known RBP	10.64	□□□□□ -0.71
CTNNA1-223	ENST00000520520	CDC45	O75419	566 aa		10.64	□□□□□ -0.71
CTNNA1-223	ENST00000520520	HSP90AA1	P07900	732 aa	Known RBP	10.64	□□□□□ -0.71
CTNNA1-223	ENST00000520520	HMOX1	P09601	288 aa		10.64	□□□□□ -0.71
CTNNA1-223	ENST00000520520	RASSF7	Q02833	373 aa		10.64	□□□□□ -0.71
CTNNA1-223	ENST00000520520	SLC39A6	Q13433	755 aa		10.64	□□□□□ -0.71
CTNNA1-223	ENST00000520520	CASC1	Q6TDU7	716 aa		10.64	□□□□□ -0.71
CTNNA1-223	ENST00000520520	DNAJC10	Q8IXB1	793 aa		10.64	□□□□□ -0.71
CTNNA1-223	ENST00000520520	ZNF831	Q5JPB2	1677 aa		10.63	□□□□□ -0.71
CTNNA1-223	ENST00000520520	BICDL1	Q6ZP65	573 aa		10.63	□□□□□ -0.71
CTNNA1-223	ENST00000520520	LGR6	Q9HBX8	967 aa		10.63	□□□□□ -0.71
CTNNA1-223	ENST00000520520	WDR90	Q96KV7	1748 aa		10.63	□□□□□ -0.71
CTNNA1-223	ENST00000520520	ARFGEF1	Q9Y6D6	1849 aa		10.63	□□□□□ -0.71
CTNNA1-223	ENST00000520520	FSD2	A1L4K1	749 aa		10.62	□□□□□ -0.71
CTNNA1-223	ENST00000520520	POLRMT	O00411	1230 aa	Known RBP	10.62	□□□□□ -0.71
CTNNA1-223	ENST00000520520	TRAK2	O60296	914 aa		10.62	□□□□□ -0.71
CTNNA1-223	ENST00000520520	DCAF8	Q5TAQ9	597 aa		10.62	□□□□□ -0.71
CTNNA1-223	ENST00000520520	INTS5	Q6P9B9	1019 aa	Known RBP	10.62	□□□□□ -0.71
CTNNA1-223	ENST00000520520	MRPL50	Q8N5N7	158 aa	Known RBP	10.62	□□□□□ -0.71
CTNNA1-223	ENST00000520520	LNPK	Q9C0E8	428 aa		10.62	□□□□□ -0.71
CTNNA1-223	ENST00000520520	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNNA1-223	ENST00000520520	PLEKHG2	Q9H7P9	1386 aa		10.62	□□□□□ -0.71
CTNNA1-223	ENST00000520520	SCN11A	Q9UI33	1791 aa		10.62	□□□□□ -0.71
CTNNA1-223	ENST00000520520	DNAJC5G	Q8N7S2	189 aa		10.61	□□□□□ -0.71
CTNNA1-223	ENST00000520520	RBM46	Q8TBY0	533 aa	Known RBP	10.61	□□□□□ -0.71
CTNNA1-223	ENST00000520520	SLC52A2	Q9HAB3	445 aa		10.61	□□□□□ -0.71
CTNNA1-223	ENST00000520520		K7ELQ4	463 aa	Predicted RBP	10.6	□□□□□ -0.71
CTNNA1-223	ENST00000520520	IL13	P35225	146 aa		10.6	□□□□□ -0.71
CTNNA1-223	ENST00000520520	RABEP1	Q15276	862 aa		10.6	□□□□□ -0.71
CTNNA1-223	ENST00000520520	TWISTNB	Q3B726	338 aa	Predicted RBP	10.6	□□□□□ -0.71
CTNNA1-223	ENST00000520520	AKAP4	Q5JQC9	854 aa		10.6	□□□□□ -0.71
CTNNA1-223	ENST00000520520	ANKRD45	Q5TZF3	282 aa		10.6	□□□□□ -0.71
CTNNA1-223	ENST00000520520	CCDC24	Q8N4L8	307 aa		10.6	□□□□□ -0.71
CTNNA1-223	ENST00000520520	ZBTB1	Q9Y2K1	713 aa		10.6	□□□□□ -0.71
CTNNA1-223	ENST00000520520	COL15A1	P39059	1388 aa		10.6	□□□□□ -0.71
CTNNA1-223	ENST00000520520	DLG5	Q8TDM6	1919 aa		10.6	□□□□□ -0.71
CTNNA1-223	ENST00000520520	SOS1	Q07889	1333 aa	Predicted RBP	10.59	□□□□□ -0.71
CTNNA1-223	ENST00000520520	AFDN	P55196	1824 aa	Known RBP	10.59	□□□□□ -0.71
CTNNA1-223	ENST00000520520	ZBTB7B	O15156	539 aa	Predicted RBP	10.59	□□□□□ -0.71
CTNNA1-223	ENST00000520520	RNMT	O43148	476 aa	Known RBP	10.59	□□□□□ -0.71
CTNNA1-223	ENST00000520520	VAMP4	O75379	141 aa		10.59	□□□□□ -0.71
CTNNA1-223	ENST00000520520	ZNF853	P0CG23	659 aa		10.59	□□□□□ -0.71
CTNNA1-223	ENST00000520520	TM4SF1	P30408	202 aa		10.59	□□□□□ -0.71
CTNNA1-223	ENST00000520520	NFIX	Q14938	502 aa		10.59	□□□□□ -0.71
CTNNA1-223	ENST00000520520	ANP32B	Q92688	251 aa	Known RBP	10.59	□□□□□ -0.71
CTNNA1-223	ENST00000520520	PCNT	O95613	3336 aa		10.59	□□□□□ -0.71
CTNNA1-223	ENST00000520520	PTPRC	P08575	1304 aa		10.58	□□□□□ -0.71
CTNNA1-223	ENST00000520520	SBF1	O95248	1867 aa		10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	ADAMTS7	Q9UKP4	1686 aa		10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	SERPINB2	P05120	415 aa		10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	CYP19A1	P11511	503 aa	Predicted RBP	10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	DDIT3	P35638	169 aa		10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	RAB3GAP1	Q15042	981 aa		10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	MTHFSD	Q2M296	383 aa	Known RBP	10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	INTS3	Q68E01	1043 aa	Known RBP	10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	C2CD5	Q86YS7	1000 aa		10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	KLRG1	Q96E93	195 aa		10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	FAM212A	Q96EL1	285 aa		10.58	□□□□□ -0.72
CTNNA1-223	ENST00000520520	CARMIL3	Q8ND23	1372 aa		10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	NPHP1	O15259	732 aa		10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	HMMR	O75330	724 aa		10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	FSTL1	Q12841	308 aa		10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	TTC5	Q8N0Z6	440 aa		10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	SMC1B	Q8NDV3	1235 aa		10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	TRIM44	Q96DX7	344 aa	Predicted RBP	10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	MBIP	Q9NS73	344 aa		10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	NARF	Q9UHQ1	456 aa		10.57	□□□□□ -0.72
CTNNA1-223	ENST00000520520	TIAM2	Q8IVF5	1701 aa		10.56	□□□□□ -0.72
CTNNA1-223	ENST00000520520	C19orf67	A6NJJ6	358 aa		10.56	□□□□□ -0.72
CTNNA1-223	ENST00000520520	ECM2	O94769	699 aa	Predicted RBP	10.56	□□□□□ -0.72

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