RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 C6orf163Q5TEZ5 329 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 TSNARE1Q96NA8 513 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 EFCC1Q9HA90 598 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 TMOD2Q9NZR1 351 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 A0A087WZG4 1122 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 FERMT3Q86UX7 667 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 DZIP1Q86YF9 867 aaKnown RBP13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 C8orf76Q96K31 380 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 ANKIB1Q9P2G1 1089 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 CEBPAP49715 358 aaPredicted RBP13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 SSRP1Q08945 709 aaKnown RBP13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 UBE4AQ14139 1066 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 FAM177A1Q8N128 213 aaPredicted RBP13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 MKNK2Q9HBH9 465 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 SLC12A7Q9Y666 1083 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 TNIP1Q15025 636 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 PTPN14Q15678 1187 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 TTC22Q5TAA0 569 aa13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
ERGIC1-208ENST00000520399 BMP2KLQ5H9B9 411 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 SCLT1Q96NL6 688 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 TEX13AQ9BXU3 409 aaPredicted RBP13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 ANO10Q9NW15 660 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 ATP10BO94823 1461 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 PPIP5K1Q6PFW1 1433 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 TBC1D9Q6ZT07 1266 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 DRC1Q96MC2 740 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 CRACR2AQ9BSW2 395 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 PRAG1Q86YV5 1406 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 TTC21AQ8NDW8 1320 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 MCM3P25205 808 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 TTF1Q15361 905 aaPredicted RBP13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 RNF41Q9H4P4 317 aaPredicted RBP13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 FAM83GA6ND36 823 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 CCDC150Q8NCX0 1101 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 TBC1D2Q9BYX2 928 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 ECHDC1Q9NTX5 307 aa13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 CWC25Q9NXE8 425 aaPredicted RBP13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 V9GYY5 206 aaPredicted RBP13.92□□□□□ -0.18
ERGIC1-208ENST00000520399 DAAM2Q86T65 1068 aa13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 ANKRD24Q8TF21 1146 aa13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 TCOF1Q13428 1488 aaKnown RBP13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 GSTTP1A0A1W2PQM5 241 aa13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 EIF5P55010 431 aaKnown RBP13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 PTPRKQ15262 1439 aa13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 GOLGA6L9A6NEM1 432 aa13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 SSFA2P28290 1259 aa13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 RPAINQ86UA6 219 aa13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 KIAA0556O60303 1618 aa13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 A2MP01023 1474 aa13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 NUP153P49790 1475 aaKnown RBP13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 CFAP100Q494V2 611 aa13.91□□□□□ -0.18
ERGIC1-208ENST00000520399 IFFO1Q0D2I5 559 aa13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 RNF168Q8IYW5 571 aaPredicted RBP13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 CTCFLQ8NI51 663 aaPredicted RBP13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 GOLGA8BA8MQT2 603 aa13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 WDHD1O75717 1129 aaPredicted RBP13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 IGHDP01880 384 aa13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 MAP9Q49MG5 647 aa13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 ARHGAP45Q92619 1136 aa13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 CRACR2BQ8N4Y2 399 aaPredicted RBP13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 TNPO1Q92973 898 aaKnown RBP13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 CTAGE5O15320 804 aa13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 MICALL1Q8N3F8 863 aa13.9□□□□□ -0.18
ERGIC1-208ENST00000520399 NUCB1Q02818 461 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 RSPH14Q9UHP6 348 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 ZKSCAN5Q9Y2L8 839 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 TEX14Q8IWB6 1497 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 ZNF518AQ6AHZ1 1483 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 SLF2Q8IX21 1173 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 RAB3IL1Q8TBN0 382 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 RPGRQ92834 1020 aaKnown RBP13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 GOPCQ9HD26 462 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 EXOC5O00471 708 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 GJB2P29033 226 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 HDAC1Q13547 482 aaPredicted RBP13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 IQCA1Q86XH1 822 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 MIPOL1Q8TD10 442 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 RANBP6O60518 1105 aaKnown RBP13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 ZNF444Q8N0Y2 327 aaPredicted RBP13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 RSRC1Q96IZ7 334 aaKnown RBP13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 TSG101Q99816 390 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 ASXL2Q76L83 1435 aa13.89□□□□□ -0.19
ERGIC1-208ENST00000520399 SPA17Q15506 151 aa13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 PPP1R42Q7Z4L9 355 aa13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 POTEB2H3BUK9 544 aa13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 FERMT2Q96AC1 680 aa13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 GUCY1B3Q02153 619 aa13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 ADAMTS12P58397 1594 aa13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 IFIT3O14879 490 aaKnown RBP13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 MRPS9P82933 396 aaKnown RBP13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 RIMS2Q9UQ26 1411 aa13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 SNRPA1P09661 255 aaKnown RBP13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
ERGIC1-208ENST00000520399 CCDC178Q5BJE1 867 aa13.87□□□□□ -0.19
ERGIC1-208ENST00000520399 CATIPQ7Z7H3 387 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms