RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 TCIRG1Q13488 830 aa18.58■□□□□ 0.56
R3HCC1-206ENST00000520480 ANKRD13DQ6ZTN6 518 aa18.58■□□□□ 0.56
R3HCC1-206ENST00000520480 C8orf58Q8NAV2 365 aa18.58■□□□□ 0.56
R3HCC1-206ENST00000520480 PLBD2Q8NHP8 589 aa18.58■□□□□ 0.56
R3HCC1-206ENST00000520480 CCDC88AQ3V6T2 1871 aa18.57■□□□□ 0.56
R3HCC1-206ENST00000520480 LTBP3Q9NS15 1303 aa18.56■□□□□ 0.56
R3HCC1-206ENST00000520480 NLRP10Q86W26 655 aa18.56■□□□□ 0.56
R3HCC1-206ENST00000520480 FAM9BQ8IZU0 186 aa18.56■□□□□ 0.56
R3HCC1-206ENST00000520480 RPGRQ92834 1020 aaKnown RBP18.56■□□□□ 0.56
R3HCC1-206ENST00000520480 TSR2Q969E8 191 aaKnown RBP18.56■□□□□ 0.56
R3HCC1-206ENST00000520480 TAOK3Q9H2K8 898 aa18.56■□□□□ 0.56
R3HCC1-206ENST00000520480 KDM2BQ8NHM5 1336 aa18.55■□□□□ 0.56
R3HCC1-206ENST00000520480 HOXA10P31260 410 aaPredicted RBP18.55■□□□□ 0.56
R3HCC1-206ENST00000520480 SLC10A5Q5PT55 438 aa18.55■□□□□ 0.56
R3HCC1-206ENST00000520480 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
R3HCC1-206ENST00000520480 C7orf43Q8WVR3 580 aa18.55■□□□□ 0.56
R3HCC1-206ENST00000520480 PRELPP51888 382 aa18.54■□□□□ 0.56
R3HCC1-206ENST00000520480 GOLGA2Q08379 1002 aa18.54■□□□□ 0.56
R3HCC1-206ENST00000520480 CCDC93Q567U6 631 aa18.54■□□□□ 0.56
R3HCC1-206ENST00000520480 WDR63Q8IWG1 891 aa18.54■□□□□ 0.56
R3HCC1-206ENST00000520480 NLRP3Q96P20 1036 aa18.54■□□□□ 0.56
R3HCC1-206ENST00000520480 TIAM2Q8IVF5 1701 aa18.54■□□□□ 0.56
R3HCC1-206ENST00000520480 RBM17Q96I25 401 aaKnown RBP18.53■□□□□ 0.56
R3HCC1-206ENST00000520480 TRMT112Q9UI30 125 aaKnown RBP18.53■□□□□ 0.56
R3HCC1-206ENST00000520480 SALL2Q9Y467 1007 aaPredicted RBP18.53■□□□□ 0.56
R3HCC1-206ENST00000520480 DICER1Q9UPY3 1922 aaKnown RBP18.53■□□□□ 0.56
R3HCC1-206ENST00000520480 SH3TC1Q8TE82 1336 aa18.52■□□□□ 0.56
R3HCC1-206ENST00000520480 KIF3CO14782 793 aa18.52■□□□□ 0.56
R3HCC1-206ENST00000520480 RIC3Q7Z5B4 369 aa18.52■□□□□ 0.56
R3HCC1-206ENST00000520480 RTKN2Q8IZC4 609 aa18.52■□□□□ 0.56
R3HCC1-206ENST00000520480 TSPYL6Q8N831 410 aa18.52■□□□□ 0.56
R3HCC1-206ENST00000520480 CRAMP1Q96RY5 1269 aa18.52■□□□□ 0.56
R3HCC1-206ENST00000520480 ISCA1Q9BUE6 129 aa18.52■□□□□ 0.56
R3HCC1-206ENST00000520480 CEP350Q5VT06 3117 aa18.52■□□□□ 0.55
R3HCC1-206ENST00000520480 TWISTNBQ3B726 338 aaPredicted RBP18.51■□□□□ 0.55
R3HCC1-206ENST00000520480 STK31Q9BXU1 1019 aa18.51■□□□□ 0.55
R3HCC1-206ENST00000520480 PHAXQ9H814 394 aaKnown RBP18.51■□□□□ 0.55
R3HCC1-206ENST00000520480 FANCIQ9NVI1 1328 aa18.5■□□□□ 0.55
R3HCC1-206ENST00000520480 DDX58O95786 925 aaKnown RBP18.5■□□□□ 0.55
R3HCC1-206ENST00000520480 TRIM28Q13263 835 aaKnown RBP18.5■□□□□ 0.55
R3HCC1-206ENST00000520480 CC2D2BQ6DHV5 1058 aa18.5■□□□□ 0.55
R3HCC1-206ENST00000520480 C3orf67Q6ZVT6 689 aa18.5■□□□□ 0.55
R3HCC1-206ENST00000520480 NMRK2Q9NPI5 230 aa18.5■□□□□ 0.55
R3HCC1-206ENST00000520480 ATP5J2-PTCD1G3V325 749 aa18.49■□□□□ 0.55
R3HCC1-206ENST00000520480 FKBP4Q02790 459 aaKnown RBP eCLIP18.49■□□□□ 0.55
R3HCC1-206ENST00000520480 GRIPAP1Q4V328 841 aa18.49■□□□□ 0.55
R3HCC1-206ENST00000520480 LAMB2P55268 1798 aa18.48■□□□□ 0.55
R3HCC1-206ENST00000520480 GLTPD2A6NH11 291 aa18.48■□□□□ 0.55
R3HCC1-206ENST00000520480 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
R3HCC1-206ENST00000520480 PPEF1O14829 653 aaPredicted RBP18.47■□□□□ 0.55
R3HCC1-206ENST00000520480 TOMM70O94826 608 aa18.47■□□□□ 0.55
R3HCC1-206ENST00000520480 DPY19L2Q6NUT2 758 aa18.47■□□□□ 0.55
R3HCC1-206ENST00000520480 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
R3HCC1-206ENST00000520480 SYNE4Q8N205 404 aa18.47■□□□□ 0.55
R3HCC1-206ENST00000520480 TMX4Q9H1E5 349 aaPredicted RBP18.47■□□□□ 0.55
R3HCC1-206ENST00000520480 MYH16Q9H6N6 1097 aa18.47■□□□□ 0.55
R3HCC1-206ENST00000520480 C16orf71Q8IYS4 520 aaPredicted RBP18.46■□□□□ 0.55
R3HCC1-206ENST00000520480 FAM89AQ96GI7 184 aa18.46■□□□□ 0.55
R3HCC1-206ENST00000520480 PSMD1Q99460 953 aa18.46■□□□□ 0.55
R3HCC1-206ENST00000520480 CACNA1FO60840 1977 aa18.46■□□□□ 0.55
R3HCC1-206ENST00000520480 DDX46Q7L014 1031 aaKnown RBP18.45■□□□□ 0.54
R3HCC1-206ENST00000520480 ZNF428Q96B54 188 aa18.45■□□□□ 0.54
R3HCC1-206ENST00000520480 MYD88Q99836 296 aa18.45■□□□□ 0.54
R3HCC1-206ENST00000520480 RRAGCQ9HB90 399 aa18.45■□□□□ 0.54
R3HCC1-206ENST00000520480 ZNF277Q9NRM2 450 aaPredicted RBP18.45■□□□□ 0.54
R3HCC1-206ENST00000520480 SNED1Q8TER0 1413 aa18.45■□□□□ 0.54
R3HCC1-206ENST00000520480 DDX60Q8IY21 1712 aaKnown RBP18.45■□□□□ 0.54
R3HCC1-206ENST00000520480 ABCC4O15439 1325 aa18.45■□□□□ 0.54
R3HCC1-206ENST00000520480 TCERG1O14776 1098 aaKnown RBP18.44■□□□□ 0.54
R3HCC1-206ENST00000520480 BBOX1O75936 387 aa18.44■□□□□ 0.54
R3HCC1-206ENST00000520480 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
R3HCC1-206ENST00000520480 HSP90B1P14625 803 aaKnown RBP18.44■□□□□ 0.54
R3HCC1-206ENST00000520480 KSR2Q6VAB6 950 aa18.44■□□□□ 0.54
R3HCC1-206ENST00000520480 CCDC191Q8NCU4 936 aa18.44■□□□□ 0.54
R3HCC1-206ENST00000520480 METTL22Q9BUU2 404 aaPredicted RBP18.44■□□□□ 0.54
R3HCC1-206ENST00000520480 MAP3K2Q9Y2U5 619 aa18.44■□□□□ 0.54
R3HCC1-206ENST00000520480 VEGFAP15692 232 aaPredicted RBP18.43■□□□□ 0.54
R3HCC1-206ENST00000520480 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
R3HCC1-206ENST00000520480 EXOSC9Q06265 439 aaKnown RBP18.43■□□□□ 0.54
R3HCC1-206ENST00000520480 ZBTB38Q8NAP3 1195 aaPredicted RBP18.43■□□□□ 0.54
R3HCC1-206ENST00000520480 CWC25Q9NXE8 425 aaPredicted RBP18.43■□□□□ 0.54
R3HCC1-206ENST00000520480 ATP6V0A2Q9Y487 856 aa18.43■□□□□ 0.54
R3HCC1-206ENST00000520480 PI4KAP2A4QPH2 592 aa18.42■□□□□ 0.54
R3HCC1-206ENST00000520480 CCER2I3L3R5 266 aa18.42■□□□□ 0.54
R3HCC1-206ENST00000520480 IRS4O14654 1257 aaPredicted RBP18.42■□□□□ 0.54
R3HCC1-206ENST00000520480 VAMP4O75379 141 aa18.42■□□□□ 0.54
R3HCC1-206ENST00000520480 PI4KAP1Q8N8J0 262 aa18.42■□□□□ 0.54
R3HCC1-206ENST00000520480 RBM46Q8TBY0 533 aaKnown RBP18.42■□□□□ 0.54
R3HCC1-206ENST00000520480 SPINK5Q9NQ38 1064 aaPredicted RBP18.42■□□□□ 0.54
R3HCC1-206ENST00000520480 WDR90Q96KV7 1748 aa18.41■□□□□ 0.54
R3HCC1-206ENST00000520480 NEXNQ0ZGT2 675 aa18.41■□□□□ 0.54
R3HCC1-206ENST00000520480 GRAPQ13588 217 aa18.41■□□□□ 0.54
R3HCC1-206ENST00000520480 SF3B3Q15393 1217 aaKnown RBP18.41■□□□□ 0.54
R3HCC1-206ENST00000520480 RTL5Q5HYW3 569 aaPredicted RBP18.41■□□□□ 0.54
R3HCC1-206ENST00000520480 TMC4Q7Z404 712 aa18.41■□□□□ 0.54
R3HCC1-206ENST00000520480 GRAPLQ8TC17 118 aaPredicted RBP18.41■□□□□ 0.54
R3HCC1-206ENST00000520480 PCCAP05165 728 aaPredicted RBP18.4■□□□□ 0.54
R3HCC1-206ENST00000520480 G2E3Q7L622 706 aa18.4■□□□□ 0.54
R3HCC1-206ENST00000520480 SP8Q8IXZ3 490 aa18.4■□□□□ 0.54
R3HCC1-206ENST00000520480 JDP2Q8WYK2 163 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms